Example #1
0
/****if* H5Of/h5olink_c
 * NAME
 *  h5olink_c
 * PURPOSE
 *  Calls H5Olink
 * INPUTS
 *      object_id        - Object to be linked.
 *      new_loc_id       - File or group identifier specifying location at which object is to be linked.
 *      name             - Name of link to be created, relative to new_loc_id.
 *      namelen          - Length of buffer for link to be created.
 *      lcpl_id          - Link creation property list identifier.
 *      lapl_id          - Link access property list identifier.
 * RETURNS
 *  0 on success, -1 on failure
 * AUTHOR
 *  M. Scot Breitenfeld
 *  April 21, 2008
 * SOURCE
*/
int_f
nh5olink_c (hid_t_f *object_id, hid_t_f *new_loc_id, _fcd name, size_t_f *namelen,
            hid_t_f *lcpl_id, hid_t_f *lapl_id)
/******/
{
  char *c_name = NULL;          /* Buffer to hold C string */
  int_f ret_value = 0;          /* Return value */

  /*
   * Convert FORTRAN name to C name
   */
  if( (c_name = HD5f2cstring(name, (size_t)*namelen)) == NULL)
    HGOTO_DONE(FAIL);

  /*
   * Call H5Olink function.
   */
  if((hid_t_f)H5Olink((hid_t)*object_id, (hid_t)*new_loc_id, c_name,
		       (hid_t)*lcpl_id, (hid_t)*lapl_id) < 0)
    HGOTO_DONE(FAIL);

 done:
  if(c_name)
    HDfree(c_name);
  return ret_value;
}
Example #2
0
/*
 * Class:     hdf_hdf5lib_H5
 * Method:    H5Olink
 * Signature: (JJLjava/lang/String;JJ)V
 */
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Olink
    (JNIEnv *env, jclass clss, jlong cur_loc_id, jlong dst_loc_id,
        jstring dst_name, jlong create_id, jlong access_id)
{
    herr_t      status = -1;
    const char *lDstName;

    PIN_JAVA_STRING(dst_name, lDstName);
    if (lDstName != NULL) {
        status = H5Olink((hid_t)cur_loc_id, (hid_t)dst_loc_id, lDstName, (hid_t)create_id, (hid_t)access_id);

        UNPIN_JAVA_STRING(dst_name, lDstName);

        if (status < 0)
            h5libraryError(env);
    }
} /* end Java_hdf_hdf5lib_H5_H5Olink */
Example #3
0
/*
 * Class:     hdf_hdf5lib_H5
 * Method:    H5Olink
 * Signature: (JJLjava/lang/String;JJ)V
 */
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Olink
    (JNIEnv *env, jclass clss, jlong cur_loc_id, jlong dst_loc_id,
        jstring dst_name, jlong create_id, jlong access_id)
{
    const char *linkDstName = NULL;
    herr_t      status = FAIL;

    UNUSED(clss);

    if (NULL == dst_name)
        H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Olink: link destination name is NULL");

    PIN_JAVA_STRING(ENVONLY, dst_name, linkDstName, NULL, "H5Olink: link destination name not pinned");

    if ((status = H5Olink((hid_t)cur_loc_id, (hid_t)dst_loc_id, linkDstName, (hid_t)create_id, (hid_t)access_id)) < 0)
        H5_LIBRARY_ERROR(ENVONLY);

done:
    if (linkDstName)
        UNPIN_JAVA_STRING(ENVONLY, dst_name, linkDstName);
} /* end Java_hdf_hdf5lib_H5_H5Olink */
Example #4
0
int
main()
{
   printf("\n*** Checking HDF5 group functions.\n");
   printf("*** Checking out root group...");
   {
      hid_t fileid, grpid, access_plistid;

      /* Open the root group of a new file. */
      if ((access_plistid = H5Pcreate(H5P_FILE_ACCESS)) < 0) ERR;
      if (H5Pset_fclose_degree(access_plistid, H5F_CLOSE_SEMI)) ERR;
      if ((fileid = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT,
			      access_plistid)) < 0) ERR;
      if ((grpid = H5Gopen(fileid, "/")) < 0) ERR;
      if (H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;

      /* Reopen file and root group. */
      if ((fileid = H5Fopen(FILE_NAME, H5F_ACC_RDWR,
			    access_plistid)) < 0) ERR;
      if ((grpid = H5Gopen(fileid, "/")) < 0) ERR;
      if (H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0)
	 ERR;
   }

   SUMMARIZE_ERR;
   printf("*** Checking out H5Gmove...");
   {

      hid_t fileid, grpid;
      hid_t datasetid, spaceid;

      /* Create file with one dataset. */
      if ((fileid = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT,
			      H5P_DEFAULT)) < 0) ERR;
      if ((grpid = H5Gopen(fileid, "/")) < 0) ERR;
      if ((spaceid = H5Screate(H5S_SCALAR)) < 0) ERR;
      if ((datasetid = H5Dcreate(grpid, DATASET_NAME, H5T_NATIVE_INT,
				 spaceid, H5P_DEFAULT)) < 0) ERR;
      if (H5Dclose(datasetid) < 0 ||
	  H5Sclose(spaceid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;

      /* Reopen file and check, then rename dataset. */
      if ((fileid = H5Fopen(FILE_NAME, H5F_ACC_RDWR,
			    H5P_DEFAULT)) < 0) ERR;
      if ((grpid = H5Gopen(fileid, "/")) < 0) ERR;
      if ((datasetid = H5Dopen1(grpid, DATASET_NAME)) < 0) ERR;
      if (H5Dclose(datasetid) < 0) ERR;
      if (H5Gmove(grpid, DATASET_NAME, NEW_NAME) < 0) ERR;
      if ((datasetid = H5Dopen1(grpid, NEW_NAME)) < 0) ERR;
      if (H5Dclose(datasetid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0)
	 ERR;
   }

   SUMMARIZE_ERR;
   printf("*** Checking out sub-groups...");

   {
      hid_t fileid, grpid, subgrpid;

      /* Create file with some nested groups. */
      if ((fileid = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT,
			      H5P_DEFAULT)) < 0) ERR;
      if ((grpid = H5Gcreate(fileid, GRP_NAME, 0)) < 0) ERR;
      if ((subgrpid = H5Gcreate(grpid, SUB_GRP_NAME, 0)) < 0) ERR;
      if (H5Gclose(subgrpid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;

      /* Reopen file and discover groups. */
      if ((fileid = H5Fopen(FILE_NAME, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) ERR;
      if ((grpid = H5Gopen(fileid, GRP_NAME)) < 0) ERR;
      if ((subgrpid = H5Gopen(grpid, SUB_GRP_NAME)) < 0) ERR;
      if (H5Gclose(subgrpid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;
   }

   SUMMARIZE_ERR;
   printf("*** Checking out UTF8 named sub-group...");

   {
      hid_t fileid, grpid, subgrpid;

      /* Create file with nested group. */
      if ((fileid = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT,
			      H5P_DEFAULT)) < 0) ERR;
      if ((grpid = H5Gcreate(fileid, (char *)norm_utf8, 0)) < 0) ERR;
      if ((subgrpid = H5Gcreate(grpid, SUB_GRP_NAME, 0)) < 0) ERR;
      if (H5Gclose(subgrpid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;

      /* Reopen file and discover groups. */
      if ((fileid = H5Fopen(FILE_NAME, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) ERR;
      if ((grpid = H5Gopen(fileid, (char *)norm_utf8)) < 0) ERR;
      if ((subgrpid = H5Gopen(grpid, SUB_GRP_NAME)) < 0) ERR;
      if (H5Gclose(subgrpid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;
   }

   SUMMARIZE_ERR;
   printf("*** Checking out UTF8 named sub-group with group creation ordering...");

   {
      hid_t fileid, grpid, subgrpid;
      hid_t fapl_id, fcpl_id, gcpl_id;

      /* Create file with nested group. */
      if ((fapl_id = H5Pcreate(H5P_FILE_ACCESS)) < 0) ERR;
      if (H5Pset_libver_bounds(fapl_id, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) ERR;
      if ((fcpl_id = H5Pcreate(H5P_FILE_CREATE)) < 0) ERR;
      if (H5Pset_link_creation_order(fcpl_id, H5P_CRT_ORDER_TRACKED|H5P_CRT_ORDER_INDEXED) < 0) ERR;
      if ((fileid = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, fcpl_id, fapl_id)) < 0) ERR;

      if ((gcpl_id = H5Pcreate(H5P_GROUP_CREATE)) < 0) ERR;
      if (H5Pset_link_creation_order(gcpl_id, H5P_CRT_ORDER_TRACKED|H5P_CRT_ORDER_INDEXED) < 0) ERR;
      if ((grpid = H5Gcreate_anon(fileid, gcpl_id, H5P_DEFAULT)) < 0) ERR;
      if ((H5Olink(grpid, fileid, (char *)norm_utf8, H5P_DEFAULT, H5P_DEFAULT)) < 0) ERR;

      if ((subgrpid = H5Gcreate(grpid, SUB_GRP_NAME, 0)) < 0) ERR;
      if (H5Gclose(subgrpid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;

      /* Reopen file and discover groups. */
      if ((fileid = H5Fopen(FILE_NAME, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) ERR;
      if ((grpid = H5Gopen(fileid, (char *)norm_utf8)) < 0) ERR;
      if ((subgrpid = H5Gopen(grpid, SUB_GRP_NAME)) < 0) ERR;
      if (H5Gclose(subgrpid) < 0 ||
	  H5Gclose(grpid) < 0 ||
	  H5Fclose(fileid) < 0) ERR;
   }

   SUMMARIZE_ERR;

   FINAL_RESULTS;
}