double calculate(area_des ad, int fd, char **par, double *result)
{
CELL *buf;
CELL corrCell;
CELL precCell;
int i, j;
int mask_fd = -1, *mask_buf;
int ris = 0;
int masked = FALSE;
int a = 0; /* a=0 if all cells are null */
long m = 0;
long tot = 0;
long zero = 0;
long totCorr = 0;
double indice = 0;
double somma = 0;
double p = 0;
double area = 0;
double t;
avl_tree albero = NULL;
AVL_table *array;
generic_cell uc;
uc.t = CELL_TYPE;
/* open mask if needed */
if (ad->mask == 1) {
if ((mask_fd = open(ad->mask_name, O_RDONLY, 0755)) < 0)
return RLI_ERRORE;
mask_buf = G_malloc(ad->cl * sizeof(int));
if (mask_buf == NULL) {
G_fatal_error("malloc mask_buf failed");
return RLI_ERRORE;
}
masked = TRUE;
}
Rast_set_c_null_value(&precCell, 1);
for (j = 0; j < ad->rl; j++) { /* for each row */
if (masked) {
if (read(mask_fd, mask_buf, (ad->cl * sizeof(int))) < 0) {
G_fatal_error("mask read failed");
return RLI_ERRORE;
}
}
buf = RLI_get_cell_raster_row(fd, j + ad->y, ad);
for (i = 0; i < ad->cl; i++) { /* for each cell in the row */
area++;
corrCell = buf[i + ad->x];
if ((masked) && (mask_buf[i + ad->x] == 0)) {
Rast_set_c_null_value(&corrCell, 1);
area--;
}
if (!(Rast_is_null_value(&corrCell, uc.t))) {
a = 1;
if (Rast_is_null_value(&precCell, uc.t)) {
precCell = corrCell;
}
if (corrCell != precCell) {
if (albero == NULL) {
uc.val.c = precCell;
albero = avl_make(uc, totCorr);
if (albero == NULL) {
G_fatal_error("avl_make error");
return RLI_ERRORE;
}
else
m++;
}
else {
uc.val.c = precCell;
ris = avl_add(&albero, uc, totCorr);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avl_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
m++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avl_make unknown error");
return RLI_ERRORE;
}
}
}
totCorr = 1;
} /* endif not equal cells */
else { /*equal cells */
totCorr++;
}
precCell = corrCell;
}
}
}
/*last closing */
if (a != 0) {
if (albero == NULL) {
uc.val.c = precCell;
albero = avl_make(uc, totCorr);
if (albero == NULL) {
G_fatal_error("avl_make error");
return RLI_ERRORE;
}
m++;
}
else {
uc.val.c = precCell;
ris = avl_add(&albero, uc, totCorr);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avl_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
m++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avl_add unknown error");
return RLI_ERRORE;
}
}
}
}
array = G_malloc(m * sizeof(AVL_tableRow));
if (array == NULL) {
G_fatal_error("malloc array failed");
return RLI_ERRORE;
}
tot = avl_to_array(albero, zero, array);
if (tot != m) {
G_warning("avl_to_array unaspected value. the result could be wrong");
return RLI_ERRORE;
}
char *sval;
sval = par[0];
double alpha_double;
alpha_double = (double)atof(sval);
/* claculate index summary */
for (i = 0; i < m; i++) {
t = (double)(array[i]->tot);
p = t / area;
G_debug(1, "Valore p: %g, valore pow: %g", p, pow(p, alpha_double));
somma = somma + pow(p, alpha_double);
}
indice = (1 / (1 - alpha_double)) * log(somma);
if (isnan(indice) || isinf(indice)) {
indice = -1;
}
G_debug(1, "Valore somma: %g Valore indice: %g", somma, indice);
*result = indice;
G_free(array);
if (masked)
G_free(mask_buf);
return RLI_OK;
}
int calculate(int fd, struct area_entry *ad, double *result)
{
CELL *buf, *buf_sup, *buf_null;
CELL corrCell, precCell, supCell;
long npatch, area;
long pid, old_pid, new_pid, *pid_corr, *pid_sup, *ltmp;
struct pst *pst;
long nalloc, incr;
int i, j, k;
int connected;
int mask_fd, *mask_buf, *mask_sup, *mask_tmp, masked;
struct Cell_head hd;
Rast_get_window(&hd);
buf_null = Rast_allocate_c_buf();
Rast_set_c_null_value(buf_null, Rast_window_cols());
buf_sup = buf_null;
/* initialize patch ids */
pid_corr = G_malloc(Rast_window_cols() * sizeof(long));
pid_sup = G_malloc(Rast_window_cols() * sizeof(long));
for (j = 0; j < Rast_window_cols(); j++) {
pid_corr[j] = 0;
pid_sup[j] = 0;
}
/* open mask if needed */
mask_fd = -1;
mask_buf = mask_sup = NULL;
masked = FALSE;
if (ad->mask == 1) {
if ((mask_fd = open(ad->mask_name, O_RDONLY, 0755)) < 0)
return RLI_ERRORE;
mask_buf = G_malloc(ad->cl * sizeof(int));
if (mask_buf == NULL) {
G_fatal_error("malloc mask_buf failed");
return RLI_ERRORE;
}
mask_sup = G_malloc(ad->cl * sizeof(int));
if (mask_sup == NULL) {
G_fatal_error("malloc mask_buf failed");
return RLI_ERRORE;
}
for (j = 0; j < ad->cl; j++)
mask_buf[j] = 0;
masked = TRUE;
}
/* calculate number of patches */
npatch = 0;
area = 0;
pid = 0;
/* patch size and type */
incr = 1024;
if (incr > ad->rl)
incr = ad->rl;
if (incr > ad->cl)
incr = ad->cl;
if (incr < 2)
incr = 2;
nalloc = incr;
pst = G_malloc(nalloc * sizeof(struct pst));
for (k = 0; k < nalloc; k++) {
pst[k].count = 0;
}
for (i = 0; i < ad->rl; i++) {
buf = RLI_get_cell_raster_row(fd, i + ad->y, ad);
if (i > 0) {
buf_sup = RLI_get_cell_raster_row(fd, i - 1 + ad->y, ad);
}
if (masked) {
mask_tmp = mask_sup;
mask_sup = mask_buf;
mask_buf = mask_tmp;
if (read(mask_fd, mask_buf, (ad->cl * sizeof(int))) < 0)
return 0;
}
ltmp = pid_sup;
pid_sup = pid_corr;
pid_corr = ltmp;
Rast_set_c_null_value(&precCell, 1);
connected = 0;
for (j = 0; j < ad->cl; j++) {
pid_corr[j + ad->x] = 0;
corrCell = buf[j + ad->x];
if (masked && (mask_buf[j] == 0)) {
Rast_set_c_null_value(&corrCell, 1);
}
if (Rast_is_c_null_value(&corrCell)) {
connected = 0;
precCell = corrCell;
continue;
}
area++;
supCell = buf_sup[j + ad->x];
if (masked && (mask_sup[j] == 0)) {
Rast_set_c_null_value(&supCell, 1);
}
if (!Rast_is_c_null_value(&precCell) && corrCell == precCell) {
pid_corr[j + ad->x] = pid_corr[j - 1 + ad->x];
connected = 1;
pst[pid_corr[j + ad->x]].count++;
}
else {
connected = 0;
}
if (!Rast_is_c_null_value(&supCell) && corrCell == supCell) {
if (pid_corr[j + ad->x] != pid_sup[j + ad->x]) {
/* connect or merge */
/* after r.clump */
if (connected) {
npatch--;
if (npatch == 0) {
G_fatal_error("npatch == 0 at row %d, col %d", i, j);
}
}
old_pid = pid_corr[j + ad->x];
new_pid = pid_sup[j + ad->x];
pid_corr[j + ad->x] = new_pid;
if (old_pid > 0) {
/* merge */
/* update left side of the current row */
for (k = 0; k < j; k++) {
if (pid_corr[k + ad->x] == old_pid)
pid_corr[k + ad->x] = new_pid;
}
/* update right side of the previous row */
for (k = j + 1; k < ad->cl; k++) {
if (pid_sup[k + ad->x] == old_pid)
pid_sup[k + ad->x] = new_pid;
}
pst[new_pid].count += pst[old_pid].count;
pst[old_pid].count = 0;
if (old_pid == pid)
pid--;
}
else {
pst[new_pid].count++;
}
}
connected = 1;
}
if (!connected) {
/* start new patch */
npatch++;
pid++;
pid_corr[j + ad->x] = pid;
if (pid >= nalloc) {
pst = (struct pst *)G_realloc(pst, (pid + incr) * sizeof(struct pst));
for (k = nalloc; k < pid + incr; k++)
pst[k].count = 0;
nalloc = pid + incr;
}
pst[pid].count = 1;
pst[pid].type.t = CELL_TYPE;
pst[pid].type.val.c = corrCell;
}
precCell = corrCell;
}
}
if (npatch > 0) {
double EW_DIST1, EW_DIST2, NS_DIST1, NS_DIST2;
double area_p;
double cell_size_m;
double min, max;
/* calculate distance */
G_begin_distance_calculations();
/* EW Dist at North edge */
EW_DIST1 = G_distance(hd.east, hd.north, hd.west, hd.north);
/* EW Dist at South Edge */
EW_DIST2 = G_distance(hd.east, hd.south, hd.west, hd.south);
/* NS Dist at East edge */
NS_DIST1 = G_distance(hd.east, hd.north, hd.east, hd.south);
/* NS Dist at West edge */
NS_DIST2 = G_distance(hd.west, hd.north, hd.west, hd.south);
cell_size_m = (((EW_DIST1 + EW_DIST2) / 2) / hd.cols) *
(((NS_DIST1 + NS_DIST2) / 2) / hd.rows);
/* get min and max patch size */
min = 1.0 / 0.0; /* inf */
max = -1.0 / 0.0; /* -inf */
for (old_pid = 1; old_pid <= pid; old_pid++) {
if (pst[old_pid].count > 0) {
area_p = cell_size_m * pst[old_pid].count / 10000;
if (min > area_p)
min = area_p;
if (max < area_p)
max = area_p;
}
}
*result = max - min;
}
else
Rast_set_d_null_value(result, 1);
if (masked) {
close(mask_fd);
G_free(mask_buf);
G_free(mask_sup);
}
G_free(buf_null);
G_free(pid_corr);
G_free(pid_sup);
G_free(pst);
return RLI_OK;
}
int calculate(int fd, area_des ad, double *result)
{
CELL *buf;
CELL *buf_sup;
CELL corrCell;
CELL precCell;
CELL supCell;
int i, j;
int mask_fd = -1, *mask_buf;
int ris = 0;
int masked = FALSE;
int areaPatch = 0; /*if all cells are null areaPatch=0 */
long npatch = 0;
long tot = 0;
long zero = 0;
long totCorr = 0;
long idCorr = 0;
long lastId = 0;
long doppi = 0;
long np = 0;
long *mask_patch_sup;
long *mask_patch_corr;
double indice = 0;
double somma = 0;
double area = 0;
double mn = 0;
double sd = 0;
double cv = 0;
avlID_tree albero = NULL;
avlID_table *array = NULL;
generic_cell gc;
gc.t = CELL_TYPE;
/* open mask if needed */
if (ad->mask == 1) {
if ((mask_fd = open(ad->mask_name, O_RDONLY, 0755)) < 0)
return RLI_ERRORE;
mask_buf = G_malloc(ad->cl * sizeof(int));
if (mask_buf == NULL) {
G_fatal_error("malloc mask_buf failed");
return RLI_ERRORE;
}
masked = TRUE;
}
mask_patch_sup = G_malloc(ad->cl * sizeof(long));
if (mask_patch_sup == NULL) {
G_fatal_error("malloc mask_patch_sup failed");
return RLI_ERRORE;
}
mask_patch_corr = G_malloc(ad->cl * sizeof(long));
if (mask_patch_corr == NULL) {
G_fatal_error("malloc mask_patch_corr failed");
return RLI_ERRORE;
}
buf_sup = G_allocate_cell_buf();
if (buf_sup == NULL) {
G_fatal_error("malloc buf_sup failed");
return RLI_ERRORE;
}
buf = G_allocate_cell_buf();
if (buf == NULL) {
G_fatal_error("malloc buf failed");
return RLI_ERRORE;
}
G_set_c_null_value(buf_sup + ad->x, ad->cl); /*the first time buf_sup is all null */
for (i = 0; i < ad->cl; i++) {
mask_patch_sup[i] = 0;
mask_patch_corr[i] = 0;
}
for (j = 0; j < ad->rl; j++)
/*for each raster row */
{
if (j > 0) {
buf_sup = RLI_get_cell_raster_row(fd, j - 1 + ad->y, ad);
}
buf = RLI_get_cell_raster_row(fd, j + ad->y, ad);
if (masked) {
if (read(mask_fd, mask_buf, (ad->cl * sizeof(int))) < 0) {
G_fatal_error("mask read failed");
return RLI_ERRORE;
}
}
G_set_c_null_value(&precCell, 1);
for (i = 0; i < ad->cl; i++)
/* for each cell in the row */
{
area++;
corrCell = buf[i + ad->x];
if (masked && mask_buf[i + ad->x] == 0) {
G_set_c_null_value(&corrCell, 1);
area--;
}
if (!(G_is_null_value(&corrCell, gc.t))) {
areaPatch++;
if (i > 0)
precCell = buf[i - 1 + ad->x];
if (j == 0)
G_set_c_null_value(&supCell, 1);
else
supCell = buf_sup[i + ad->x];
if (corrCell != precCell)
/* ?
* 1 2
* */
{
if (corrCell != supCell) {
/* 3
* 1 2
* */
/*new patch */
if (idCorr == 0) { /*first found patch */
lastId = 1;
idCorr = 1;
totCorr = 1;
mask_patch_corr[i] = idCorr;
}
else
/*not first patch */
/* put in the tree the previous value */
{
if (albero == NULL) {
albero = avlID_make(idCorr, totCorr);
if (albero == NULL) {
G_fatal_error("avlID_make error");
return RLI_ERRORE;
}
npatch++;
}
else
/*tree not empty */
{
ris = avlID_add(&albero, idCorr, totCorr);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error
("avlID_add unknown error");
return RLI_ERRORE;
}
}
}
totCorr = 1;
lastId++;
idCorr = lastId;
mask_patch_corr[i] = idCorr;
}
}
else
/* current cell and upper cell are equal */
/* 2
* 1 2
* */
{
if (albero == NULL) {
albero = avlID_make(idCorr, totCorr);
if (albero == NULL) {
G_fatal_error("avlID_make error");
return RLI_ERRORE;
}
npatch++;
}
else { /*tree not null */
ris = avlID_add(&albero, idCorr, totCorr);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avlID_add unknown error");
return RLI_ERRORE;
}
}
}
idCorr = mask_patch_sup[i];
mask_patch_corr[i] = idCorr;
totCorr = 1;
}
}
else { /*current cell and previuos cell are equal */
/* ?
* 1 1
*/
if (corrCell == supCell) { /*current cell and upper cell are equal */
/* 1
* 1 1
*/
if (mask_patch_sup[i] != mask_patch_corr[i - 1]) {
long r = 0;
long del = mask_patch_sup[i];
r = avlID_sub(&albero, del); /*r=number of cell of patch removed */
if (r == 0) {
G_fatal_error("avlID_sub error");
return RLI_ERRORE;
}
/*Remove one patch because it makes part of a patch already found */
ris = avlID_add(&albero, idCorr, r);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avlID_add unknown error");
return RLI_ERRORE;
}
}
r = i;
while (r < ad->cl) {
if (mask_patch_sup[r] == del) {
mask_patch_sup[r] = idCorr;
}
r++;
}
mask_patch_corr[i] = idCorr;
}
else {
mask_patch_corr[i] = idCorr;
}
}
else { /*current cell and upper cell are not equal */
/* 2
* 1 1
*/
mask_patch_corr[i] = idCorr;
}
totCorr++;
}
}
else { /*cell is null or is not to consider */
mask_patch_corr[i] = 0;
}
}
{
int ii;
long c;
for (ii = 0; ii < ad->cl; ii++) {
c = mask_patch_corr[ii];
mask_patch_sup[ii] = c;
mask_patch_corr[ii] = 0;
}
}
}
if (areaPatch != 0) {
if (albero == NULL) {
albero = avlID_make(idCorr, totCorr);
if (albero == NULL) {
G_fatal_error("avlID_make error");
return RLI_ERRORE;
}
npatch++;
}
else {
ris = avlID_add(&albero, idCorr, totCorr);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avlID_add unknown error");
return RLI_ERRORE;
}
}
}
array = G_malloc(npatch * sizeof(avlID_tableRow));
if (array == NULL) {
G_fatal_error("malloc array failed");
return RLI_ERRORE;
}
tot = avlID_to_array(albero, zero, array);
if (tot != npatch) {
G_warning
("avlID_to_array unaspected value. the result could be wrong");
return RLI_ERRORE;
}
for (i = 0; i < npatch; i++) {
if (array[i]->tot == 0) {
doppi++;
}
}
np = npatch;
npatch = npatch - doppi;
mn = areaPatch / npatch;
/* calculate summary */
for (i = 0; i < np; i++) {
long areaPi = 0;
double diff;
if (array[i]->tot != 0) {
ris = ris + array[i]->tot;
areaPi = (double)array[i]->tot;
diff = areaPi - mn;
somma = somma + (diff * diff);
}
}
sd = sqrt(somma / npatch);
cv = sd * 100 / mn;
indice = cv;
G_free(array);
}
else
indice = (double)(-1);
if (masked)
G_free(mask_buf);
G_free(mask_patch_sup);
*result = indice;
G_free(buf_sup);
return RLI_OK;
}
int calculate(int fd, area_des ad, struct Cell_head hd, double *result)
{
CELL *buf;
CELL *buf_sup;
CELL corrCell;
CELL precCell;
CELL supCell;
int i, j;
int mask_fd = -1, *mask_buf;
int ris = 0;
int masked = FALSE;
long npatch = 0;
long tot = 0;
long zero = 0;
long uno = 1;
long idCorr = 0;
long lastId = 0;
long doppi = 0;
long *mask_patch_sup;
long *mask_patch_corr;
double indice = 0;
double area = 0; /*if all cells are null area=0 */
double areaCorrect = 0;
double EW_DIST1, EW_DIST2, NS_DIST1, NS_DIST2;
avlID_tree albero = NULL;
avlID_table *array;
/* open mask if needed */
if (ad->mask == 1) {
if ((mask_fd = open(ad->mask_name, O_RDONLY, 0755)) < 0)
return RLI_ERRORE;
mask_buf = G_malloc(ad->cl * sizeof(int));
if (mask_buf == NULL) {
G_fatal_error("malloc mask_buf failed");
return RLI_ERRORE;
}
masked = TRUE;
}
mask_patch_sup = G_malloc(ad->cl * sizeof(long));
if (mask_patch_sup == NULL) {
G_fatal_error("malloc mask_patch_sup failed");
return RLI_ERRORE;
}
mask_patch_corr = G_malloc(ad->cl * sizeof(long));
if (mask_patch_corr == NULL) {
G_fatal_error("malloc mask_patch_corr failed");
return RLI_ERRORE;
}
buf_sup = Rast_allocate_c_buf();
if (buf_sup == NULL) {
G_fatal_error("malloc buf_sup failed");
return RLI_ERRORE;
}
buf = Rast_allocate_c_buf();
if (buf == NULL) {
G_fatal_error("malloc buf failed");
return RLI_ERRORE;
}
Rast_set_c_null_value(buf_sup + ad->x, ad->cl); /*the first time buf_sup is all null */
for (i = 0; i < ad->cl; i++) {
mask_patch_sup[i] = 0;
mask_patch_corr[i] = 0;
}
/*for each raster row */
for (j = 0; j < ad->rl; j++) {
if (j > 0) {
buf_sup = RLI_get_cell_raster_row(fd, j - 1 + ad->y, ad);
}
buf = RLI_get_cell_raster_row(fd, j + ad->y, ad);
if (masked) {
if (read(mask_fd, mask_buf, (ad->cl * sizeof(int))) < 0) {
G_fatal_error("mask read failed");
return RLI_ERRORE;
}
}
Rast_set_c_null_value(&precCell, 1);
for (i = 0; i < ad->cl; i++) { /*for each cell in the row */
corrCell = buf[i + ad->x];
if ((masked) && (mask_buf[i + ad->x] == 0)) {
Rast_set_c_null_value(&corrCell, 1);
}
/*valid cell */
if (!(Rast_is_null_value(&corrCell, CELL_TYPE))) {
area++;
if (i > 0)
precCell = buf[i - 1 + ad->x];
if (j == 0)
Rast_set_c_null_value(&supCell, 1);
else
supCell = buf_sup[i + ad->x];
if (corrCell != precCell) {
if (corrCell != supCell) {
/*new patch */
if (idCorr == 0) { /*first patch */
lastId = 1;
idCorr = 1;
mask_patch_corr[i] = idCorr;
}
else { /*not first patch */
/* put in the tree previous values */
if (albero == NULL) {
albero = avlID_make(idCorr, uno);
if (albero == NULL) {
G_fatal_error("avlID_make error");
return RLI_ERRORE;
}
npatch++;
}
else { /* tree not null */
ris = avlID_add(&albero, idCorr, uno);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error
("avlID_add unknown error");
return RLI_ERRORE;
}
}
}
lastId++;
idCorr = lastId;
mask_patch_corr[i] = idCorr;
}
}
else { /*current cell and upper cell are equal */
if ((corrCell == precCell) &&
(mask_patch_sup[i] != mask_patch_corr[i - 1])) {
long r = 0;
long del = mask_patch_sup[i];
r = avlID_sub(&albero, del);
if (r == 0) {
G_fatal_error("avlID_sub error");
return RLI_ERRORE;
}
/*Remove one patch because it makes part of a patch already found */
ris = avlID_add(&albero, idCorr, uno);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avlID_add unknown error");
return RLI_ERRORE;
}
}
r = i;
while (i < ad->cl) {
if (mask_patch_sup[r] == del) {
mask_patch_sup[r] = idCorr;
}
else {
r = ad->cl + 1;
}
}
}
if (albero == NULL) {
albero = avlID_make(idCorr, uno);
if (albero == NULL) {
G_fatal_error("avlID_make error");
return RLI_ERRORE;
}
npatch++;
}
else { /* tree not null */
ris = avlID_add(&albero, idCorr, uno);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avlID_add unknown error");
return RLI_ERRORE;
}
}
}
idCorr = mask_patch_sup[i];
mask_patch_corr[i] = idCorr;
}
}
else { /*current cell and previous cell are equal */
if ((corrCell == supCell) &&
(mask_patch_sup[i] != mask_patch_corr[i - 1])) {
int l;
mask_patch_corr[i] = mask_patch_sup[i];
l = i - 1;
while (l >= 0) {
if (mask_patch_corr[l] == idCorr) {
mask_patch_corr[l] = mask_patch_sup[i];
l--;
}
else {
l = (-1);
}
}
lastId--;
idCorr = mask_patch_sup[i];
}
else {
mask_patch_corr[i] = idCorr;
}
}
}
else { /*cell not to consider or cell is null */
mask_patch_corr[i] = 0;
}
}
mask_patch_sup = mask_patch_corr;
}
if (area != 0) {
if (albero == NULL) {
albero = avlID_make(idCorr, uno);
if (albero == NULL) {
G_fatal_error("avlID_make error");
return RLI_ERRORE;
}
npatch++;
}
else {
ris = avlID_add(&albero, idCorr, uno);
switch (ris) {
case AVL_ERR:
{
G_fatal_error("avlID_add error");
return RLI_ERRORE;
}
case AVL_ADD:
{
npatch++;
break;
}
case AVL_PRES:
{
break;
}
default:
{
G_fatal_error("avlID_add unknown error");
return RLI_ERRORE;
}
}
}
array = G_malloc(npatch * sizeof(avlID_tableRow));
if (array == NULL) {
G_fatal_error("malloc array failed");
return RLI_ERRORE;
}
tot = avlID_to_array(albero, zero, array);
if (tot != npatch) {
G_warning
("avlID_to_array unaspected value. the result could be wrong");
return RLI_ERRORE;
}
for (i = 0; i < npatch; i++) {
if (array[i]->tot == 0)
doppi++;
}
npatch = npatch - doppi;
/*calculate distance */
G_begin_distance_calculations();
/* EW Dist at North edge */
EW_DIST1 = G_distance(hd.east, hd.north, hd.west, hd.north);
/* EW Dist at South Edge */
EW_DIST2 = G_distance(hd.east, hd.south, hd.west, hd.south);
/* NS Dist at East edge */
NS_DIST1 = G_distance(hd.east, hd.north, hd.east, hd.south);
/* NS Dist at West edge */
NS_DIST2 = G_distance(hd.west, hd.north, hd.west, hd.south);
areaCorrect = (((EW_DIST1 + EW_DIST2) / 2) / hd.cols) *
(((NS_DIST1 + NS_DIST2) / 2) / hd.rows) * (area);
indice = areaCorrect / npatch;
G_free(array);
}
else
indice = (double)(0);
*result = indice;
if (masked)
G_free(mask_buf);
G_free(mask_patch_corr);
G_free(buf_sup);
return RLI_OK;
}
int patch_number(int fd, char **par, area_des ad, double *result)
{
CELL *buf, *sup;
int count = 0, i, j, connected = 0, complete_line = 1, other_above = 0;
struct Cell_head hd;
CELL complete_value;
int mask_fd = -1, *mask_buf, *mask_sup, null_count = 0;
Rast_set_c_null_value(&complete_value, 1);
Rast_get_cellhd(ad->raster, "", &hd);
sup = Rast_allocate_c_buf();
/* open mask if needed */
if (ad->mask == 1) {
if ((mask_fd = open(ad->mask_name, O_RDONLY, 0755)) < 0)
return 0;
mask_buf = malloc(ad->cl * sizeof(int));
mask_sup = malloc(ad->cl * sizeof(int));
}
/*calculate number of patch */
for (i = 0; i < ad->rl; i++) {
buf = RLI_get_cell_raster_row(fd, i + ad->y, ad);
if (i > 0) {
sup = RLI_get_cell_raster_row(fd, i - 1 + ad->y, ad);
}
/* mask values */
if (ad->mask == 1) {
int k;
if (i > 0) {
int *tmp;
tmp = mask_sup;
mask_buf = mask_sup;
}
if (read(mask_fd, mask_buf, (ad->cl * sizeof(int))) < 0)
return 0;
for (k = 0; k < ad->cl; k++) {
if (mask_buf[k] == 0) {
Rast_set_c_null_value(mask_buf + k, 1);
null_count++;
}
}
}
if (complete_line) {
if (!Rast_is_null_value(&(buf[ad->x]), CELL_TYPE) &&
buf[ad->x] != complete_value)
count++;
for (j = 0; j < ad->cl - 1; j++) {
if (buf[j + ad->x] != buf[j + 1 + ad->x]) {
complete_line = 0;
if (!Rast_is_null_value(&(buf[j + 1 + ad->x]), CELL_TYPE)
&& buf[j + 1 + ad->x] != complete_value)
count++;
}
}
if (complete_line) {
complete_value = buf[ad->x];
}
}
else {
complete_line = 1;
connected = 0;
other_above = 0;
for (j = 0; j < ad->cl; j++) {
if (sup[j + ad->x] == buf[j + ad->x]) {
connected = 1;
if (other_above) {
other_above = 0;
count--;
}
}
else {
if (connected &&
!Rast_is_null_value(&(buf[j + ad->x]), CELL_TYPE))
other_above = 1;
}
if (j < ad->cl - 1 && buf[j + ad->x] != buf[j + 1 + ad->x]) {
complete_line = 0;
if (!connected &&
!Rast_is_null_value(&(buf[j + ad->x]), CELL_TYPE)) {
count++;
connected = 0;
other_above = 0;
}
else {
connected = 0;
other_above = 0;
}
}
}
if (!connected &&
sup[ad->cl - 1 + ad->x] != buf[ad->cl - 1 + ad->x]) {
if (!Rast_is_null_value
(&(buf[ad->cl - 1 + ad->x]), CELL_TYPE)) {
count++;
complete_line = 0;
}
}
if (complete_line)
complete_value = buf[ad->x];
}
}
*result = count;
G_free(sup);
return RLI_OK;
}
int patch_density(int fd, char **par, area_des ad, double *result)
{
CELL *buf, *sup;
int count = 0, i, j, connected = 0, complete_line = 1, other_above = 0;
double area;
struct Cell_head hd;
CELL complete_value;
double EW_DIST1, EW_DIST2, NS_DIST1, NS_DIST2;
int mask_fd = -1, *mask_buf, *mask_sup, null_count = 0;
Rast_set_c_null_value(&complete_value, 1);
Rast_get_cellhd(ad->raster, "", &hd);
sup = Rast_allocate_c_buf();
/* open mask if needed */
if (ad->mask == 1) {
if ((mask_fd = open(ad->mask_name, O_RDONLY, 0755)) < 0)
return 0;
mask_buf = malloc(ad->cl * sizeof(int));
mask_sup = malloc(ad->cl * sizeof(int));
}
/*calculate distance */
G_begin_distance_calculations();
/* EW Dist at North edge */
EW_DIST1 = G_distance(hd.east, hd.north, hd.west, hd.north);
/* EW Dist at South Edge */
EW_DIST2 = G_distance(hd.east, hd.south, hd.west, hd.south);
/* NS Dist at East edge */
NS_DIST1 = G_distance(hd.east, hd.north, hd.east, hd.south);
/* NS Dist at West edge */
NS_DIST2 = G_distance(hd.west, hd.north, hd.west, hd.south);
/*calculate number of patch */
for (i = 0; i < ad->rl; i++) {
buf = RLI_get_cell_raster_row(fd, i + ad->y, ad);
if (i > 0) {
sup = RLI_get_cell_raster_row(fd, i - 1 + ad->y, ad);
}
/* mask values */
if (ad->mask == 1) {
int k;
if (i > 0) {
int *tmp;
tmp = mask_sup;
mask_buf = mask_sup;
}
if (read(mask_fd, mask_buf, (ad->cl * sizeof(int))) < 0)
return 0;
for (k = 0; k < ad->cl; k++) {
if (mask_buf[k] == 0) {
Rast_set_c_null_value(mask_buf + k, 1);
null_count++;
}
}
}
if (complete_line) {
if (!Rast_is_null_value(&(buf[ad->x]), CELL_TYPE) &&
buf[ad->x] != complete_value)
count++;
for (j = 0; j < ad->cl - 1; j++) {
if (buf[j + ad->x] != buf[j + 1 + ad->x]) {
complete_line = 0;
if (!Rast_is_null_value(&(buf[j + 1 + ad->x]), CELL_TYPE)
&& buf[j + 1 + ad->x] != complete_value)
count++;
}
}
if (complete_line) {
complete_value = buf[ad->x];
}
}
else {
complete_line = 1;
connected = 0;
other_above = 0;
for (j = 0; j < ad->cl; j++) {
if (sup[j + ad->x] == buf[j + ad->x]) {
connected = 1;
if (other_above) {
other_above = 0;
count--;
}
}
else {
if (connected &&
!Rast_is_null_value(&(buf[j + ad->x]), CELL_TYPE))
other_above = 1;
}
if (j < ad->cl - 1 && buf[j + ad->x] != buf[j + 1 + ad->x]) {
complete_line = 0;
if (!connected &&
!Rast_is_null_value(&(buf[j + ad->x]), CELL_TYPE)) {
count++;
connected = 0;
other_above = 0;
}
else {
connected = 0;
other_above = 0;
}
}
}
if (!connected &&
sup[ad->cl - 1 + ad->x] != buf[ad->cl - 1 + ad->x]) {
if (!Rast_is_null_value
(&(buf[ad->cl - 1 + ad->x]), CELL_TYPE)) {
count++;
complete_line = 0;
}
}
if (complete_line)
complete_value = buf[ad->x];
}
}
area = (((EW_DIST1 + EW_DIST2) / 2) / hd.cols) *
(((NS_DIST1 + NS_DIST2) / 2) / hd.rows) *
(ad->rl * ad->cl - null_count);
if (area != 0)
*result = (count / area) * 1000000;
else
*result = -1;
G_free(sup);
return RLI_OK;
}
