Example #1
0
static PyObject *
Py_gstrf(PyObject *self, PyObject *args, PyObject *keywds)
{
    /* default value for SuperLU parameters*/
    int N, nnz;
    PyArrayObject *rowind, *colptr, *nzvals;
    SuperMatrix A;
    PyObject *result;
    PyObject *option_dict = NULL;
    int type;
    int ilu = 0;

    static char *kwlist[] = {"N","nnz","nzvals","colind","rowptr",
                             "options", "ilu",
                             NULL};

    int res = PyArg_ParseTupleAndKeywords(
        args, keywds, "iiO!O!O!|Oi", kwlist, 
        &N, &nnz,
        &PyArray_Type, &nzvals,
        &PyArray_Type, &rowind,
        &PyArray_Type, &colptr,
        &option_dict,
        &ilu);

    if (!res)
        return NULL;

    if (!_CHECK_INTEGER(colptr) || !_CHECK_INTEGER(rowind)) {
        PyErr_SetString(PyExc_TypeError,
                        "rowind and colptr must be of type cint");
        return NULL;
    }

    type = PyArray_TYPE(nzvals);
    if (!CHECK_SLU_TYPE(type)) {
        PyErr_SetString(PyExc_TypeError,
                        "nzvals is not of a type supported by SuperLU");
        return NULL;
    }

    if (NCFormat_from_spMatrix(&A, N, N, nnz, nzvals, rowind, colptr,
                               type)) {
        goto fail;
    }

    result = newSciPyLUObject(&A, option_dict, type, ilu);
    if (result == NULL) {
        goto fail;
    }

    /* arrays of input matrix will not be freed */  
    Destroy_SuperMatrix_Store(&A);
    return result;
  
fail:
    /* arrays of input matrix will not be freed */
    Destroy_SuperMatrix_Store(&A); 
    return NULL;
}
Example #2
0
static PyObject *
Py_sgstrf(PyObject *self, PyObject *args, PyObject *keywds) {

  /* default value for SuperLU parameters*/
  double diag_pivot_thresh = 1.0;
  double drop_tol = 0.0;
  int relax = 1;
  int panel_size = 10;
  int permc_spec = 2;
  int N, nnz;
  PyArrayObject *rowind, *colptr, *nzvals;
  SuperMatrix A;
  PyObject *result;
  
  static char *kwlist[] = {"N","nnz","nzvals","rowind","colptr","permc_spec","diag_pivot_thresh", "drop_tol", "relax", "panel_size", NULL};

  int res = PyArg_ParseTupleAndKeywords(args, keywds, "iiO!O!O!|iddii", kwlist, 
                                        &N, &nnz,
					&PyArray_Type, &nzvals,
                                        &PyArray_Type, &rowind,
                                        &PyArray_Type, &colptr,
					&permc_spec,
					&diag_pivot_thresh,
					&drop_tol,
					&relax,
					&panel_size);
  if (!res)
    return NULL;

  if (!_CHECK_INTEGER(colptr) || !_CHECK_INTEGER(rowind)) {
          PyErr_SetString(PyExc_TypeError, "colptr and rowind must be of type cint");
          return NULL;
  }

  if (NCFormat_from_spMatrix(&A, N, N, nnz, nzvals, rowind, colptr, PyArray_FLOAT)) goto fail;
 
  result = newSciPyLUObject(&A, diag_pivot_thresh, drop_tol, relax, panel_size,\
                            permc_spec, PyArray_FLOAT);
  if (result == NULL) goto fail;

  Destroy_SuperMatrix_Store(&A); /* arrays of input matrix will not be freed */  
  return result;

 fail:
  Destroy_SuperMatrix_Store(&A); /* arrays of input matrix will not be freed */
  return NULL;
}
Example #3
0
static PyObject *
Py_gssv(PyObject *self, PyObject *args, PyObject *kwdict)
{
    PyObject *Py_B=NULL, *Py_X=NULL;
    PyArrayObject *nzvals=NULL;
    PyArrayObject *colind=NULL, *rowptr=NULL;
    int N, nnz;
    int info;
    int csc=0;
    int *perm_r=NULL, *perm_c=NULL;
    SuperMatrix A, B, L, U;
    superlu_options_t options;
    SuperLUStat_t stat;
    PyObject *option_dict = NULL;
    int type;
    int ssv_finished = 0;

    static char *kwlist[] = {"N","nnz","nzvals","colind","rowptr","B", "csc",
                             "options",NULL};
    
    /* Get input arguments */
    if (!PyArg_ParseTupleAndKeywords(args, kwdict, "iiO!O!O!O|iO", kwlist,
                                     &N, &nnz, &PyArray_Type, &nzvals,
                                     &PyArray_Type, &colind, &PyArray_Type,
                                     &rowptr, &Py_B, &csc, &option_dict)) {
        return NULL;
    }

    if (!_CHECK_INTEGER(colind) || !_CHECK_INTEGER(rowptr)) {
        PyErr_SetString(PyExc_TypeError,
                        "colind and rowptr must be of type cint");
        return NULL;
    }

    type = PyArray_TYPE(nzvals);
    if (!CHECK_SLU_TYPE(type)) {
        PyErr_SetString(PyExc_TypeError,
                        "nzvals is not of a type supported by SuperLU");
        return NULL;
    }

    if (!set_superlu_options_from_dict(&options, 0, option_dict, NULL, NULL)) {
        return NULL;
    }

    /* Create Space for output */
    Py_X = PyArray_CopyFromObject(Py_B, type, 1, 2);
    if (Py_X == NULL) return NULL;

    if (csc) {
        if (NCFormat_from_spMatrix(&A, N, N, nnz, nzvals, colind, rowptr,
                                   type)) {
            Py_DECREF(Py_X);
            return NULL;
        }
    }
    else {
        if (NRFormat_from_spMatrix(&A, N, N, nnz, nzvals, colind, rowptr,
                                   type)) {
            Py_DECREF(Py_X);
            return NULL;
        }
    }
    
    if (DenseSuper_from_Numeric(&B, Py_X)) {
        Destroy_SuperMatrix_Store(&A);  
        Py_DECREF(Py_X);
        return NULL;
    }

    /* B and Py_X  share same data now but Py_X "owns" it */
    
    /* Setup options */
    
    if (setjmp(_superlu_py_jmpbuf)) {
        goto fail;
    }
    else {
        perm_c = intMalloc(N);
        perm_r = intMalloc(N);
        StatInit(&stat);

        /* Compute direct inverse of sparse Matrix */
        gssv(type, &options, &A, perm_c, perm_r, &L, &U, &B, &stat, &info);
    }
    ssv_finished = 1;

    SUPERLU_FREE(perm_r);
    SUPERLU_FREE(perm_c);
    Destroy_SuperMatrix_Store(&A);  /* holds just a pointer to the data */
    Destroy_SuperMatrix_Store(&B);
    Destroy_SuperNode_Matrix(&L);
    Destroy_CompCol_Matrix(&U);
    StatFree(&stat);
 
    return Py_BuildValue("Ni", Py_X, info);

fail:
    SUPERLU_FREE(perm_r);
    SUPERLU_FREE(perm_c);
    Destroy_SuperMatrix_Store(&A);  /* holds just a pointer to the data */
    Destroy_SuperMatrix_Store(&B);
    if (ssv_finished) {
        /* Avoid trying to free partially initialized matrices;
           might leak some memory, but avoids a crash */
        Destroy_SuperNode_Matrix(&L);
        Destroy_CompCol_Matrix(&U);
    }
    StatFree(&stat);  
    Py_XDECREF(Py_X);
    return NULL;
}
Example #4
0
static PyObject *Py_sgssv (PyObject *self, PyObject *args, PyObject *kwdict)
{
  PyObject *Py_B=NULL, *Py_X=NULL;
  PyArrayObject *nzvals=NULL;
  PyArrayObject *colind=NULL, *rowptr=NULL;
  int N, nnz;
  int info;
  int csc=0, permc_spec=2;
  int *perm_r=NULL, *perm_c=NULL;
  SuperMatrix A, B, L, U;
  superlu_options_t options;
  SuperLUStat_t stat;

  static char *kwlist[] = {"N","nnz","nzvals","colind","rowptr","B", "csc", "permc_spec",NULL};

  /* Get input arguments */
  if (!PyArg_ParseTupleAndKeywords(args, kwdict, "iiO!O!O!O|ii", kwlist, &N, &nnz, &PyArray_Type, &nzvals, &PyArray_Type, &colind, &PyArray_Type, &rowptr, &Py_B, &csc, &permc_spec))
    return NULL;

  if (!_CHECK_INTEGER(colind) || !_CHECK_INTEGER(rowptr)) {
          PyErr_SetString(PyExc_TypeError, "colind and rowptr must be of type cint");
          return NULL;
  }

  /* Create Space for output */
  Py_X = PyArray_CopyFromObject(Py_B,PyArray_FLOAT,1,2);

  if (Py_X == NULL) return NULL;

  if (csc) {
      if (NCFormat_from_spMatrix(&A, N, N, nnz, nzvals, colind, rowptr, PyArray_FLOAT)) {
          Py_DECREF(Py_X);
          return NULL;
      }
  }
  else {
      if (NRFormat_from_spMatrix(&A, N, N, nnz, nzvals, colind, rowptr, PyArray_FLOAT)) {
          Py_DECREF(Py_X);
          return NULL;
      }
  }
  
  if (DenseSuper_from_Numeric(&B, Py_X)) {
          Destroy_SuperMatrix_Store(&A);  
          Py_DECREF(Py_X);
          return NULL;
  }
  /* B and Py_X  share same data now but Py_X "owns" it */
    
  /* Setup options */
  
  if (setjmp(_superlu_py_jmpbuf)) goto fail;
  else {
      perm_c = intMalloc(N);
      perm_r = intMalloc(N);
      set_default_options(&options);
      options.ColPerm=superlu_module_getpermc(permc_spec);
      StatInit(&stat);

  /* Compute direct inverse of sparse Matrix */
      sgssv(&options, &A, perm_c, perm_r, &L, &U, &B, &stat, &info);
  }

  SUPERLU_FREE(perm_r);
  SUPERLU_FREE(perm_c);
  Destroy_SuperMatrix_Store(&A);
  Destroy_SuperMatrix_Store(&B);
  Destroy_SuperNode_Matrix(&L);
  Destroy_CompCol_Matrix(&U);
  StatFree(&stat);

  return Py_BuildValue("Ni", Py_X, info);

 fail:
  SUPERLU_FREE(perm_r);
  SUPERLU_FREE(perm_c);
  Destroy_SuperMatrix_Store(&A);
  Destroy_SuperMatrix_Store(&B);
  Destroy_SuperNode_Matrix(&L);
  Destroy_CompCol_Matrix(&U);
  StatFree(&stat);

  Py_XDECREF(Py_X);
  return NULL;
}