Example #1
0
static ReadSlide *
readslide_new( const char *filename, VipsImage *out, 
	int level, gboolean autocrop, const char *associated )
{
	ReadSlide *rslide;
	int64_t w, h;
	const char *error;
	const char *background;
	const char * const *properties;
	char *associated_names;

	if( level && 
		associated ) {
		vips_error( "openslide2vips",
			"%s", _( "specify only one of level or associated "
			"image" ) );
		return( NULL );
	}

	rslide = VIPS_NEW( out, ReadSlide );
	memset( rslide, 0, sizeof( *rslide ) );
	g_signal_connect( out, "close", G_CALLBACK( readslide_destroy_cb ),
		rslide );

	rslide->level = level;
	rslide->autocrop = autocrop;
	rslide->associated = g_strdup( associated );

	/* Non-crazy defaults, override below if we can.
	 */
	rslide->tile_width = 256;
	rslide->tile_height = 256;

	rslide->osr = openslide_open( filename );
	if( rslide->osr == NULL ) {
		vips_error( "openslide2vips", 
			"%s", _( "unsupported slide format" ) );
		return( NULL );
	}

	error = openslide_get_error( rslide->osr );
	if( error ) {
		vips_error( "openslide2vips",
			_( "opening slide: %s" ), error );
		return( NULL );
	}

	if( level < 0 || 
		level >= openslide_get_level_count( rslide->osr ) ) {
		vips_error( "openslide2vips",
			"%s", _( "invalid slide level" ) );
		return( NULL );
	}

	if( associated &&
		check_associated_image( rslide->osr, associated ) )
		return( NULL );

	if( associated ) {
		openslide_get_associated_image_dimensions( rslide->osr,
			associated, &w, &h );
		vips_image_set_string( out, "slide-associated-image",
			associated );
		vips_image_pipelinev( out, VIPS_DEMAND_STYLE_THINSTRIP, NULL );
	} 
	else {
		char buf[256];
		const char *value;

		openslide_get_level_dimensions( rslide->osr,
			level, &w, &h );
		rslide->downsample = openslide_get_level_downsample(
			rslide->osr, level );
		vips_image_set_int( out, "slide-level", level );
		vips_image_pipelinev( out, VIPS_DEMAND_STYLE_SMALLTILE, NULL );

		/* Try to get tile width/height. An undocumented, experimental
		 * feature.
		 */
		vips_snprintf( buf, 256, 
			"openslide.level[%d].tile-width", level );
		if( (value = openslide_get_property_value( rslide->osr, buf )) )
			rslide->tile_width = atoi( value );
		vips_snprintf( buf, 256, 
			"openslide.level[%d].tile-height", level );
		if( (value = openslide_get_property_value( rslide->osr, buf )) )
			rslide->tile_height = atoi( value );
		if( value )
			VIPS_DEBUG_MSG( "readslide_new: found tile-size\n" );

		/* Some images have a bounds in the header. Crop to 
		 * that if autocrop is set. 
		 */
		if( rslide->autocrop ) 
			if( !get_bounds( rslide->osr, &rslide->bounds ) )
				rslide->autocrop = FALSE; 
		if( rslide->autocrop ) {
			VipsRect image;

			rslide->bounds.left /= rslide->downsample;
			rslide->bounds.top /= rslide->downsample;
			rslide->bounds.width /= rslide->downsample;
			rslide->bounds.height /= rslide->downsample;

			/* Clip against image size.
			 */
			image.left = 0;
			image.top = 0;
			image.width = w;
			image.height = h;
			vips_rect_intersectrect( &rslide->bounds, &image, 
				&rslide->bounds );

			/* If we've clipped to nothing, ignore bounds.
			 */
			if( vips_rect_isempty( &rslide->bounds ) )
				rslide->autocrop = FALSE;
		}
		if( rslide->autocrop ) {
			w = rslide->bounds.width;
			h = rslide->bounds.height;
		}
	}

	rslide->bg = 0xffffff;
	if( (background = openslide_get_property_value( rslide->osr,
		OPENSLIDE_PROPERTY_NAME_BACKGROUND_COLOR )) )
		rslide->bg = strtoul( background, NULL, 16 );

	if( w <= 0 || 
		h <= 0 || 
		rslide->downsample < 0 ) {
		vips_error( "openslide2vips", _( "getting dimensions: %s" ),
			openslide_get_error( rslide->osr ) );
		return( NULL );
	}
	if( w > INT_MAX || 
		h > INT_MAX ) {
		vips_error( "openslide2vips",
			"%s", _( "image dimensions overflow int" ) );
		return( NULL );
	}

	if( !rslide->autocrop ) {
		rslide->bounds.left = 0;
		rslide->bounds.top = 0;
		rslide->bounds.width = w;
		rslide->bounds.height = h;
	}

	vips_image_init_fields( out, w, h, 4, VIPS_FORMAT_UCHAR,
		VIPS_CODING_NONE, VIPS_INTERPRETATION_RGB, 1.0, 1.0 );

	for( properties = openslide_get_property_names( rslide->osr );
		*properties != NULL; properties++ )
		vips_image_set_string( out, *properties,
			openslide_get_property_value( rslide->osr,
			*properties ) );

	associated_names = g_strjoinv( ", ", (char **)
		openslide_get_associated_image_names( rslide->osr ) );
	vips_image_set_string( out, 
		"slide-associated-images", associated_names );
	VIPS_FREE( associated_names );

	return( rslide );
}
Example #2
0
static ReadSlide *
readslide_new( const char *filename, VipsImage *out, 
	int layer, const char *associated )
{
	ReadSlide *rslide;
	int64_t w, h;
	const char *background;
	const char * const *properties;

	rslide = VIPS_NEW( out, ReadSlide );
	memset( rslide, 0, sizeof( *rslide ) );
	g_signal_connect( out, "close", G_CALLBACK( readslide_destroy_cb ),
		rslide );

	rslide->layer = layer;
	rslide->associated = g_strdup( associated );

	rslide->osr = openslide_open( filename );
	if( rslide->osr == NULL ) {
		vips_error( "openslide2vips", 
			"%s", _( "failure opening slide" ) );
		return( NULL );
	}

	if( layer < 0 || 
		layer >= openslide_get_layer_count( rslide->osr ) ) {
		vips_error( "openslide2vips",
			"%s", _( "invalid slide level" ) );
		return( NULL );
	}

	if( associated &&
		check_associated_image( rslide->osr, associated ) )
		return( NULL );

	if( associated ) {
		openslide_get_associated_image_dimensions( rslide->osr,
			associated, &w, &h );
		vips_image_set_string( out, "slide-associated-image",
			associated );
		vips_demand_hint( out, VIPS_DEMAND_STYLE_THINSTRIP, NULL );
	} 
	else {
		openslide_get_layer_dimensions( rslide->osr, 
			layer, &w, &h );
		rslide->downsample = openslide_get_layer_downsample(
			rslide->osr, layer );
		vips_image_set_int( out, "slide-level", layer );
		vips_demand_hint( out, VIPS_DEMAND_STYLE_SMALLTILE, NULL );
	}

	/* This tag is used by argb2rgba() to paint fully-transparent pixels.
	 */
	background = openslide_get_property_value( rslide->osr,
		OPENSLIDE_PROPERTY_NAME_BACKGROUND_COLOR );
	if( background != NULL )
		vips_image_set_int( out, 
			VIPS_META_BACKGROUND_RGB, 
			strtoul( background, NULL, 16 ) );
	else
		vips_image_set_int( out, VIPS_META_BACKGROUND_RGB, 0xffffff );

	if( w < 0 || h < 0 || rslide->downsample < 0 ) {
		vips_error( "openslide2vips", _( "getting dimensions: %s" ),
			openslide_get_error( rslide->osr ) );
		return( NULL );
	}
	if( w > INT_MAX || 
		h > INT_MAX ) {
		vips_error( "openslide2vips",
			"%s", _( "image dimensions overflow int" ) );
		return( NULL );
	}

	vips_image_init_fields( out, w, h, 4, VIPS_FORMAT_UCHAR,
		VIPS_CODING_NONE, VIPS_INTERPRETATION_RGB, 1.0, 1.0 );

	for( properties = openslide_get_property_names( rslide->osr );
		*properties != NULL; properties++ )
		vips_image_set_string( out, *properties,
			openslide_get_property_value( rslide->osr,
			*properties ) );

	associated = g_strjoinv( ", ", (char **)
		openslide_get_associated_image_names( rslide->osr ) );
	vips_image_set_string( out, "slide-associated-images", associated );

	return( rslide );
}