/*
------------------------------------------------------------
create and return an ETree object that holds the front tree.
created -- 96jun23, cca
------------------------------------------------------------
*/
ETree *
MSMD_frontETree (
MSMD *msmd
) {
ETree *etree ;
int front, iv, nfront, nvtx, root ;
int *bndwghts, *fch, *nodwghts, *par, *sib, *vtxToFront ;
MSMDvtx *v, *w ;
/*
---------------
check the input
---------------
*/
if ( msmd == NULL ) {
fprintf(stderr, "\n fatal error in MSMD_frontETree(%p)"
"\n bad input\n", msmd) ;
exit(-1) ;
}
nvtx = msmd->nvtx ;
/*
--------------------------
count the number of fronts
--------------------------
*/
nfront = 0 ;
fch = IVinit(nvtx, -1) ;
sib = IVinit(nvtx, -1) ;
root = -1 ;
for ( iv = 0, v = msmd->vertices ; iv < nvtx ; iv++, v++ ) {
#if MYDEBUG > 0
fprintf(stdout, "\n vertex %d, status %c, wght %d",
v->id, v->status, v->wght) ;
/*
MSMDvtx_print(v, stdout) ;
*/
fflush(stdout) ;
#endif
switch ( v->status ) {
case 'L' :
case 'E' :
if ( (w = v->par) != NULL ) {
sib[v->id] = fch[w->id] ;
fch[w->id] = v->id ;
} else {
sib[v->id] = root ;
root = v->id ;
}
#if MYDEBUG > 0
fprintf(stdout, ", new front %d", nfront) ;
fflush(stdout) ;
#endif
nfront++ ;
break ;
default :
break ;
}
}
#if MYDEBUG > 0
fprintf(stdout, "\n %d fronts", nfront) ;
fflush(stdout) ;
#endif
/*
---------------------------
initialize the ETree object
---------------------------
*/
etree = ETree_new() ;
ETree_init1(etree, nfront, nvtx) ;
nodwghts = IV_entries(etree->nodwghtsIV) ;
bndwghts = IV_entries(etree->bndwghtsIV) ;
vtxToFront = IV_entries(etree->vtxToFrontIV) ;
/*
----------------------------------------------
fill the vtxToFront[] vector so representative
vertices are mapped in a post-order traversal
----------------------------------------------
*/
nfront = 0 ;
iv = root ;
while ( iv != -1 ) {
while ( fch[iv] != -1 ) {
iv = fch[iv] ;
}
v = msmd->vertices + iv ;
vtxToFront[iv] = nfront++ ;
#if MYDEBUG > 0
fprintf(stdout, "\n v = %d, vwght = %d, vtxToFront[%d] = %d",
v->id, v->wght, iv, vtxToFront[iv]) ;
fflush(stdout) ;
#endif
while ( sib[iv] == -1 && v->par != NULL ) {
v = v->par ;
iv = v->id ;
vtxToFront[iv] = nfront++ ;
#if MYDEBUG > 0
fprintf(stdout, "\n v = %d, vwght = %d, vtxToFront[%d] = %d",
v->id, v->wght, iv, vtxToFront[iv]) ;
fflush(stdout) ;
#endif
}
iv = sib[iv] ;
}
IVfree(fch) ;
IVfree(sib) ;
/*
--------------------------------------------------------------
fill in the vertex-to-front map for indistinguishable vertices
--------------------------------------------------------------
*/
for ( iv = 0, v = msmd->vertices ; iv < nvtx ; iv++, v++ ) {
#if MYDEBUG > 0
fprintf(stdout, "\n v %d, wght = %d, status %c",
v->id, v->wght, v->status) ;
fflush(stdout) ;
#endif
switch ( v->status ) {
case 'I' :
#if MYDEBUG > 0
fprintf(stdout, "\n I : v %d", v->id) ;
fflush(stdout) ;
#endif
w = v ;
while ( w->par != NULL && w->status == 'I' ) {
w = w->par ;
#if MYDEBUG > 0
/*
fprintf(stdout, " --> %d", w->id) ;
*/
fprintf(stdout, " %d", w->id) ;
fflush(stdout) ;
#endif
}
#if MYDEBUG > 0
fprintf(stdout, ", w %d, status %c", w->id, w->status) ;
fflush(stdout) ;
#endif
switch ( w->status ) {
case 'L' :
case 'E' :
vtxToFront[v->id] = vtxToFront[w->id] ;
#if MYDEBUG > 0
fprintf(stdout, "\n I: vtxToFront[%d] = %d",
iv, vtxToFront[iv]) ;
fflush(stdout) ;
#endif
break ;
default :
#if MYDEBUG > 0
fprintf(stdout, "\n wow, v->rootpar = %d, status %c",
w->id, w->status) ;
fflush(stdout) ;
#endif
break ;
}
}
}
/*
------------------------------------------------------------
now fill in the parent Tree field, node and boundary weights
------------------------------------------------------------
*/
par = etree->tree->par ;
for ( iv = 0, v = msmd->vertices ; iv < nvtx ; iv++, v++ ) {
#if MYDEBUG > 0
fprintf(stdout, "\n v %d, status %c", v->id, v->status) ;
fflush(stdout) ;
#endif
switch ( v->status ) {
case 'L' :
case 'E' :
front = vtxToFront[iv] ;
#if MYDEBUG > 0
fprintf(stdout, ", front %d", front) ;
fflush(stdout) ;
#endif
if ( (w = v->par) != NULL ) {
par[vtxToFront[v->id]] = vtxToFront[w->id] ;
#if MYDEBUG > 0
fprintf(stdout, ", par[%d] = %d", front, par[front]) ;
fflush(stdout) ;
#endif
}
bndwghts[front] = v->bndwght ;
nodwghts[front] = v->wght ;
break ;
default :
break ;
}
}
/*
-------------------------
set the other tree fields
-------------------------
*/
Tree_setFchSibRoot(etree->tree) ;
return(etree) ; }
/*
---------------------------------------------
purpose -- to broadcast a front tree object
from one process to all the others
created -- 98may21, cca
---------------------------------------------
*/
ETree *
ETree_MPI_Bcast (
ETree *etree,
int root,
int msglvl,
FILE *msgFile,
MPI_Comm comm
) {
int myid, nvtx, nfront, nint ;
int *buffer ;
/*
-------------
find identity
-------------
*/
MPI_Comm_rank(comm, &myid) ;
if ( myid == root ) {
/*
--------------------------------------------
this process owns the front tree, allocate a
continuous buffer and load the data into it.
--------------------------------------------
*/
nfront = ETree_nfront(etree) ;
nvtx = ETree_nvtx(etree) ;
nint = 3 + 5*nfront + nvtx ;
buffer = IVinit(nint, -1) ;
buffer[0] = nfront ;
buffer[1] = nvtx ;
buffer[2] = ETree_root(etree) ;
IVcopy(nfront, buffer + 3, ETree_par(etree)) ;
IVcopy(nfront, buffer + 3 + nfront, ETree_fch(etree)) ;
IVcopy(nfront, buffer + 3 + 2*nfront, ETree_sib(etree)) ;
IVcopy(nfront, buffer + 3 + 3*nfront, ETree_nodwghts(etree)) ;
IVcopy(nfront, buffer + 3 + 4*nfront, ETree_bndwghts(etree)) ;
IVcopy(nvtx, buffer + 3 + 5*nfront, ETree_vtxToFront(etree)) ;
/*
------------------------------------
send the size of the buffer and then
the buffer to the other processors
------------------------------------
*/
MPI_Bcast(&nint, 1, MPI_INT, root, comm) ;
MPI_Bcast(buffer, nint, MPI_INT, root, comm) ;
} else {
/*
--------------------------------------------
this process will receive the front tree.
clear its data, receive the number of int's,
then receive the buffer
--------------------------------------------
*/
if ( etree != NULL ) {
ETree_free(etree) ;
}
MPI_Bcast(&nint, 1, MPI_INT, root, comm) ;
buffer = IVinit(nint, -1) ;
MPI_Bcast(buffer, nint, MPI_INT, root, comm) ;
/*
----------------------------------------
create an ETree object and fill its data
----------------------------------------
*/
etree = ETree_new() ;
nfront = buffer[0] ;
nvtx = buffer[1] ;
ETree_init1(etree, nfront, nvtx) ;
etree->tree->n = nfront ;
etree->tree->root = buffer[2] ;
IVcopy(nfront, ETree_par(etree), buffer + 3) ;
IVcopy(nfront, ETree_fch(etree), buffer + 3 + nfront) ;
IVcopy(nfront, ETree_sib(etree), buffer + 3 + 2*nfront) ;
IVcopy(nfront, ETree_nodwghts(etree), buffer + 3 + 3*nfront) ;
IVcopy(nfront, ETree_bndwghts(etree), buffer + 3 + 4*nfront) ;
IVcopy(nvtx, ETree_vtxToFront(etree), buffer + 3 + 5*nfront) ;
}
/*
---------------
free the buffer
---------------
*/
IVfree(buffer) ;
return(etree) ; }
/*--------------------------------------------------------------------*/
int
main ( int argc, char *argv[] )
/*
------------------------------------------------------
(1) read in an ETree object.
(2) read in an Graph object.
(3) find the optimal domain/schur complement partition
for a semi-implicit factorization
created -- 96oct03, cca
------------------------------------------------------
*/
{
char *inETreeFileName, *inGraphFileName, *outIVfileName ;
double alpha, nA21, nfent1, nfops1, nL11, nL22, nPhi, nV, t1, t2 ;
Graph *graph ;
int ii, inside, J, K, msglvl, nfind1, nfront, nJ, nleaves1,
nnode1, nvtx, rc, sizeJ, totalgain, vsize, v, w ;
int *adjJ, *compids, *nodwghts, *vadj, *vtxToFront, *vwghts ;
IV *compidsIV ;
IVL *symbfacIVL ;
ETree *etree ;
FILE *msgFile ;
Tree *tree ;
if ( argc != 7 ) {
fprintf(stdout,
"\n\n usage : %s msglvl msgFile inETreeFile inGraphFile alpha"
"\n outIVfile "
"\n msglvl -- message level"
"\n msgFile -- message file"
"\n inETreeFile -- input file, must be *.etreef or *.etreeb"
"\n inGraphFile -- input file, must be *.graphf or *.graphb"
"\n alpha -- weight parameter"
"\n alpha = 0 --> minimize storage"
"\n alpha = 1 --> minimize solve ops"
"\n outIVfile -- output file for oldToNew vector,"
"\n must be *.ivf or *.ivb"
"\n", argv[0]) ;
return(0) ;
}
msglvl = atoi(argv[1]) ;
if ( strcmp(argv[2], "stdout") == 0 ) {
msgFile = stdout ;
} else if ( (msgFile = fopen(argv[2], "a")) == NULL ) {
fprintf(stderr, "\n fatal error in %s"
"\n unable to open file %s\n",
argv[0], argv[2]) ;
return(-1) ;
}
inETreeFileName = argv[3] ;
inGraphFileName = argv[4] ;
alpha = atof(argv[5]) ;
outIVfileName = argv[6] ;
fprintf(msgFile,
"\n %s "
"\n msglvl -- %d"
"\n msgFile -- %s"
"\n inETreeFile -- %s"
"\n inGraphFile -- %s"
"\n alpha -- %f"
"\n outIVfile -- %s"
"\n",
argv[0], msglvl, argv[2],
inETreeFileName, inGraphFileName, alpha, outIVfileName) ;
fflush(msgFile) ;
/*
------------------------
read in the ETree object
------------------------
*/
if ( strcmp(inETreeFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
spoolesFatal();
}
etree = ETree_new() ;
MARKTIME(t1) ;
rc = ETree_readFromFile(etree, inETreeFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in etree from file %s",
t2 - t1, inETreeFileName) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from ETree_readFromFile(%p,%s)",
rc, etree, inETreeFileName) ;
spoolesFatal();
}
ETree_leftJustify(etree) ;
fprintf(msgFile, "\n\n after reading ETree object from file %s",
inETreeFileName) ;
if ( msglvl > 2 ) {
ETree_writeForHumanEye(etree, msgFile) ;
} else {
ETree_writeStats(etree, msgFile) ;
}
fflush(msgFile) ;
nfront = ETree_nfront(etree) ;
tree = ETree_tree(etree) ;
nodwghts = ETree_nodwghts(etree) ;
vtxToFront = ETree_vtxToFront(etree) ;
/*
------------------------
read in the Graph object
------------------------
*/
if ( strcmp(inGraphFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
spoolesFatal();
}
graph = Graph_new() ;
MARKTIME(t1) ;
rc = Graph_readFromFile(graph, inGraphFileName) ;
nvtx = graph->nvtx ;
vwghts = graph->vwghts ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in graph from file %s",
t2 - t1, inGraphFileName) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from Graph_readFromFile(%p,%s)",
rc, graph, inGraphFileName) ;
spoolesFatal();
}
fprintf(msgFile, "\n\n after reading Graph object from file %s",
inGraphFileName) ;
if ( msglvl > 2 ) {
Graph_writeForHumanEye(graph, msgFile) ;
} else {
Graph_writeStats(graph, msgFile) ;
}
fflush(msgFile) ;
/*
----------------------
compute the statistics
----------------------
*/
nnode1 = etree->tree->n ;
nfind1 = ETree_nFactorIndices(etree) ;
nfent1 = ETree_nFactorEntries(etree, SPOOLES_SYMMETRIC) ;
nfops1 = ETree_nFactorOps(etree, SPOOLES_REAL, SPOOLES_SYMMETRIC) ;
nleaves1 = Tree_nleaves(etree->tree) ;
fprintf(stdout, "\n root front %d has %d vertices",
etree->tree->root,
etree->nodwghtsIV->vec[etree->tree->root]) ;
/*
---------------------------------
create the symbolic factorization
---------------------------------
*/
symbfacIVL = SymbFac_initFromGraph(etree, graph) ;
if ( msglvl > 2 ) {
IVL_writeForHumanEye(symbfacIVL, msgFile) ;
} else {
IVL_writeStats(symbfacIVL, msgFile) ;
}
fflush(msgFile) ;
/*
--------------------------
find the optimal partition
--------------------------
*/
compidsIV = ETree_optPart(etree, graph, symbfacIVL, alpha,
&totalgain, msglvl, msgFile) ;
if ( msglvl > 2 ) {
IV_writeForHumanEye(compidsIV, msgFile) ;
} else {
IV_writeStats(compidsIV, msgFile) ;
}
fflush(msgFile) ;
compids = IV_entries(compidsIV) ;
/*
------------------------------------------------------
compute the number of vertices in the schur complement
------------------------------------------------------
*/
for ( J = 0, nPhi = nV = 0. ; J < nfront ; J++ ) {
if ( compids[J] == 0 ) {
nPhi += nodwghts[J] ;
}
nV += nodwghts[J] ;
}
/*
--------------------------------------------
compute the number of entries in L11 and L22
--------------------------------------------
*/
nL11 = nL22 = 0 ;
for ( J = Tree_postOTfirst(tree) ;
J != -1 ;
J = Tree_postOTnext(tree, J) ) {
nJ = nodwghts[J] ;
if ( msglvl > 3 ) {
fprintf(msgFile, "\n\n front %d, nJ = %d", J, nJ) ;
}
IVL_listAndSize(symbfacIVL, J, &sizeJ, &adjJ) ;
for ( ii = 0, inside = 0 ; ii < sizeJ ; ii++ ) {
w = adjJ[ii] ;
K = vtxToFront[w] ;
if ( msglvl > 3 ) {
fprintf(msgFile, "\n w = %d, K = %d", w, K) ;
}
if ( K > J && compids[K] == compids[J] ) {
inside += (vwghts == NULL) ? 1 : vwghts[w] ;
if ( msglvl > 3 ) {
fprintf(msgFile, ", inside") ;
}
}
}
if ( compids[J] != 0 ) {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n inside = %d, adding %d to L11",
inside, nJ*nJ + 2*nJ*inside) ;
}
nL11 += (nJ*(nJ+1))/2 + nJ*inside ;
} else {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n inside = %d, adding %d to L22",
inside, (nJ*(nJ+1))/2 + nJ*inside) ;
}
nL22 += (nJ*(nJ+1))/2 + nJ*inside ;
}
}
if ( msglvl > 0 ) {
fprintf(msgFile, "\n |L| = %.0f, |L11| = %.0f, |L22| = %.0f",
nfent1, nL11, nL22) ;
}
/*
------------------------------------
compute the number of entries in A21
------------------------------------
*/
nA21 = 0 ;
if ( vwghts != NULL ) {
for ( v = 0 ; v < nvtx ; v++ ) {
J = vtxToFront[v] ;
if ( compids[J] != 0 ) {
Graph_adjAndSize(graph, v, &vsize, &vadj) ;
for ( ii = 0 ; ii < vsize ; ii++ ) {
w = vadj[ii] ;
K = vtxToFront[w] ;
if ( compids[K] == 0 ) {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n A21 : v = %d, w = %d", v, w) ;
}
nA21 += vwghts[v] * vwghts[w] ;
}
}
}
}
} else {
for ( v = 0 ; v < nvtx ; v++ ) {
J = vtxToFront[v] ;
if ( compids[J] != 0 ) {
Graph_adjAndSize(graph, v, &vsize, &vadj) ;
for ( ii = 0 ; ii < vsize ; ii++ ) {
w = vadj[ii] ;
K = vtxToFront[w] ;
if ( compids[K] == 0 ) {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n A21 : v = %d, w = %d", v, w) ;
}
nA21++ ;
}
}
}
}
}
if ( msglvl > 0 ) {
fprintf(msgFile,
"\n |L| = %.0f, |L11| = %.0f, |L22| = %.0f, |A21| = %.0f",
nfent1, nL11, nL22, nA21) ;
fprintf(msgFile,
"\n storage: explicit = %.0f, semi-implicit = %.0f, ratio = %.3f"
"\n opcount: explicit = %.0f, semi-implicit = %.0f, ratio = %.3f",
nfent1, nL11 + nA21 + nL22,
nfent1/(nL11 + nA21 + nL22),
2*nfent1, 4*nL11 + 2*nA21 + 2*nL22,
2*nfent1/(4*nL11 + 2*nA21 + 2*nL22)) ;
fprintf(msgFile, "\n ratios %8.3f %8.3f %8.3f",
nPhi/nV,
nfent1/(nL11 + nA21 + nL22),
2*nfent1/(4*nL11 + 2*nA21 + 2*nL22)) ;
}
/*
----------------
free the objects
----------------
*/
ETree_free(etree) ;
Graph_free(graph) ;
IVL_free(symbfacIVL) ;
fprintf(msgFile, "\n") ;
fclose(msgFile) ;
return(1) ; }
/*--------------------------------------------------------------------*/
int
main ( int argc, char *argv[] )
/*
------------------------------------------------------------
make ETree objects for nested dissection on a regular grid
1 -- vertex elimination tree
2 -- fundamental supernode front tree
3 -- merge only children if possible
4 -- merge all children if possible
5 -- split large non-leaf fronts
created -- 98feb05, cca
------------------------------------------------------------
*/
{
char *outETreeFileName ;
double ops[6] ;
double t1, t2 ;
EGraph *egraph ;
ETree *etree0, *etree1, *etree2, *etree3, *etree4, *etree5 ;
FILE *msgFile ;
Graph *graph ;
int nfronts[6], nfind[6], nzf[6] ;
int maxsize, maxzeros, msglvl, n1, n2, n3, nvtx, rc, v ;
int *newToOld, *oldToNew ;
IV *nzerosIV ;
if ( argc != 9 ) {
fprintf(stdout,
"\n\n usage : %s msglvl msgFile n1 n2 n3 maxzeros maxsize outFile"
"\n msglvl -- message level"
"\n msgFile -- message file"
"\n n1 -- number of points in the first direction"
"\n n2 -- number of points in the second direction"
"\n n3 -- number of points in the third direction"
"\n maxzeros -- number of points in the third direction"
"\n maxsize -- maximum number of vertices in a front"
"\n outFile -- output file, must be *.etreef or *.etreeb"
"\n", argv[0]) ;
return(0) ;
}
msglvl = atoi(argv[1]) ;
if ( strcmp(argv[2], "stdout") == 0 ) {
msgFile = stdout ;
} else if ( (msgFile = fopen(argv[2], "a")) == NULL ) {
fprintf(stderr, "\n fatal error in %s"
"\n unable to open file %s\n",
argv[0], argv[2]) ;
return(-1) ;
}
n1 = atoi(argv[3]) ;
n2 = atoi(argv[4]) ;
n3 = atoi(argv[5]) ;
maxzeros = atoi(argv[6]) ;
maxsize = atoi(argv[7]) ;
outETreeFileName = argv[8] ;
fprintf(msgFile,
"\n %s "
"\n msglvl -- %d"
"\n msgFile -- %s"
"\n n1 -- %d"
"\n n2 -- %d"
"\n n3 -- %d"
"\n maxzeros -- %d"
"\n maxsize -- %d"
"\n outFile -- %s"
"\n",
argv[0], msglvl, argv[2], n1, n2, n3,
maxzeros, maxsize, outETreeFileName) ;
fflush(msgFile) ;
/*
----------------------------
create the grid graph object
----------------------------
*/
if ( n1 == 1 ) {
egraph = EGraph_make9P(n2, n3, 1) ;
} else if ( n2 == 1 ) {
egraph = EGraph_make9P(n1, n3, 1) ;
} else if ( n3 == 1 ) {
egraph = EGraph_make9P(n1, n2, 1) ;
} else {
egraph = EGraph_make27P(n1, n2, n3, 1) ;
}
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n %d x %d x %d grid EGraph", n1, n2, n3) ;
EGraph_writeForHumanEye(egraph, msgFile) ;
fflush(msgFile) ;
}
graph = EGraph_mkAdjGraph(egraph) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n %d x %d x %d grid Graph", n1, n2, n3) ;
Graph_writeForHumanEye(graph, msgFile) ;
fflush(msgFile) ;
}
/*
----------------------------------
get the nested dissection ordering
----------------------------------
*/
nvtx = n1*n2*n3 ;
newToOld = IVinit(nvtx, -1) ;
oldToNew = IVinit(nvtx, -1) ;
mkNDperm(n1, n2, n3, newToOld, 0, n1-1, 0, n2-1, 0, n3-1) ;
for ( v = 0 ; v < nvtx ; v++ ) {
oldToNew[newToOld[v]] = v ;
}
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n %d x %d x %d nd ordering", n1, n2, n3) ;
IVfprintf(msgFile, nvtx, oldToNew) ;
fflush(msgFile) ;
}
/*
------------------------------------------
create the vertex elimination ETree object
------------------------------------------
*/
etree0 = ETree_new() ;
ETree_initFromGraphWithPerms(etree0, graph, newToOld, oldToNew) ;
nfronts[0] = ETree_nfront(etree0) ;
nfind[0] = ETree_nFactorIndices(etree0) ;
nzf[0] = ETree_nFactorEntries(etree0, SPOOLES_SYMMETRIC) ;
ops[0] = ETree_nFactorOps(etree0, SPOOLES_REAL, SPOOLES_SYMMETRIC) ;
fprintf(msgFile,
"\n vtx tree : %8d fronts, %8d indices, %8d |L|, %12.0f ops",
nfronts[0], nfind[0], nzf[0], ops[0]) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n vertex elimination tree") ;
ETree_writeForHumanEye(etree0, msgFile) ;
fflush(msgFile) ;
}
/*
---------------------------------------------
create the fundamental supernode ETree object
---------------------------------------------
*/
nzerosIV = IV_new() ;
IV_init(nzerosIV, nvtx, NULL) ;
IV_fill(nzerosIV, 0) ;
etree1 = ETree_mergeFrontsOne(etree0, 0, nzerosIV) ;
nfronts[1] = ETree_nfront(etree1) ;
nfind[1] = ETree_nFactorIndices(etree1) ;
nzf[1] = ETree_nFactorEntries(etree1, SPOOLES_SYMMETRIC) ;
ops[1] = ETree_nFactorOps(etree1, SPOOLES_REAL, SPOOLES_SYMMETRIC) ;
fprintf(msgFile,
"\n fs tree : %8d fronts, %8d indices, %8d |L|, %12.0f ops",
nfronts[1], nfind[1], nzf[1], ops[1]) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n fundamental supernode front tree") ;
ETree_writeForHumanEye(etree1, msgFile) ;
fprintf(msgFile, "\n\n nzerosIV") ;
IV_writeForHumanEye(nzerosIV, msgFile) ;
fflush(msgFile) ;
}
/*
---------------------------
try to absorb only children
---------------------------
*/
etree2 = ETree_mergeFrontsOne(etree1, maxzeros, nzerosIV) ;
nfronts[2] = ETree_nfront(etree2) ;
nfind[2] = ETree_nFactorIndices(etree2) ;
nzf[2] = ETree_nFactorEntries(etree2, SPOOLES_SYMMETRIC) ;
ops[2] = ETree_nFactorOps(etree2, SPOOLES_REAL, SPOOLES_SYMMETRIC) ;
fprintf(msgFile,
"\n merge one : %8d fronts, %8d indices, %8d |L|, %12.0f ops",
nfronts[2], nfind[2], nzf[2], ops[2]) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n front tree after mergeOne") ;
ETree_writeForHumanEye(etree2, msgFile) ;
fprintf(msgFile, "\n\n nzerosIV") ;
IV_writeForHumanEye(nzerosIV, msgFile) ;
fflush(msgFile) ;
}
/*
--------------------------
try to absorb all children
--------------------------
*/
etree3 = ETree_mergeFrontsAll(etree2, maxzeros, nzerosIV) ;
nfronts[3] = ETree_nfront(etree3) ;
nfind[3] = ETree_nFactorIndices(etree3) ;
nzf[3] = ETree_nFactorEntries(etree3, SPOOLES_SYMMETRIC) ;
ops[3] = ETree_nFactorOps(etree3, SPOOLES_REAL, SPOOLES_SYMMETRIC) ;
fprintf(msgFile,
"\n merge all : %8d fronts, %8d indices, %8d |L|, %12.0f ops",
nfronts[3], nfind[3], nzf[3], ops[3]) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n front tree after mergeAll") ;
ETree_writeForHumanEye(etree3, msgFile) ;
fprintf(msgFile, "\n\n nzerosIV") ;
IV_writeForHumanEye(nzerosIV, msgFile) ;
fflush(msgFile) ;
}
/*
--------------------------------
try to absorb any other children
--------------------------------
*/
etree4 = etree3 ;
/*
etree4 = ETree_mergeFrontsAny(etree3, maxzeros, nzerosIV) ;
nfronts[4] = ETree_nfront(etree4) ;
nfind[4] = ETree_nFactorIndices(etree4) ;
nzf[4] = ETree_nFactorEntries(etree4, SPOOLES_SYMMETRIC) ;
ops[4] = ETree_nFactorOps(etree4, SPOOLES_REAL, SPOOLES_SYMMETRIC) ;
fprintf(msgFile,
"\n merge any : %8d fronts, %8d indices, %8d |L|, %12.0f ops",
nfronts[4], nfind[4], nzf[4], ops[4]) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n front tree after mergeAny") ;
ETree_writeForHumanEye(etree3, msgFile) ;
fprintf(msgFile, "\n\n nzerosIV") ;
IV_writeForHumanEye(nzerosIV, msgFile) ;
fflush(msgFile) ;
}
*/
/*
--------------------
split the front tree
--------------------
*/
etree5 = ETree_splitFronts(etree4, NULL, maxsize, 0) ;
nfronts[5] = ETree_nfront(etree5) ;
nfind[5] = ETree_nFactorIndices(etree5) ;
nzf[5] = ETree_nFactorEntries(etree5, SPOOLES_SYMMETRIC) ;
ops[5] = ETree_nFactorOps(etree5, SPOOLES_REAL, SPOOLES_SYMMETRIC) ;
fprintf(msgFile,
"\n split : %8d fronts, %8d indices, %8d |L|, %12.0f ops",
nfronts[5], nfind[5], nzf[5], ops[5]) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n front tree after split") ;
ETree_writeForHumanEye(etree4, msgFile) ;
fflush(msgFile) ;
}
fprintf(msgFile, "\n\n complex symmetric ops %.0f",
ETree_nFactorOps(etree5, SPOOLES_COMPLEX, SPOOLES_SYMMETRIC)) ;
/*
--------------------------
write out the ETree object
--------------------------
*/
if ( strcmp(outETreeFileName, "none") != 0 ) {
MARKTIME(t1) ;
rc = ETree_writeToFile(etree5, outETreeFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : write etree to file %s",
t2 - t1, outETreeFileName) ;
if ( rc != 1 ) {
fprintf(msgFile,
"\n return value %d from ETree_writeToFile(%p,%s)",
rc, etree5, outETreeFileName) ;
}
}
/*
----------------
free the objects
----------------
*/
ETree_free(etree0) ;
ETree_free(etree1) ;
ETree_free(etree2) ;
ETree_free(etree3) ;
/*
ETree_free(etree4) ;
*/
ETree_free(etree5) ;
EGraph_free(egraph) ;
Graph_free(graph) ;
IVfree(newToOld) ;
IVfree(oldToNew) ;
IV_free(nzerosIV) ;
fprintf(msgFile, "\n") ;
fclose(msgFile) ;
return(1) ; }
/*--------------------------------------------------------------------*/
int
main ( int argc, char *argv[] )
/*
---------------------------------------------------------------
read in a ETree object, create an IV object with the same size,
mark the vertices in the top level separator(s), write the IV
object to a file
created -- 96may02, cca
---------------------------------------------------------------
*/
{
char *inETreeFileName, *outIVfileName ;
double t1, t2 ;
int msglvl, rc, J, K, ncomp, nfront, nvtx, v ;
int *bndwghts, *compids, *fch, *map, *nodwghts,
*par, *sib, *vtxToFront ;
IV *compidsIV, *mapIV ;
ETree *etree ;
FILE *msgFile ;
Tree *tree ;
if ( argc != 5 ) {
fprintf(stdout,
"\n\n usage : %s msglvl msgFile inETreeFile outIVfile"
"\n msglvl -- message level"
"\n msgFile -- message file"
"\n inETreeFile -- input file, must be *.etreef or *.etreeb"
"\n outIVfile -- output file, must be *.ivf or *.ivb"
"\n", argv[0]) ;
return(0) ;
}
msglvl = atoi(argv[1]) ;
if ( strcmp(argv[2], "stdout") == 0 ) {
msgFile = stdout ;
} else if ( (msgFile = fopen(argv[2], "a")) == NULL ) {
fprintf(stderr, "\n fatal error in %s"
"\n unable to open file %s\n",
argv[0], argv[2]) ;
return(-1) ;
}
inETreeFileName = argv[3] ;
outIVfileName = argv[4] ;
fprintf(msgFile,
"\n %s "
"\n msglvl -- %d"
"\n msgFile -- %s"
"\n inETreeFile -- %s"
"\n outIVfile -- %s"
"\n",
argv[0], msglvl, argv[2], inETreeFileName, outIVfileName) ;
fflush(msgFile) ;
/*
------------------------
read in the ETree object
------------------------
*/
if ( strcmp(inETreeFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
etree = ETree_new() ;
MARKTIME(t1) ;
rc = ETree_readFromFile(etree, inETreeFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in etree from file %s",
t2 - t1, inETreeFileName) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from ETree_readFromFile(%p,%s)",
rc, etree, inETreeFileName) ;
exit(-1) ;
}
fprintf(msgFile, "\n\n after reading ETree object from file %s",
inETreeFileName) ;
if ( msglvl > 2 ) {
ETree_writeForHumanEye(etree, msgFile) ;
} else {
ETree_writeStats(etree, msgFile) ;
}
fflush(msgFile) ;
nfront = ETree_nfront(etree) ;
nvtx = ETree_nvtx(etree) ;
bndwghts = ETree_bndwghts(etree) ;
vtxToFront = ETree_vtxToFront(etree) ;
nodwghts = ETree_nodwghts(etree) ;
par = ETree_par(etree) ;
fch = ETree_fch(etree) ;
sib = ETree_sib(etree) ;
tree = ETree_tree(etree) ;
/*
-----------------------------------------
create the map from fronts to components,
top level separator(s) are component zero
-----------------------------------------
*/
mapIV = IV_new() ;
IV_init(mapIV, nfront, NULL) ;
map = IV_entries(mapIV) ;
ncomp = 0 ;
for ( J = Tree_preOTfirst(tree) ;
J != -1 ;
J = Tree_preOTnext(tree, J) ) {
if ( (K = par[J]) == -1 ) {
map[J] = 0 ;
} else if ( map[K] != 0 ) {
map[J] = map[K] ;
} else if ( J == fch[K] && sib[J] == -1
&& bndwghts[J] == nodwghts[K] + bndwghts[K] ) {
map[J] = 0 ;
} else {
map[J] = ++ncomp ;
}
}
fprintf(msgFile, "\n\n mapIV object") ;
if ( msglvl > 2 ) {
IV_writeForHumanEye(mapIV, msgFile) ;
} else {
IV_writeStats(mapIV, msgFile) ;
}
/*
----------------------------------------
fill the map from vertices to components
----------------------------------------
*/
compidsIV = IV_new() ;
IV_init(compidsIV, nvtx, NULL) ;
compids = IV_entries(compidsIV) ;
for ( v = 0 ; v < nvtx ; v++ ) {
compids[v] = map[vtxToFront[v]] ;
}
fprintf(msgFile, "\n\n compidsIV object") ;
if ( msglvl > 2 ) {
IV_writeForHumanEye(compidsIV, msgFile) ;
} else {
IV_writeStats(compidsIV, msgFile) ;
}
fflush(msgFile) ;
/*
-----------------------
write out the IV object
-----------------------
*/
if ( strcmp(outIVfileName, "none") != 0 ) {
MARKTIME(t1) ;
rc = IV_writeToFile(compidsIV, outIVfileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : write etree to file %s",
t2 - t1, outIVfileName) ;
}
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from IV_writeToFile(%p,%s)",
rc, compidsIV, outIVfileName) ;
}
/*
----------------
free the objects
----------------
*/
ETree_free(etree) ;
IV_free(mapIV) ;
IV_free(compidsIV) ;
fprintf(msgFile, "\n") ;
fclose(msgFile) ;
return(1) ; }
/*
--------------------------------------------------------------------
purpose -- to fill submtx with a submatrix of the front matrix.
the fronts that form the submatrix are found in frontidsIV.
all information in submtx is local, front #'s are from 0 to
one less than the number of fronts in the submatrix, equation
#'s are from 0 to one less than the number of rows and columns
in the submatrix. the global row and column ids for the submatrix
are stored in rowsIV and colsIV on return.
return values ---
1 -- normal return
-1 -- submtx is NULL
-2 -- frontmtx is NULL
-3 -- frontmtx is not in 2-D mode
-4 -- frontidsIV is NULL
-5 -- frontidsIV is invalid
-6 -- rowsIV is NULL
-7 -- colsIV is NULL
-8 -- unable to create front tree
-9 -- unable to create symbfacIVL
-10 -- unable to create coladjIVL
-11 -- unable to create rowadjIVL
-12 -- unable to create upperblockIVL
-13 -- unable to create lowerblockIVL
created -- 98oct17, cca
--------------------------------------------------------------------
*/
int
FrontMtx_initFromSubmatrix (
FrontMtx *submtx,
FrontMtx *frontmtx,
IV *frontidsIV,
IV *rowsIV,
IV *colsIV,
int msglvl,
FILE *msgFile
) {
ETree *etreeSub ;
int ii, J, Jsub, K, Ksub, ncol, nfront, nfrontSub, neqnSub, nJ,
nrow, offset, rc, size, vSub ;
int *bndwghts, *colind, *colmap, *cols, *frontSubIds,
*list, *nodwghts, *rowind, *rowmap, *rows ;
IV *frontsizesIVsub, *vtxIV ;
IVL *coladjIVLsub, *lowerblockIVLsub, *rowadjIVLsub,
*symbfacIVLsub, *upperblockIVLsub ;
SubMtx *mtx ;
/*
---------------
check the input
---------------
*/
if ( submtx == NULL ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n submtx is NULL\n") ;
return(-1) ;
}
if ( frontmtx == NULL ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n frontmtx is NULL\n") ;
return(-2) ;
}
if ( ! FRONTMTX_IS_2D_MODE(frontmtx) ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n frontmtx mode is not 2D\n") ;
return(-3) ;
}
if ( frontidsIV == NULL ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n frontidsIV is NULL\n") ;
return(-4) ;
}
nfront = FrontMtx_nfront(frontmtx) ;
IV_sizeAndEntries(frontidsIV, &nfrontSub, &frontSubIds) ;
if ( nfrontSub < 0 || nfrontSub > nfront ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n invalid frontidsIV"
"\n nfrontSub = %d, nfront %d\n", nfrontSub, nfront) ;
return(-5) ;
}
for ( ii = 0 ; ii < nfrontSub ; ii++ ) {
if ( (J = frontSubIds[ii]) < 0 || J >= nfront ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n invalid frontidsIV"
"\n frontSubIds[%d] = %d, nfront = %d\n",
ii, J, nfront) ;
return(-5) ;
}
}
if ( rowsIV == NULL ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n rowsIV is NULL\n") ;
return(-6) ;
}
if ( colsIV == NULL ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n colsIV is NULL\n") ;
return(-7) ;
}
/*--------------------------------------------------------------------*/
/*
-----------------------------------------------------
clear the data for the submatrix and set the
scalar values (some inherited from the global matrix)
-----------------------------------------------------
*/
FrontMtx_clearData(submtx) ;
submtx->nfront = nfrontSub ;
submtx->type = frontmtx->type ;
submtx->symmetryflag = frontmtx->symmetryflag ;
submtx->sparsityflag = frontmtx->sparsityflag ;
submtx->pivotingflag = frontmtx->pivotingflag ;
submtx->dataMode = FRONTMTX_2D_MODE ;
/*
---------------------------------------------------------------
initialize the front tree for the submatrix.
note: on return, vtxIV is filled with the vertices originally
in the submatrix, (pivoting may change this), needed to find
symbolic factorization IVL object
note: at return, the boundary weights are likely to be invalid,
since we have no way of knowing what boundary indices for a
front are really in the domain. this will be changed after we
have the symbolic factorization.
---------------------------------------------------------------
*/
etreeSub = submtx->frontETree = ETree_new() ;
vtxIV = IV_new() ;
rc = ETree_initFromSubtree(etreeSub, frontidsIV,
frontmtx->frontETree, vtxIV) ;
if ( rc != 1 ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n unable to create submatrix's front ETree, rc = %d\n", rc) ;
return(-8) ;
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n submatrix ETree") ;
ETree_writeForHumanEye(etreeSub, msgFile) ;
fprintf(msgFile, "\n\n submatrix original equations") ;
IV_writeForHumanEye(vtxIV, msgFile) ;
fflush(msgFile) ;
}
/*
------------------------------------------------------
set the # of equations (perhap temporarily if pivoting
has delayed some rows and columns), and the tree.
------------------------------------------------------
*/
submtx->neqns = neqnSub = IV_size(vtxIV) ;
submtx->tree = etreeSub->tree ;
/*
-----------------------------------------------------
initialize the symbolic factorization for the subtree
-----------------------------------------------------
*/
symbfacIVLsub = submtx->symbfacIVL = IVL_new() ;
rc = IVL_initFromSubIVL(symbfacIVLsub, frontmtx->symbfacIVL,
frontidsIV, vtxIV) ;
if ( rc != 1 ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n unable to create submatrix's symbfac, rc = %d\n", rc) ;
return(-9) ;
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n submatrix symbolic factorizatio") ;
IVL_writeForHumanEye(symbfacIVLsub, msgFile) ;
fflush(msgFile) ;
}
/*
---------------------------------------------
adjust the boundary weights of the front tree
---------------------------------------------
*/
nodwghts = ETree_nodwghts(etreeSub) ;
bndwghts = ETree_bndwghts(etreeSub) ;
for ( J = 0 ; J < nfrontSub ; J++ ) {
IVL_listAndSize(symbfacIVLsub, J, &size, &list) ;
bndwghts[J] = size - nodwghts[J] ;
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n submatrix ETree after bndweight adjustment") ;
ETree_writeForHumanEye(etreeSub, msgFile) ;
fflush(msgFile) ;
}
/*
-------------------------------------
set the front sizes for the submatrix
-------------------------------------
*/
frontsizesIVsub = submtx->frontsizesIV = IV_new() ;
IV_init(frontsizesIVsub, nfrontSub, NULL) ;
IVgather(nfrontSub, IV_entries(frontsizesIVsub),
IV_entries(frontmtx->frontsizesIV),
IV_entries(frontidsIV)) ;
neqnSub = submtx->neqns = IV_sum(frontsizesIVsub) ;
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n %d equations in submatrix", neqnSub) ;
fprintf(msgFile, "\n\n front sizes for submatrix") ;
IV_writeForHumanEye(frontsizesIVsub, msgFile) ;
fflush(msgFile) ;
}
/*
-------------------------------------------------------------------
fill rowsIV and colsIV with the row and column ids of the submatrix
-------------------------------------------------------------------
*/
IV_setSize(rowsIV, neqnSub) ;
IV_setSize(colsIV, neqnSub) ;
rows = IV_entries(rowsIV) ;
cols = IV_entries(colsIV) ;
for ( Jsub = offset = 0 ; Jsub < nfrontSub ; Jsub++ ) {
if ( (nJ = FrontMtx_frontSize(submtx, Jsub)) > 0 ) {
J = frontSubIds[Jsub] ;
FrontMtx_columnIndices(frontmtx, J, &size, &list) ;
IVcopy(nJ, cols + offset, list) ;
FrontMtx_rowIndices(frontmtx, J, &size, &list) ;
IVcopy(nJ, rows + offset, list) ;
offset += nJ ;
}
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n row ids for submatrix") ;
IV_writeForHumanEye(rowsIV, msgFile) ;
fprintf(msgFile, "\n\n column ids for submatrix") ;
IV_writeForHumanEye(colsIV, msgFile) ;
fflush(msgFile) ;
}
/*
----------------------------------
get the row and column adjacencies
----------------------------------
*/
if ( FRONTMTX_IS_PIVOTING(frontmtx) ) {
submtx->neqns = neqnSub ;
coladjIVLsub = submtx->coladjIVL = IVL_new() ;
rc = IVL_initFromSubIVL(coladjIVLsub, frontmtx->coladjIVL,
frontidsIV, colsIV) ;
if ( rc != 1 ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n unable to create submatrix's coladjIVL, rc = %d\n", rc) ;
return(-10) ;
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n submatrix col adjacency") ;
IVL_writeForHumanEye(coladjIVLsub, msgFile) ;
fflush(msgFile) ;
}
if ( FRONTMTX_IS_NONSYMMETRIC(frontmtx) ) {
rowadjIVLsub = submtx->rowadjIVL = IVL_new() ;
rc = IVL_initFromSubIVL(rowadjIVLsub, frontmtx->rowadjIVL,
frontidsIV, rowsIV) ;
if ( rc != 1 ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n unable to create submatrix's rowadjIVL, rc = %d\n", rc) ;
return(-11) ;
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n submatrix row adjacency") ;
IVL_writeForHumanEye(rowadjIVLsub, msgFile) ;
fflush(msgFile) ;
}
}
}
IV_free(vtxIV) ;
/*
----------------------------------------------
get the rowmap[] and colmap[] vectors,
needed to translate indices in the submatrices
----------------------------------------------
*/
colmap = IVinit(frontmtx->neqns, -1) ;
for ( ii = 0 ; ii < neqnSub ; ii++ ) {
colmap[cols[ii]] = ii ;
}
if ( FRONTMTX_IS_NONSYMMETRIC(frontmtx) ) {
rowmap = IVinit(frontmtx->neqns, -1) ;
for ( ii = 0 ; ii < neqnSub ; ii++ ) {
rowmap[rows[ii]] = ii ;
}
} else {
rowmap = colmap ;
}
/*
-----------------------------------------------------------
get the upper and lower block IVL objects for the submatrix
-----------------------------------------------------------
*/
upperblockIVLsub = submtx->upperblockIVL = IVL_new() ;
rc = IVL_initFromSubIVL(upperblockIVLsub, frontmtx->upperblockIVL,
frontidsIV, frontidsIV) ;
if ( rc != 1 ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n unable to create upperblockIVL, rc = %d\n", rc) ;
return(-12) ;
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n upper block adjacency IVL object") ;
IVL_writeForHumanEye(upperblockIVLsub, msgFile) ;
fflush(msgFile) ;
}
if ( FRONTMTX_IS_NONSYMMETRIC(frontmtx) ) {
lowerblockIVLsub = submtx->lowerblockIVL = IVL_new() ;
rc = IVL_initFromSubIVL(lowerblockIVLsub, frontmtx->lowerblockIVL,
frontidsIV, frontidsIV) ;
if ( rc != 1 ) {
fprintf(stderr, "\n error in FrontMtx_initFromSubmatrix()"
"\n unable to create lowerblockIVL, rc = %d\n", rc) ;
return(-13) ;
}
if ( msglvl > 4 ) {
fprintf(msgFile, "\n\n lower block adjacency IVL object") ;
IVL_writeForHumanEye(lowerblockIVLsub, msgFile) ;
fflush(msgFile) ;
}
}
/*
----------------------------------------------------------------
allocate the vector and hash table(s) for the factor submatrices
----------------------------------------------------------------
*/
ALLOCATE(submtx->p_mtxDJJ, struct _SubMtx *, nfrontSub) ;
for ( J = 0 ; J < nfrontSub ; J++ ) {
submtx->p_mtxDJJ[J] = NULL ;
}
submtx->upperhash = I2Ohash_new() ;
I2Ohash_init(submtx->upperhash, nfrontSub, nfrontSub, nfrontSub) ;
if ( FRONTMTX_IS_NONSYMMETRIC(frontmtx) ) {
submtx->lowerhash = I2Ohash_new() ;
I2Ohash_init(submtx->lowerhash, nfrontSub, nfrontSub, nfrontSub) ;
}
/*
-----------------------------------------------------------------
remove the diagonal submatrices from the factor matrix
and insert into the submatrix object. note: front row and column
ids must be changed to their local values, and the row and column
indices must be mapped to local indices.
-----------------------------------------------------------------
*/
for ( Jsub = 0 ; Jsub < nfrontSub ; Jsub++ ) {
J = frontSubIds[Jsub] ;
if ( (mtx = frontmtx->p_mtxDJJ[J]) != NULL ) {
SubMtx_setIds(mtx, Jsub, Jsub) ;
SubMtx_columnIndices(mtx, &ncol, &colind) ;
IVgather(ncol, colind, colmap, colind) ;
SubMtx_rowIndices(mtx, &nrow, &rowind) ;
IVgather(nrow, rowind, rowmap, rowind) ;
submtx->p_mtxDJJ[Jsub] = mtx ;
frontmtx->p_mtxDJJ[J] = NULL ;
submtx->nentD += mtx->nent ;
}
}
/*
----------------------------------------------------------------
remove the upper triangular submatrices from the factor matrix
and insert into the submatrix object. note: front row and column
ids must be changed to their local values. if the matrix is on
the diagonal, i.e., U(J,J), its row and column indices must be
mapped to local indices.
----------------------------------------------------------------
*/
for ( Jsub = 0 ; Jsub < nfrontSub ; Jsub++ ) {
J = frontSubIds[Jsub] ;
FrontMtx_upperAdjFronts(submtx, Jsub, &size, &list) ;
for ( ii = 0 ; ii < size ; ii++ ) {
Ksub = list[ii] ;
K = frontSubIds[Ksub] ;
if ( 1 == I2Ohash_remove(frontmtx->upperhash,
J, K, (void *) &mtx) ) {
SubMtx_setIds(mtx, Jsub, Ksub) ;
if ( K == J ) {
SubMtx_columnIndices(mtx, &ncol, &colind) ;
IVgather(ncol, colind, colmap, colind) ;
SubMtx_rowIndices(mtx, &nrow, &rowind) ;
IVgather(nrow, rowind, rowmap, rowind) ;
}
I2Ohash_insert(submtx->upperhash, Jsub, Ksub, (void *) mtx) ;
submtx->nentU += mtx->nent ;
}
}
}
if ( FRONTMTX_IS_NONSYMMETRIC(frontmtx) ) {
/*
----------------------------------------------------------------
remove the lower triangular submatrices from the factor matrix
and insert into the submatrix object. note: front row and column
ids must be changed to their local values. if the matrix is on
the diagonal, i.e., L(J,J), its row and column indices must be
mapped to local indices.
----------------------------------------------------------------
*/
for ( Jsub = 0 ; Jsub < nfrontSub ; Jsub++ ) {
J = frontSubIds[Jsub] ;
FrontMtx_lowerAdjFronts(submtx, Jsub, &size, &list) ;
for ( ii = 0 ; ii < size ; ii++ ) {
Ksub = list[ii] ;
K = frontSubIds[Ksub] ;
if ( 1 == I2Ohash_remove(frontmtx->lowerhash,
K, J, (void *) &mtx) ) {
SubMtx_setIds(mtx, Ksub, Jsub) ;
if ( K == J ) {
SubMtx_columnIndices(mtx, &ncol, &colind) ;
IVgather(ncol, colind, colmap, colind) ;
SubMtx_rowIndices(mtx, &nrow, &rowind) ;
IVgather(nrow, rowind, rowmap, rowind) ;
}
I2Ohash_insert(submtx->lowerhash, Ksub, Jsub, (void *) mtx);
submtx->nentL += mtx->nent ;
}
}
}
}
/*
------------------------
free the working storage
------------------------
*/
IVfree(colmap) ;
if ( FRONTMTX_IS_NONSYMMETRIC(frontmtx) ) {
IVfree(rowmap) ;
}
return(1) ; }
/*--------------------------------------------------------------------*/
int
main ( int argc, char *argv[] )
/*
-------------------------------------------------------
read in an ETree object and an equivalence map,
expand the ETree object and optionally write to a file.
created -- 98sep05, cca
-------------------------------------------------------
*/
{
char *inEqmapFileName, *inETreeFileName, *outETreeFileName ;
double t1, t2 ;
ETree *etree, *etree2 ;
FILE *msgFile ;
int msglvl, rc ;
IV *eqmapIV ;
if ( argc != 6 ) {
fprintf(stdout,
"\n\n usage : %s msglvl msgFile inETreeFile inEqmapFile outETreeFile"
"\n msglvl -- message level"
"\n msgFile -- message file"
"\n inETreeFile -- input file, must be *.etreef or *.etreeb"
"\n inEqmapFile -- input file, must be *.ivf or *.ivb"
"\n outETreeFile -- output file, must be *.etreef or *.etreeb"
"\n", argv[0]) ;
return(0) ;
}
msglvl = atoi(argv[1]) ;
if ( strcmp(argv[2], "stdout") == 0 ) {
msgFile = stdout ;
} else if ( (msgFile = fopen(argv[2], "a")) == NULL ) {
fprintf(stderr, "\n fatal error in %s"
"\n unable to open file %s\n",
argv[0], argv[2]) ;
return(-1) ;
}
inETreeFileName = argv[3] ;
inEqmapFileName = argv[4] ;
outETreeFileName = argv[5] ;
fprintf(msgFile,
"\n %s "
"\n msglvl -- %d"
"\n msgFile -- %s"
"\n inETreeFile -- %s"
"\n inEqmapFile -- %s"
"\n outETreeFile -- %s"
"\n",
argv[0], msglvl, argv[2],
inETreeFileName, inEqmapFileName, outETreeFileName) ;
fflush(msgFile) ;
/*
------------------------
read in the ETree object
------------------------
*/
if ( strcmp(inETreeFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
etree = ETree_new() ;
MARKTIME(t1) ;
rc = ETree_readFromFile(etree, inETreeFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in etree from file %s",
t2 - t1, inETreeFileName) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from ETree_readFromFile(%p,%s)",
rc, etree, inETreeFileName) ;
exit(-1) ;
}
fprintf(msgFile, "\n\n after reading ETree object from file %s",
inETreeFileName) ;
if ( msglvl > 2 ) {
ETree_writeForHumanEye(etree, msgFile) ;
} else {
ETree_writeStats(etree, msgFile) ;
}
fflush(msgFile) ;
/*
-------------------------------------
read in the equivalence map IV object
-------------------------------------
*/
if ( strcmp(inEqmapFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
eqmapIV = IV_new() ;
MARKTIME(t1) ;
rc = IV_readFromFile(eqmapIV, inEqmapFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in eqmapIV from file %s",
t2 - t1, inEqmapFileName) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from IV_readFromFile(%p,%s)",
rc, eqmapIV, inEqmapFileName) ;
exit(-1) ;
}
fprintf(msgFile, "\n\n after reading IV object from file %s",
inEqmapFileName) ;
if ( msglvl > 2 ) {
IV_writeForHumanEye(eqmapIV, msgFile) ;
} else {
IV_writeStats(eqmapIV, msgFile) ;
}
fflush(msgFile) ;
/*
-----------------------
expand the ETree object
-----------------------
*/
etree2 = ETree_expand(etree, eqmapIV) ;
fprintf(msgFile, "\n\n after expanding the ETree object") ;
if ( msglvl > 2 ) {
ETree_writeForHumanEye(etree2, msgFile) ;
} else {
ETree_writeStats(etree2, msgFile) ;
}
fflush(msgFile) ;
/*
--------------------------
write out the ETree object
--------------------------
*/
if ( strcmp(outETreeFileName, "none") != 0 ) {
MARKTIME(t1) ;
rc = ETree_writeToFile(etree2, outETreeFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : write etree to file %s",
t2 - t1, outETreeFileName) ;
}
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from ETree_writeToFile(%p,%s)",
rc, etree2, outETreeFileName) ;
}
/*
---------------------
free the ETree object
---------------------
*/
ETree_free(etree) ;
IV_free(eqmapIV) ;
ETree_free(etree2) ;
fprintf(msgFile, "\n") ;
fclose(msgFile) ;
return(1) ; }
/*
-------------------------------------------------
expand an ETree object by splitting a large front
into a chain of smaller fronts.
created -- 96jun27, cca
-------------------------------------------------
*/
ETree *
ETree_splitFronts (
ETree *etree,
int vwghts[],
int maxfrontsize,
int seed
) {
ETree *etree2 ;
int count, front, ii, I, Inew, J, Jnew, nbnd, newsize, nint, nfront,
nfront2, nsplit, nvtx, prev, size, sizeJ, v, vwght ;
int *bndwghts, *fch, *head, *indices, *link, *newbndwghts, *newmap,
*newnodwghts, *newpar, *nodwghts, *roots, *sib, *vtxToFront ;
Tree *tree ;
/*
---------------
check the input
---------------
*/
if ( etree == NULL
|| (nfront = etree->nfront) <= 0
|| (nvtx = etree->nvtx) <= 0
|| maxfrontsize <= 0 ) {
fprintf(stderr, "\n fatal error in ETree_splitFronts(%p,%p,%d,%d)"
"\n bad input\n", etree, vwghts, maxfrontsize, seed) ;
spoolesFatal();
}
tree = etree->tree ;
fch = tree->fch ;
sib = tree->sib ;
nodwghts = IV_entries(etree->nodwghtsIV) ;
bndwghts = IV_entries(etree->bndwghtsIV) ;
vtxToFront = IV_entries(etree->vtxToFrontIV) ;
/*
--------------------------
set up the working storage
--------------------------
*/
newpar = IVinit(nvtx, -1) ;
roots = IVinit(nfront, -1) ;
newmap = IVinit(nvtx, -1) ;
newnodwghts = IVinit(nvtx, -1) ;
newbndwghts = IVinit(nvtx, -1) ;
head = IVinit(nfront, -1) ;
link = IVinit(nvtx, -1) ;
indices = IVinit(nvtx, -1) ;
for ( v = 0 ; v < nvtx ; v++ ) {
front = vtxToFront[v] ;
link[v] = head[front] ;
head[front] = v ;
}
/*
------------------------------------------------
execute a post-order traversal of the front tree
------------------------------------------------
*/
nfront2 = 0 ;
for ( J = Tree_postOTfirst(tree) ;
J != -1 ;
J = Tree_postOTnext(tree, J) ) {
sizeJ = 0 ;
for ( v = head[J], count = 0 ; v != -1 ; v = link[v] ) {
indices[count++] = v ;
vwght = (vwghts != NULL) ? vwghts[v] : 1 ;
sizeJ += vwght ;
}
if ( sizeJ != nodwghts[J] ) {
fprintf(stderr, "\n fatal error in ETree_splitFronts(%p,%p,%d,%d)"
"\n J = %d, sizeJ = %d, nodwght = %d\n",
etree, vwghts, maxfrontsize, seed, J, sizeJ, nodwghts[J]) ;
spoolesFatal();
}
#if MYDEBUG > 0
fprintf(stdout, "\n\n checking out front %d, size %d", J, sizeJ) ;
#endif
if ( sizeJ <= maxfrontsize || fch[J] == -1 ) {
/*
-------------------------------------------
this front is small enough (or is a domain)
-------------------------------------------
*/
Jnew = nfront2++ ;
for ( ii = 0 ; ii < count ; ii++ ) {
v = indices[ii] ;
newmap[v] = Jnew ;
#if MYDEBUG > 1
fprintf(stdout, "\n mapping vertex %d into new front %d",
v, Jnew) ;
#endif
}
for ( I = fch[J] ; I != -1 ; I = sib[I] ) {
Inew = roots[I] ;
newpar[Inew] = Jnew ;
}
newnodwghts[Jnew] = nodwghts[J] ;
newbndwghts[Jnew] = bndwghts[J] ;
roots[J] = Jnew ;
#if MYDEBUG > 0
fprintf(stdout, "\n front is small enough, Jnew = %d", Jnew) ;
#endif
} else {
/*
------------------------------------------
this front is too large, split into pieces
whose size differs by one vertex
------------------------------------------
*/
nsplit = (sizeJ + maxfrontsize - 1)/maxfrontsize ;
newsize = sizeJ / nsplit ;
if ( sizeJ % nsplit != 0 ) {
newsize++ ;
}
#if MYDEBUG > 0
fprintf(stdout,
"\n front is too large, %d target fronts, target size = %d",
nsplit, newsize) ;
#endif
prev = -1 ;
nint = nodwghts[J] ;
nbnd = nint + bndwghts[J] ;
if ( seed > 0 ) {
IVshuffle(count, indices, seed) ;
}
ii = 0 ;
while ( ii < count ) {
Jnew = nfront2++ ;
size = 0 ;
while ( ii < count ) {
v = indices[ii] ;
vwght = (vwghts != NULL) ? vwghts[v] : 1 ;
#if MYDEBUG > 0
fprintf(stdout,
"\n ii = %d, v = %d, vwght = %d, size = %d",
ii, v, vwght, size) ;
#endif
/*
-----------------------------------------------
97aug28, cca
bug fix. front is created even if it is too big
-----------------------------------------------
*/
if ( newsize >= size + vwght || size == 0 ) {
newmap[v] = Jnew ;
size += vwght ;
#if MYDEBUG > 0
fprintf(stdout,
"\n mapping vertex %d into new front %d, size = %d",
v, Jnew, size) ;
#endif
ii++ ;
} else {
break ;
}
}
if ( prev == -1 ) {
for ( I = fch[J] ; I != -1 ; I = sib[I] ) {
Inew = roots[I] ;
newpar[Inew] = Jnew ;
}
} else {
newpar[prev] = Jnew ;
}
prev = Jnew ;
newnodwghts[Jnew] = size ;
nbnd = nbnd - size ;
newbndwghts[Jnew] = nbnd ;
#if MYDEBUG > 0
fprintf(stdout, "\n new front %d, size %d, bnd %d",
Jnew, newnodwghts[Jnew], newbndwghts[Jnew]) ;
#endif
}
roots[J] = Jnew ;
}
}
/*
---------------------------
create the new ETree object
---------------------------
*/
etree2 = ETree_new() ;
ETree_init1(etree2, nfront2, nvtx) ;
IVcopy(nfront2, etree2->tree->par, newpar) ;
Tree_setFchSibRoot(etree2->tree) ;
IVcopy(nvtx, IV_entries(etree2->vtxToFrontIV), newmap) ;
IVcopy(nfront2, IV_entries(etree2->nodwghtsIV), newnodwghts) ;
IVcopy(nfront2, IV_entries(etree2->bndwghtsIV), newbndwghts) ;
/*
------------------------
free the working storage
------------------------
*/
IVfree(newpar) ;
IVfree(roots) ;
IVfree(newmap) ;
IVfree(newnodwghts) ;
IVfree(newbndwghts) ;
IVfree(head) ;
IVfree(link) ;
IVfree(indices) ;
return(etree2) ; }
/*--------------------------------------------------------------------*/
int
main ( int argc, char *argv[] )
/*
-----------------------------------------------------
test the factor method for a grid matrix
(0) read in matrix from source file
(1) conver data matrix to InpMtx object if necessary
(2) create Graph and ETree object if necessary
(3) read in/create an ETree object
(4) create a solution matrix object
(5) multiply the solution with the matrix
to get a right hand side matrix object
(6) factor the matrix
(7) solve the system
created -- 98dec30, jwu
-----------------------------------------------------
*/
{
char etreeFileName[80], mtxFileName[80], *cpt, rhsFileName[80],
srcFileName[80], ctemp[81], msgFileName[80], slnFileName[80] ;
Chv *chv, *rootchv ;
ChvManager *chvmanager ;
DenseMtx *mtxB, *mtxQ, *mtxX, *mtxZ ;
double one[2] = { 1.0, 0.0 } ;
FrontMtx *frontmtx ;
InpMtx *mtxA ;
SubMtxManager *mtxmanager ;
double cputotal, droptol, conv_tol, factorops ;
double cpus[9] ;
Drand drand ;
double nops, tau, t1, t2 ;
ETree *frontETree ;
Graph *graph ;
FILE *msgFile, *inFile ;
int error, loc, msglvl, neqns, nzf, iformat,
pivotingflag, rc, seed, sparsityflag, symmetryflag,
method[METHODS], type, nrhs, etreeflag ;
int stats[6] ;
int nnzA, Ik, itermax, zversion, iterout ;
IV *newToOldIV, *oldToNewIV ;
IVL *symbfacIVL ;
int i, j, k, m, n, imethod, maxdomainsize, maxzeros, maxsize;
int nouter,ninner ;
if ( argc != 2 ) {
fprintf(stdout,
"\n\n usage : %s inFile"
"\n inFile -- input filename"
"\n", argv[0]) ;
return(-1) ;
}
/* read input file */
inFile = fopen(argv[1], "r");
if (inFile == (FILE *)NULL) {
fprintf(stderr, "\n fatal error in %s: unable to open file %s\n",
argv[0], argv[1]) ;
return(-1) ;
}
for (i=0; i<METHODS; i++) method[i]=-1;
imethod=0;
k=0;
while (1) {
fgets(ctemp, 80, inFile);
if (ctemp[0] != '*') {
/*printf("l=%2d:%s\n", strlen(ctemp),ctemp);*/
if (strlen(ctemp)==80) {
fprintf(stderr, "\n fatal error in %s: input line contains more than "
"80 characters.\n",argv[0]);
exit(-1);
}
if (k==0) {
sscanf(ctemp, "%d", &iformat);
if (iformat < 0 || iformat > 2) {
fprintf(stderr, "\n fatal error in %s: "
"invalid source matrix format\n",argv[0]) ;
return(-1) ;
}
}
else if (k==1)
sscanf(ctemp, "%s", srcFileName);
else if (k==2)
sscanf(ctemp, "%s", mtxFileName);
else if (k==3) {
sscanf(ctemp, "%d", &etreeflag);
if (etreeflag < 0 || etreeflag > 4) {
fprintf(stderr, "\n fatal error in %s: "
"invalid etree file status\n",argv[0]) ;
return(-1) ;
}
}
else if (k==4)
sscanf(ctemp, "%s", etreeFileName);
else if (k==5)
sscanf(ctemp, "%s", rhsFileName);
else if (k==6)
sscanf(ctemp, "%s", slnFileName);
else if (k==7){
sscanf(ctemp, "%s", msgFileName);
if ( strcmp(msgFileName, "stdout") == 0 ) {
msgFile = stdout ;
}
else if ( (msgFile = fopen(msgFileName, "a")) == NULL ) {
fprintf(stderr, "\n fatal error in %s"
"\n unable to open file %s\n", argv[0], ctemp) ;
return(-1) ;
}
}
else if (k==8)
sscanf(ctemp, "%d %d %d %d %d %d",
&msglvl, &seed, &nrhs, &Ik, &itermax, &iterout);
else if (k==9)
sscanf(ctemp, "%d %d %d", &symmetryflag, &sparsityflag, &pivotingflag);
else if (k==10)
sscanf(ctemp, "%lf %lf %lf", &tau, &droptol, &conv_tol);
else if (k==11) {
/*
for (j=0; j<strlen(ctemp); j++) {
printf("j=%2d:%s",j,ctemp+j);
if (ctemp[j] == ' ' && ctemp[j+1] != ' ') {
sscanf(ctemp+j, "%d", method+imethod);
printf("method[%d]=%d\n",imethod,method[imethod]);
if (method[imethod] < 0) break;
imethod++;
}
}
*/
imethod = sscanf(ctemp,"%d %d %d %d %d %d %d %d %d %d",
method, method+1, method+2, method+3, method+4,
method+5, method+6, method+7, method+8, method+9);
/*printf("imethod=%d\n",imethod);*/
for (j=0; j<imethod; j++) {
/*printf("method[%d]=%d\n",j,method[j]);*/
if (method[j]<0) {
imethod=j;
break;
}
}
if (imethod == 0) {
fprintf(msgFile,"No method assigned in input file\n");
return(-1);
}
}
k++;
}
if (k==12) break;
}
fclose(inFile);
/* reset nrhs to 1 */
if (nrhs > 1) {
fprintf(msgFile,"*** Multiple right-hand-side vectors is not allowed yet.\n");
fprintf(msgFile,"*** nrhs is reset to 1.\n");
nrhs =1;
}
fprintf(msgFile,
"\n %s "
"\n srcFileName -- %s"
"\n mtxFileName -- %s"
"\n etreeFileName -- %s"
"\n rhsFileName -- %s"
"\n msglvl -- %d"
"\n seed -- %d"
"\n symmetryflag -- %d"
"\n sparsityflag -- %d"
"\n pivotingflag -- %d"
"\n tau -- %e"
"\n droptol -- %e"
"\n conv_tol -- %e"
"\n method -- ",
argv[0], srcFileName, mtxFileName, etreeFileName, rhsFileName,
msglvl, seed, symmetryflag, sparsityflag, pivotingflag,
tau, droptol, conv_tol) ;
for (k=0; k<imethod; k++)
fprintf(msgFile, "%d ", method[k]);
fprintf(msgFile, "\n ", method[k]);
fflush(msgFile) ;
/*
--------------------------------------
initialize the random number generator
--------------------------------------
*/
Drand_setDefaultFields(&drand) ;
Drand_init(&drand) ;
Drand_setSeed(&drand, seed) ;
/*Drand_setUniform(&drand, 0.0, 1.0) ;*/
Drand_setNormal(&drand, 0.0, 1.0) ;
/*
----------------------------------------------
read in or convert source to the InpMtx object
----------------------------------------------
*/
rc = 1;
if ( strcmp(srcFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(-1) ;
}
mtxA = InpMtx_new() ;
MARKTIME(t1) ;
if (iformat == 0) { /* InpMtx source format */
rc = InpMtx_readFromFile(mtxA, srcFileName) ;
strcpy(mtxFileName, srcFileName);
if ( rc != 1 )
fprintf(msgFile, "\n return value %d from InpMtx_readFromFile(%p,%s)",
rc, mtxA, srcFileName) ;
}
else if (iformat == 1) { /* HBF source format */
rc = InpMtx_readFromHBfile(mtxA, srcFileName) ;
if ( rc != 1 )
fprintf(msgFile, "\n return value %d from InpMtx_readFromHBfile(%p,%s)",
rc, mtxA, srcFileName) ;
}
else { /* AIJ2 source format */
rc = InpMtx_readFromAIJ2file(mtxA, srcFileName) ;
if ( rc != 1 )
fprintf(msgFile, "\n return value %d from InpMtx_readFromAIJ2file(%p,%s)",
rc, mtxA, srcFileName) ;
}
MARKTIME(t2) ;
if (iformat>0 && strcmp(mtxFileName, "none") != 0 ) {
rc = InpMtx_writeToFile(mtxA, mtxFileName) ;
if ( rc != 1 )
fprintf(msgFile, "\n return value %d from InpMtx_writeToFile(%p,%s)",
rc, mtxA, mtxFileName) ;
}
fprintf(msgFile, "\n CPU %8.3f : read in (+ convert to) mtxA from file %s",
t2 - t1, mtxFileName) ;
if (rc != 1) {
goto end_read;
}
type = mtxA->inputMode ;
neqns = 1 + IVmax(mtxA->nent, InpMtx_ivec1(mtxA), &loc) ;
if ( INPMTX_IS_BY_ROWS(mtxA) ) {
fprintf(msgFile, "\n matrix coordinate type is rows") ;
} else if ( INPMTX_IS_BY_COLUMNS(mtxA) ) {
fprintf(msgFile, "\n matrix coordinate type is columns") ;
} else if ( INPMTX_IS_BY_CHEVRONS(mtxA) ) {
fprintf(msgFile, "\n matrix coordinate type is chevrons") ;
} else {
fprintf(msgFile, "\n\n, error, bad coordinate type") ;
rc=-1;
goto end_read;
}
if ( INPMTX_IS_RAW_DATA(mtxA) ) {
fprintf(msgFile, "\n matrix storage mode is raw data\n") ;
} else if ( INPMTX_IS_SORTED(mtxA) ) {
fprintf(msgFile, "\n matrix storage mode is sorted\n") ;
} else if ( INPMTX_IS_BY_VECTORS(mtxA) ) {
fprintf(msgFile, "\n matrix storage mode is by vectors\n") ;
} else {
fprintf(msgFile, "\n\n, error, bad storage mode") ;
rc=-1;
goto end_read;
}
if ( msglvl > 1 ) {
fprintf(msgFile, "\n\n after reading InpMtx object from file %s",
mtxFileName) ;
if ( msglvl == 2 ) {
InpMtx_writeStats(mtxA, msgFile) ;
} else {
InpMtx_writeForHumanEye(mtxA, msgFile) ;
}
fflush(msgFile) ;
}
/*
Get the nonzeros in matrix A and print it
*/
nnzA = InpMtx_nent( mtxA );
fprintf(msgFile, "\n\n Input matrix size %d NNZ %d",
neqns, nnzA) ;
/*
--------------------------------------------------------
generate the linear system
1. generate solution matrix and fill with random numbers
2. generate rhs matrix and fill with zeros
3. compute matrix-matrix multiply
--------------------------------------------------------
*/
MARKTIME(t1) ;
mtxX = DenseMtx_new() ;
DenseMtx_init(mtxX, type, 0, -1, neqns, nrhs, 1, neqns) ;
mtxB = DenseMtx_new() ;
if (strcmp(rhsFileName, "none")) {
rc = DenseMtx_readFromFile(mtxB, rhsFileName) ;
if ( rc != 1 )
fprintf(msgFile, "\n return value %d from DenseMtx_readFromFile(%p,%s)",
rc, mtxB, rhsFileName) ;
DenseMtx_zero(mtxX) ;
}
else {
DenseMtx_init(mtxB, type, 1, -1, neqns, nrhs, 1, neqns) ;
DenseMtx_fillRandomEntries(mtxX, &drand) ;
DenseMtx_zero(mtxB) ;
switch ( symmetryflag ) {
case SPOOLES_SYMMETRIC :
InpMtx_sym_mmm(mtxA, mtxB, one, mtxX) ;
break ;
case SPOOLES_HERMITIAN :
InpMtx_herm_mmm(mtxA, mtxB, one, mtxX) ;
break ;
case SPOOLES_NONSYMMETRIC :
InpMtx_nonsym_mmm(mtxA, mtxB, one, mtxX) ;
break ;
default :
break ;
}
}
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : set up the solution and rhs ",
t2 - t1) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n original mtxX") ;
DenseMtx_writeForHumanEye(mtxX, msgFile) ;
fprintf(msgFile, "\n\n original mtxB") ;
DenseMtx_writeForHumanEye(mtxB, msgFile) ;
fflush(msgFile) ;
}
if (rc != 1) {
InpMtx_free(mtxA);
DenseMtx_free(mtxX);
DenseMtx_free(mtxB);
goto end_init;
}
/*
------------------------
read in/create the ETree object
------------------------
*/
MARKTIME(t1) ;
if (etreeflag == 0) { /* read in ETree from file */
if ( strcmp(etreeFileName, "none") == 0 )
fprintf(msgFile, "\n no file to read from") ;
frontETree = ETree_new() ;
rc = ETree_readFromFile(frontETree, etreeFileName) ;
if (rc!=1)
fprintf(msgFile, "\n return value %d from ETree_readFromFile(%p,%s)",
rc, frontETree, etreeFileName) ;
}
else {
graph = Graph_new() ;
rc = InpMtx_createGraph(mtxA, graph);
if (rc!=1) {
fprintf(msgFile, "\n return value %d from InpMtx_createGraph(%p,%p)",
rc, mtxA, graph) ;
Graph_free(graph);
goto end_tree;
}
if (etreeflag == 1) { /* Via BestOfNDandMS */
maxdomainsize = 500; maxzeros = 1000; maxsize = 64 ;
frontETree = orderViaBestOfNDandMS(graph, maxdomainsize, maxzeros,
maxsize, seed, msglvl, msgFile) ;
}
else if (etreeflag == 2) { /* Via MMD */
frontETree = orderViaMMD(graph, seed, msglvl, msgFile) ;
}
else if (etreeflag == 3) { /* Via MS */
maxdomainsize = 500;
frontETree = orderViaMS(graph, maxdomainsize, seed, msglvl, msgFile) ;
}
else if (etreeflag == 4) { /* Via ND */
maxdomainsize = 500;
frontETree = orderViaND(graph, maxdomainsize, seed, msglvl, msgFile) ;
}
Graph_free(graph);
/* optionally write out the ETree object */
if ( strcmp(etreeFileName, "none") != 0 ) {
fprintf(msgFile, "\n\n writing out ETree to file %s",
etreeFileName) ;
ETree_writeToFile(frontETree, etreeFileName) ;
}
}
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : read in/create frontETree from file %s",
t2 - t1, etreeFileName) ;
if ( rc != 1 ) {
ETree_free(frontETree);
goto end_tree;
}
ETree_leftJustify(frontETree) ;
if ( msglvl > 1 ) {
fprintf(msgFile, "\n\n after reading ETree object from file %s",
etreeFileName) ;
if ( msglvl == 2 ) {
ETree_writeStats(frontETree, msgFile) ;
} else {
ETree_writeForHumanEye(frontETree, msgFile) ;
}
}
fflush(msgFile) ;
/*
--------------------------------------------------
get the permutations, permute the matrix and the
front tree, and compute the symbolic factorization
--------------------------------------------------
*/
MARKTIME(t1) ;
oldToNewIV = ETree_oldToNewVtxPerm(frontETree) ;
newToOldIV = ETree_newToOldVtxPerm(frontETree) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : get permutations", t2 - t1) ;
MARKTIME(t1) ;
ETree_permuteVertices(frontETree, oldToNewIV) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : permute front tree", t2 - t1) ;
MARKTIME(t1) ;
InpMtx_permute(mtxA, IV_entries(oldToNewIV), IV_entries(oldToNewIV)) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : permute mtxA", t2 - t1) ;
if ( symmetryflag == SPOOLES_SYMMETRIC
|| symmetryflag == SPOOLES_HERMITIAN ) {
MARKTIME(t1) ;
InpMtx_mapToUpperTriangle(mtxA) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : map to upper triangle", t2 - t1) ;
}
if ( ! INPMTX_IS_BY_CHEVRONS(mtxA) ) {
MARKTIME(t1) ;
InpMtx_changeCoordType(mtxA, INPMTX_BY_CHEVRONS) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : change coordinate type", t2 - t1) ;
}
if ( INPMTX_IS_RAW_DATA(mtxA) ) {
MARKTIME(t1) ;
InpMtx_changeStorageMode(mtxA, INPMTX_SORTED) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : sort entries ", t2 - t1) ;
}
if ( INPMTX_IS_SORTED(mtxA) ) {
MARKTIME(t1) ;
InpMtx_changeStorageMode(mtxA, INPMTX_BY_VECTORS) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : convert to vectors ", t2 - t1) ;
}
MARKTIME(t1) ;
symbfacIVL = SymbFac_initFromInpMtx(frontETree, mtxA) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : symbolic factorization", t2 - t1) ;
MARKTIME(t1) ;
DenseMtx_permuteRows(mtxB, oldToNewIV) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : permute rhs", t2 - t1) ;
/*
------------------------------
initialize the FrontMtx object
------------------------------
*/
MARKTIME(t1) ;
frontmtx = FrontMtx_new() ;
mtxmanager = SubMtxManager_new() ;
SubMtxManager_init(mtxmanager, NO_LOCK, 0) ;
FrontMtx_init(frontmtx, frontETree, symbfacIVL,
type, symmetryflag, sparsityflag, pivotingflag,
NO_LOCK, 0, NULL, mtxmanager, msglvl, msgFile) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n\n CPU %8.3f : initialize the front matrix",
t2 - t1) ;
if ( msglvl > 1 ) {
fprintf(msgFile,
"\n nendD = %d, nentL = %d, nentU = %d",
frontmtx->nentD, frontmtx->nentL, frontmtx->nentU) ;
SubMtxManager_writeForHumanEye(mtxmanager, msgFile) ;
}
if ( msglvl > 2 ) {
fprintf(msgFile, "\n front matrix initialized") ;
FrontMtx_writeForHumanEye(frontmtx, msgFile) ;
fflush(msgFile) ;
}
/*
-----------------
factor the matrix
-----------------
*/
nzf = ETree_nFactorEntries(frontETree, symmetryflag) ;
factorops = ETree_nFactorOps(frontETree, type, symmetryflag) ;
fprintf(msgFile,
"\n %d factor entries, %.0f factor ops, %8.3f ratio",
nzf, factorops, factorops/nzf) ;
IVzero(6, stats) ;
DVzero(9, cpus) ;
chvmanager = ChvManager_new() ;
ChvManager_init(chvmanager, NO_LOCK, 1) ;
MARKTIME(t1) ;
rootchv = FrontMtx_factorInpMtx(frontmtx, mtxA, tau, droptol,
chvmanager, &error, cpus,
stats, msglvl, msgFile) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n\n CPU %8.3f : factor matrix, %8.3f mflops",
t2 - t1, 1.e-6*factorops/(t2-t1)) ;
if ( rootchv != NULL ) {
fprintf(msgFile, "\n\n factorization did not complete") ;
for ( chv = rootchv ; chv != NULL ; chv = chv->next ) {
fprintf(stdout, "\n chv %d, nD = %d, nL = %d, nU = %d",
chv->id, chv->nD, chv->nL, chv->nU) ;
}
}
if ( error >= 0 ) {
fprintf(msgFile, "\n\n error encountered at front %d\n", error) ;
rc=error ;
goto end_front;
}
fprintf(msgFile,
"\n %8d pivots, %8d pivot tests, %8d delayed rows and columns",
stats[0], stats[1], stats[2]) ;
if ( frontmtx->rowadjIVL != NULL ) {
fprintf(msgFile,
"\n %d entries in rowadjIVL", frontmtx->rowadjIVL->tsize) ;
}
if ( frontmtx->coladjIVL != NULL ) {
fprintf(msgFile,
", %d entries in coladjIVL", frontmtx->coladjIVL->tsize) ;
}
if ( frontmtx->upperblockIVL != NULL ) {
fprintf(msgFile,
"\n %d fronts, %d entries in upperblockIVL",
frontmtx->nfront, frontmtx->upperblockIVL->tsize) ;
}
if ( frontmtx->lowerblockIVL != NULL ) {
fprintf(msgFile,
", %d entries in lowerblockIVL",
frontmtx->lowerblockIVL->tsize) ;
}
fprintf(msgFile,
"\n %d entries in D, %d entries in L, %d entries in U",
stats[3], stats[4], stats[5]) ;
fprintf(msgFile, "\n %d locks", frontmtx->nlocks) ;
if ( FRONTMTX_IS_SYMMETRIC(frontmtx)
|| FRONTMTX_IS_HERMITIAN(frontmtx) ) {
int nneg, npos, nzero ;
FrontMtx_inertia(frontmtx, &nneg, &nzero, &npos) ;
fprintf(msgFile,
"\n %d negative, %d zero and %d positive eigenvalues",
nneg, nzero, npos) ;
fflush(msgFile) ;
}
cputotal = cpus[8] ;
if ( cputotal > 0.0 ) {
fprintf(msgFile,
"\n initialize fronts %8.3f %6.2f"
"\n load original entries %8.3f %6.2f"
"\n update fronts %8.3f %6.2f"
"\n assemble postponed data %8.3f %6.2f"
"\n factor fronts %8.3f %6.2f"
"\n extract postponed data %8.3f %6.2f"
"\n store factor entries %8.3f %6.2f"
"\n miscellaneous %8.3f %6.2f"
"\n total time %8.3f",
cpus[0], 100.*cpus[0]/cputotal,
cpus[1], 100.*cpus[1]/cputotal,
cpus[2], 100.*cpus[2]/cputotal,
cpus[3], 100.*cpus[3]/cputotal,
cpus[4], 100.*cpus[4]/cputotal,
cpus[5], 100.*cpus[5]/cputotal,
cpus[6], 100.*cpus[6]/cputotal,
cpus[7], 100.*cpus[7]/cputotal, cputotal) ;
}
if ( msglvl > 1 ) {
SubMtxManager_writeForHumanEye(mtxmanager, msgFile) ;
ChvManager_writeForHumanEye(chvmanager, msgFile) ;
}
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n front factor matrix") ;
FrontMtx_writeForHumanEye(frontmtx, msgFile) ;
}
/*
------------------------------
post-process the factor matrix
------------------------------
*/
MARKTIME(t1) ;
FrontMtx_postProcess(frontmtx, msglvl, msgFile) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n\n CPU %8.3f : post-process the matrix", t2 - t1) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n front factor matrix after post-processing") ;
FrontMtx_writeForHumanEye(frontmtx, msgFile) ;
}
fprintf(msgFile, "\n\n after post-processing") ;
if ( msglvl > 1 ) SubMtxManager_writeForHumanEye(frontmtx->manager, msgFile) ;
/*
----------------
solve the system
----------------
*/
neqns = mtxB->nrow ;
mtxZ = DenseMtx_new() ;
DenseMtx_init(mtxZ, type, 0, 0, neqns, nrhs, 1, neqns) ;
zversion=INPMTX_IS_COMPLEX_ENTRIES(mtxA);
for (k=0; k<imethod; k++) {
DenseMtx_zero(mtxZ) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n rhs") ;
DenseMtx_writeForHumanEye(mtxB, msgFile) ;
fflush(stdout) ;
}
fprintf(msgFile, "\n\n itemax %d", itermax) ;
DVzero(6, cpus) ;
MARKTIME(t1) ;
switch ( method[k] ) {
case BiCGStabR :
if (zversion)
rc=zbicgstabr(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
else
rc=bicgstabr(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
break;
case BiCGStabL :
if (zversion)
rc=zbicgstabl(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
else
rc=bicgstabl(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
break;
case TFQMRR :
if (zversion)
rc=ztfqmrr(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
else
rc=tfqmrr(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
break;
case TFQMRL :
if (zversion)
rc=ztfqmrl(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
else
rc=tfqmrl(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
break;
case PCGR :
if (zversion)
rc=zpcgr(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
else
rc=pcgr(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
break;
case PCGL :
if (zversion)
rc=zpcgl(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
else
rc=pcgl(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ, mtxB,
itermax, conv_tol, msglvl, msgFile);
break;
case MLBiCGStabR :
mtxQ = DenseMtx_new() ;
DenseMtx_init(mtxQ, type, 0, -1, neqns, Ik, 1, neqns) ;
Drand_setUniform(&drand, 0.0, 1.0) ;
DenseMtx_fillRandomEntries(mtxQ, &drand) ;
if (zversion)
rc=zmlbicgstabr(neqns, type, symmetryflag, mtxA, frontmtx, mtxQ, mtxZ,
mtxB, itermax, conv_tol, msglvl, msgFile);
else
rc=mlbicgstabr(neqns, type, symmetryflag, mtxA, frontmtx, mtxQ, mtxZ,
mtxB, itermax, conv_tol, msglvl, msgFile);
DenseMtx_free(mtxQ) ;
break;
case MLBiCGStabL :
mtxQ = DenseMtx_new() ;
DenseMtx_init(mtxQ, type, 0, -1, neqns, Ik, 1, neqns) ;
Drand_setUniform(&drand, 0.0, 1.0) ;
DenseMtx_fillRandomEntries(mtxQ, &drand) ;
if (zversion)
rc=zmlbicgstabl(neqns, type, symmetryflag, mtxA, frontmtx, mtxQ, mtxZ,
mtxB, itermax, conv_tol, msglvl, msgFile);
else
rc=mlbicgstabl(neqns, type, symmetryflag, mtxA, frontmtx, mtxQ, mtxZ,
mtxB, itermax, conv_tol, msglvl, msgFile);
DenseMtx_free(mtxQ) ;
break;
case BGMRESR:
if (zversion)
fprintf(msgFile, "\n\n *** BGMRESR complex version is not available "
"at this moment. ") ;
else
rc=bgmresr(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ,
mtxB, iterout, itermax, &nouter, &ninner, conv_tol,
msglvl, msgFile);
break;
case BGMRESL:
if (zversion)
fprintf(msgFile, "\n\n *** BGMRESR complex version is not available "
"at this moment. ") ;
else
rc=bgmresl(neqns, type, symmetryflag, mtxA, frontmtx, mtxZ,
mtxB, iterout, itermax, &nouter, &ninner, conv_tol,
msglvl, msgFile);
break;
default:
fprintf(msgFile, "\n\n *** Invalid method number ") ;
}
MARKTIME(t2) ;
fprintf(msgFile, "\n\n CPU %8.3f : solve the system", t2 - t1) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n computed solution") ;
DenseMtx_writeForHumanEye(mtxZ, msgFile) ;
fflush(stdout) ;
}
/*
-------------------------------------------------------------
permute the computed solution back into the original ordering
-------------------------------------------------------------
*/
MARKTIME(t1) ;
DenseMtx_permuteRows(mtxZ, newToOldIV) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %8.3f : permute solution", t2 - t1) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n permuted solution") ;
DenseMtx_writeForHumanEye(mtxZ, msgFile) ;
fflush(stdout) ;
}
/*
-------------
save solution
-------------
*/
if ( strcmp(slnFileName, "none") != 0 ) {
DenseMtx_writeToFile(mtxZ, slnFileName) ;
}
/*
-----------------
compute the error
-----------------
*/
if (!strcmp(rhsFileName, "none")) {
DenseMtx_sub(mtxZ, mtxX) ;
if (method[k] <8) {
mtxQ = DenseMtx_new() ;
DenseMtx_init(mtxQ, type, 0, -1, neqns, 1, 1, neqns) ;
rc=DenseMtx_initAsSubmatrix (mtxQ, mtxZ, 0, neqns-1, 0, 0);
fprintf(msgFile, "\n\n maxabs error = %12.4e", DenseMtx_maxabs(mtxQ)) ;
DenseMtx_free(mtxQ) ;
}
else
fprintf(msgFile, "\n\n maxabs error = %12.4e", DenseMtx_maxabs(mtxZ)) ;
if ( msglvl > 1 ) {
fprintf(msgFile, "\n\n error") ;
DenseMtx_writeForHumanEye(mtxZ, msgFile) ;
fflush(stdout) ;
}
if ( msglvl > 1 )
SubMtxManager_writeForHumanEye(frontmtx->manager, msgFile) ;
}
fprintf(msgFile, "\n--------- End of Method %d -------\n",method[k]) ;
}
/*
------------------------
free the working storage
------------------------
*/
DenseMtx_free(mtxZ) ;
end_front:
ChvManager_free(chvmanager) ;
SubMtxManager_free(mtxmanager) ;
FrontMtx_free(frontmtx) ;
IVL_free(symbfacIVL) ;
IV_free(oldToNewIV) ;
IV_free(newToOldIV) ;
end_tree:
ETree_free(frontETree) ;
end_init:
DenseMtx_free(mtxB) ;
DenseMtx_free(mtxX) ;
end_read:
InpMtx_free(mtxA) ;
fprintf(msgFile, "\n") ;
fclose(msgFile) ;
return(rc) ; }
/*--------------------------------------------------------------------*/
int
main ( int argc, char *argv[] )
/*
----------------------------------------
get statistics for a semi-implicit solve
created -- 97dec11, cca
----------------------------------------
*/
{
char *inGraphFileName, *inETreeFileName, *inMapFileName ;
double nA21, nL, nL11, nL22, nPhi, nV, t1, t2 ;
ETree *etree ;
int ii, inside, J, K, msglvl, nfront, nJ,
nvtx, rc, sizeJ, v, vsize, w ;
int *adjJ, *frontmap, *map, *nodwghts,
*vadj, *vtxToFront, *vwghts ;
IV *mapIV ;
IVL *symbfacIVL ;
Graph *graph ;
FILE *msgFile ;
Tree *tree ;
if ( argc != 6 ) {
fprintf(stdout,
"\n\n usage : %s msglvl msgFile GraphFile ETreeFile mapFile "
"\n msglvl -- message level"
"\n msgFile -- message file"
"\n GraphFile -- input graph file, must be *.graphf or *.graphb"
"\n ETreeFile -- input ETree file, must be *.etreef or *.etreeb"
"\n mapFile -- input map IV file, must be *.ivf or *.ivb"
"\n",
argv[0]) ;
return(0) ;
}
msglvl = atoi(argv[1]) ;
if ( strcmp(argv[2], "stdout") == 0 ) {
msgFile = stdout ;
} else if ( (msgFile = fopen(argv[2], "a")) == NULL ) {
fprintf(stderr, "\n fatal error in %s"
"\n unable to open file %s\n",
argv[0], argv[2]) ;
return(-1) ;
}
inGraphFileName = argv[3] ;
inETreeFileName = argv[4] ;
inMapFileName = argv[5] ;
fprintf(msgFile,
"\n %s "
"\n msglvl -- %d"
"\n msgFile -- %s"
"\n GraphFile -- %s"
"\n ETreeFile -- %s"
"\n mapFile -- %s"
"\n",
argv[0], msglvl, argv[2],
inGraphFileName, inETreeFileName, inMapFileName) ;
fflush(msgFile) ;
/*
------------------------
read in the Graph object
------------------------
*/
graph = Graph_new() ;
if ( strcmp(inGraphFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
MARKTIME(t1) ;
rc = Graph_readFromFile(graph, inGraphFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in graph from file %s",
t2 - t1, inGraphFileName) ;
nvtx = graph->nvtx ;
vwghts = graph->vwghts ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from Graph_readFromFile(%p,%s)",
rc, graph, inGraphFileName) ;
exit(-1) ;
}
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n after reading Graph object from file %s",
inGraphFileName) ;
Graph_writeForHumanEye(graph, msgFile) ;
fflush(msgFile) ;
}
/*
------------------------
read in the ETree object
------------------------
*/
etree = ETree_new() ;
if ( strcmp(inETreeFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
MARKTIME(t1) ;
rc = ETree_readFromFile(etree, inETreeFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in etree from file %s",
t2 - t1, inETreeFileName) ;
nfront = ETree_nfront(etree) ;
tree = ETree_tree(etree) ;
vtxToFront = ETree_vtxToFront(etree) ;
nodwghts = ETree_nodwghts(etree) ;
nL = ETree_nFactorEntries(etree, 2) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from ETree_readFromFile(%p,%s)",
rc, etree, inETreeFileName) ;
exit(-1) ;
}
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n after reading ETree object from file %s",
inETreeFileName) ;
ETree_writeForHumanEye(etree, msgFile) ;
fflush(msgFile) ;
}
/*
-------------------------
read in the map IV object
-------------------------
*/
mapIV = IV_new() ;
if ( strcmp(inMapFileName, "none") == 0 ) {
fprintf(msgFile, "\n no file to read from") ;
exit(0) ;
}
MARKTIME(t1) ;
rc = IV_readFromFile(mapIV, inMapFileName) ;
MARKTIME(t2) ;
fprintf(msgFile, "\n CPU %9.5f : read in mapIV from file %s",
t2 - t1, inMapFileName) ;
map = IV_entries(mapIV) ;
if ( rc != 1 ) {
fprintf(msgFile, "\n return value %d from IV_readFromFile(%p,%s)",
rc, mapIV, inMapFileName) ;
exit(-1) ;
}
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n after reading IV object from file %s",
inMapFileName) ;
IV_writeForHumanEye(mapIV, msgFile) ;
fflush(msgFile) ;
}
nV = nPhi = 0 ;
if ( vwghts == NULL ) {
for ( v = 0 ; v < nvtx ; v++ ) {
nV++ ;
if ( map[v] == 0 ) {
nPhi++ ;
}
}
} else {
for ( v = 0 ; v < nvtx ; v++ ) {
nV += vwghts[v] ;
if ( map[v] == 0 ) {
nPhi += vwghts[v] ;
}
}
}
fprintf(msgFile, "\n nPhi = %.0f, nV = %.0f", nPhi, nV) ;
/*
-------------------------
get the frontmap[] vector
-------------------------
*/
frontmap = IVinit(nfront, -1) ;
for ( v = 0 ; v < nvtx ; v++ ) {
J = vtxToFront[v] ;
if ( frontmap[J] == -1 ) {
frontmap[J] = map[v] ;
} else if ( frontmap[J] != map[v] ) {
fprintf(msgFile, "\n\n error, frontmap[%d] = %d, map[%d] = %d",
J, frontmap[J], v, map[v]) ;
}
}
/*
----------------------------------
compute the symbolic factorization
----------------------------------
*/
symbfacIVL = SymbFac_initFromGraph(etree, graph) ;
if ( msglvl > 2 ) {
fprintf(msgFile, "\n\n symbolic factorization") ;
IVL_writeForHumanEye(symbfacIVL, msgFile) ;
fflush(msgFile) ;
}
/*
--------------------------------------------
compute the number of entries in L11 and L22
--------------------------------------------
*/
nL11 = nL22 = 0 ;
for ( J = Tree_postOTfirst(tree) ;
J != -1 ;
J = Tree_postOTnext(tree, J) ) {
nJ = nodwghts[J] ;
if ( msglvl > 3 ) {
fprintf(msgFile, "\n\n front %d, nJ = %d", J, nJ) ;
}
IVL_listAndSize(symbfacIVL, J, &sizeJ, &adjJ) ;
for ( ii = 0, inside = 0 ; ii < sizeJ ; ii++ ) {
w = adjJ[ii] ;
K = vtxToFront[w] ;
if ( msglvl > 3 ) {
fprintf(msgFile, "\n w = %d, K = %d", w, K) ;
}
if ( K > J && frontmap[K] == frontmap[J] ) {
inside += (vwghts == NULL) ? 1 : vwghts[w] ;
if ( msglvl > 3 ) {
fprintf(msgFile, ", inside") ;
}
}
}
if ( frontmap[J] != 0 ) {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n inside = %d, adding %d to L11",
inside, nJ*nJ + 2*nJ*inside) ;
}
nL11 += nJ*nJ + 2*nJ*inside ;
} else {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n inside = %d, adding %d to L22",
inside, nJ*nJ + 2*nJ*inside) ;
}
nL22 += nJ*nJ + 2*nJ*inside ;
}
}
if ( msglvl > 0 ) {
fprintf(msgFile, "\n |L| = %.0f, |L11| = %.0f, |L22| = %.0f",
nL, nL11, nL22) ;
}
/*
------------------------------------
compute the number of entries in A21
------------------------------------
*/
nA21 = 0 ;
if ( vwghts != NULL ) {
for ( v = 0 ; v < nvtx ; v++ ) {
if ( map[v] == 0 ) {
Graph_adjAndSize(graph, v, &vsize, &vadj) ;
for ( ii = 0 ; ii < vsize ; ii++ ) {
w = vadj[ii] ;
if ( map[v] != map[w] ) {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n A21 : v = %d, w = %d", v, w) ;
}
nA21 += vwghts[v] * vwghts[w] ;
}
}
}
}
} else {
for ( v = 0 ; v < nvtx ; v++ ) {
if ( map[v] == 0 ) {
Graph_adjAndSize(graph, v, &vsize, &vadj) ;
for ( ii = 0 ; ii < vsize ; ii++ ) {
w = vadj[ii] ;
if ( map[v] != map[w] ) {
if ( msglvl > 3 ) {
fprintf(msgFile, "\n A21 : v = %d, w = %d", v, w) ;
}
nA21++ ;
}
}
}
}
}
if ( msglvl > 0 ) {
fprintf(msgFile,
"\n |L| = %.0f, |L11| = %.0f, |L22| = %.0f, |A21| = %.0f",
nL, nL11, nL22, nA21) ;
fprintf(msgFile,
"\n storage: explicit = %.0f, semi-implicit = %.0f, ratio = %.3f"
"\n opcount: explicit = %.0f, semi-implicit = %.0f, ratio = %.3f",
nL, nL11 + nA21 + nL22,
nL/(nL11 + nA21 + nL22),
2*nL, 4*nL11 + 2*nA21 + 2*nL22,
2*nL/(4*nL11 + 2*nA21 + 2*nL22)) ;
fprintf(msgFile, "\n ratios %8.3f %8.3f %8.3f",
nPhi/nV,
nL/(nL11 + nA21 + nL22),
2*nL/(4*nL11 + 2*nA21 + 2*nL22)) ;
}
/*
------------------------
free the working storage
------------------------
*/
Graph_free(graph) ;
ETree_free(etree) ;
IV_free(mapIV) ;
IVL_free(symbfacIVL) ;
IVfree(frontmap) ;
fprintf(msgFile, "\n") ;
fclose(msgFile) ;
return(1) ; }
