Example #1
0
/* Here is a driver inspired by A. Sheffer's "cow flattener". */
static NLboolean __nlFactorize_SUPERLU(__NLContext *context, NLint *permutation) {

	/* OpenNL Context */
	__NLSparseMatrix* M = (context->least_squares)? &context->MtM: &context->M;
	NLuint n = context->n;
	NLuint nnz = __nlSparseMatrixNNZ(M); /* number of non-zero coeffs */

	/* Compressed Row Storage matrix representation */
	NLint	*xa		= __NL_NEW_ARRAY(NLint, n+1);
	NLfloat	*rhs	= __NL_NEW_ARRAY(NLfloat, n);
	NLfloat	*a		= __NL_NEW_ARRAY(NLfloat, nnz);
	NLint	*asub	= __NL_NEW_ARRAY(NLint, nnz);
	NLint	*etree	= __NL_NEW_ARRAY(NLint, n);

	/* SuperLU variables */
	SuperMatrix At, AtP;
	NLint info, panel_size, relax;
	superlu_options_t options;

	/* Temporary variables */
	NLuint i, jj, count;
	
	__nl_assert(!(M->storage & __NL_SYMMETRIC));
	__nl_assert(M->storage & __NL_ROWS);
	__nl_assert(M->m == M->n);
	
	/* Convert M to compressed column format */
	for(i=0, count=0; i<n; i++) {
		__NLRowColumn *Ri = M->row + i;
		xa[i] = count;

		for(jj=0; jj<Ri->size; jj++, count++) {
			a[count] = Ri->coeff[jj].value;
			asub[count] = Ri->coeff[jj].index;
		}
	}
	xa[n] = nnz;

	/* Free M, don't need it anymore at this point */
	__nlSparseMatrixClear(M);

	/* Create superlu A matrix transposed */
	sCreate_CompCol_Matrix(
		&At, n, n, nnz, a, asub, xa, 
		SLU_NC,		/* Colum wise, no supernode */
		SLU_S,		/* floats */ 
		SLU_GE		/* general storage */
	);

	/* Set superlu options */
	set_default_options(&options);
	options.ColPerm = MY_PERMC;
	options.Fact = DOFACT;

	StatInit(&(context->slu.stat));

	panel_size = sp_ienv(1); /* sp_ienv give us the defaults */
	relax = sp_ienv(2);

	/* Compute permutation and permuted matrix */
	context->slu.perm_r = __NL_NEW_ARRAY(NLint, n);
	context->slu.perm_c = __NL_NEW_ARRAY(NLint, n);

	if ((permutation == NULL) || (*permutation == -1)) {
		get_perm_c(3, &At, context->slu.perm_c);

		if (permutation)
			memcpy(permutation, context->slu.perm_c, sizeof(NLint)*n);
	}
	else
		memcpy(context->slu.perm_c, permutation, sizeof(NLint)*n);

	sp_preorder(&options, &At, context->slu.perm_c, etree, &AtP);

	/* Decompose into L and U */
	sgstrf(&options, &AtP, relax, panel_size,
		etree, NULL, 0, context->slu.perm_c, context->slu.perm_r,
		&(context->slu.L), &(context->slu.U), &(context->slu.stat), &info);

	/* Cleanup */

	Destroy_SuperMatrix_Store(&At);
	Destroy_CompCol_Permuted(&AtP);

	__NL_DELETE_ARRAY(etree);
	__NL_DELETE_ARRAY(xa);
	__NL_DELETE_ARRAY(rhs);
	__NL_DELETE_ARRAY(a);
	__NL_DELETE_ARRAY(asub);

	context->slu.alloc_slu = NL_TRUE;

	return (info == 0);
}
Example #2
0
NLboolean nlVariableIsLocked(NLuint index) {
	__nl_assert(__nlCurrentContext->state != __NL_STATE_INITIAL);
	__nl_parano_range_assert(index, 0, __nlCurrentContext->nb_variables - 1);
	return __nlCurrentContext->variable[index].locked;
}
Example #3
0
static void __nlCheckState(NLenum state) {
	__nl_assert(__nlCurrentContext->state == state);
}
Example #4
0
NLfloat nlGetVariable(NLuint rhsindex, NLuint index) {
	__nl_assert(__nlCurrentContext->state != __NL_STATE_INITIAL);
	__nl_parano_range_assert(index, 0, __nlCurrentContext->nb_variables - 1);
	return __nlCurrentContext->variable[index].value[rhsindex];
}
Example #5
0
/* Here is a driver inspired by A. Sheffer's "cow flattener". */
static NLboolean __nlSolve_SUPERLU( NLboolean do_perm) {

    /* OpenNL Context */
    __NLSparseMatrix* M  = &(__nlCurrentContext->M);
    NLfloat* b          = __nlCurrentContext->b;
    NLfloat* x          = __nlCurrentContext->x;

    /* Compressed Row Storage matrix representation */
    NLuint    n      = __nlCurrentContext->n;
    NLuint    nnz    = __nlSparseMatrixNNZ(M); /* Number of Non-Zero coeffs */
    NLint*    xa     = __NL_NEW_ARRAY(NLint, n+1);
    NLfloat* rhs    = __NL_NEW_ARRAY(NLfloat, n);
    NLfloat* a      = __NL_NEW_ARRAY(NLfloat, nnz);
    NLint*    asub   = __NL_NEW_ARRAY(NLint, nnz);

    /* Permutation vector */
    NLint*    perm_r  = __NL_NEW_ARRAY(NLint, n);
    NLint*    perm    = __NL_NEW_ARRAY(NLint, n);

    /* SuperLU variables */
    SuperMatrix A, B; /* System       */
    SuperMatrix L, U; /* Inverse of A */
    NLint info;       /* status code  */
    DNformat *vals = NULL; /* access to result */
    float *rvals  = NULL; /* access to result */

    /* SuperLU options and stats */
    superlu_options_t options;
    SuperLUStat_t     stat;


    /* Temporary variables */
    __NLRowColumn* Ri = NULL;
    NLuint         i,jj,count;
    
    __nl_assert(!(M->storage & __NL_SYMMETRIC));
    __nl_assert(M->storage & __NL_ROWS);
    __nl_assert(M->m == M->n);
    
    
    /*
     * Step 1: convert matrix M into SuperLU compressed column 
     *   representation.
     * -------------------------------------------------------
     */

    count = 0;
    for(i=0; i<n; i++) {
        Ri = &(M->row[i]);
        xa[i] = count;
        for(jj=0; jj<Ri->size; jj++) {
            a[count]    = Ri->coeff[jj].value;
            asub[count] = Ri->coeff[jj].index;
            count++;
        }
    }
    xa[n] = nnz;

    /* Save memory for SuperLU */
    __nlSparseMatrixClear(M);


    /*
     * Rem: symmetric storage does not seem to work with
     * SuperLU ... (->deactivated in main SLS::Solver driver)
     */
    sCreate_CompCol_Matrix(
        &A, n, n, nnz, a, asub, xa, 
        SLU_NR,              /* Row_wise, no supernode */
        SLU_S,               /* floats                */ 
        SLU_GE               /* general storage        */
    );

    /* Step 2: create vector */
    sCreate_Dense_Matrix(
        &B, n, 1, b, n, 
        SLU_DN, /* Fortran-type column-wise storage */
        SLU_S,  /* floats                          */
        SLU_GE  /* general                          */
    );
            

    /* Step 3: get permutation matrix 
     * ------------------------------
     * com_perm: 0 -> no re-ordering
     *           1 -> re-ordering for A^t.A
     *           2 -> re-ordering for A^t+A
     *           3 -> approximate minimum degree ordering
     */
    get_perm_c(do_perm ? 3 : 0, &A, perm);

    /* Step 4: call SuperLU main routine
     * ---------------------------------
     */

    set_default_options(&options);
    options.ColPerm = MY_PERMC;
    StatInit(&stat);

    sgssv(&options, &A, perm, perm_r, &L, &U, &B, &stat, &info);

    /* Step 5: get the solution
     * ------------------------
     * Fortran-type column-wise storage
     */
    vals = (DNformat*)B.Store;
    rvals = (float*)(vals->nzval);
    if(info == 0) {
        for(i = 0; i <  n; i++){
            x[i] = rvals[i];
        }
    }

    /* Step 6: cleanup
     * ---------------
     */

    /*
     *  For these two ones, only the "store" structure
     * needs to be deallocated (the arrays have been allocated
     * by us).
     */
    Destroy_SuperMatrix_Store(&A);
    Destroy_SuperMatrix_Store(&B);

    
    /*
     *   These ones need to be fully deallocated (they have been
     * allocated by SuperLU).
     */
    Destroy_SuperNode_Matrix(&L);
    Destroy_CompCol_Matrix(&U);

    StatFree(&stat);

    __NL_DELETE_ARRAY(xa);
    __NL_DELETE_ARRAY(rhs);
    __NL_DELETE_ARRAY(a);
    __NL_DELETE_ARRAY(asub);
    __NL_DELETE_ARRAY(perm_r);
    __NL_DELETE_ARRAY(perm);

    return (info == 0);
}