Example #1
0
main(int argc, char *argv[])
{
    SuperMatrix A;
    NCformat *Astore;
    double   *a;
    int      *asub, *xa;
    int      *perm_c; /* column permutation vector */
    int      *perm_r; /* row permutations from partial pivoting */
    SuperMatrix L;      /* factor L */
    SCformat *Lstore;
    SuperMatrix U;      /* factor U */
    NCformat *Ustore;
    SuperMatrix B;
    int      nrhs, ldx, info, m, n, nnz;
    double   *xact, *rhs;
    mem_usage_t   mem_usage;
    superlu_options_t options;
    SuperLUStat_t stat;

#if ( DEBUGlevel>=1 )
    CHECK_MALLOC("Enter main()");
#endif

    /* Set the default input options:
        options.Fact = DOFACT;
        options.Equil = YES;
        options.ColPerm = COLAMD;
        options.DiagPivotThresh = 1.0;
        options.Trans = NOTRANS;
        options.IterRefine = NOREFINE;
        options.SymmetricMode = NO;
        options.PivotGrowth = NO;
        options.ConditionNumber = NO;
        options.PrintStat = YES;
     */
    set_default_options(&options);

    /* Now we modify the default options to use the symmetric mode. */
    options.SymmetricMode = YES;
    options.ColPerm = MMD_AT_PLUS_A;
    options.DiagPivotThresh = 0.001;

#if 1
    /* Read matrix A from a file in Harwell-Boeing format.*/
    if (argc < 2)
    {
        printf("Usage:\n%s [OPTION] < [INPUT] > [OUTPUT]\nOPTION:\n"
                "-h -hb:\n\t[INPUT] is a Harwell-Boeing format matrix.\n"
                "-r -rb:\n\t[INPUT] is a Rutherford-Boeing format matrix.\n"
                "-t -triplet:\n\t[INPUT] is a triplet format matrix.\n",
                argv[0]);
        return 0;
    }
    else
    {
        switch (argv[1][1])
        {
            case 'H':
            case 'h':
                printf("Input a Harwell-Boeing format matrix:\n");
                dreadhb(&m, &n, &nnz, &a, &asub, &xa);
                break;
            case 'R':
            case 'r':
                printf("Input a Rutherford-Boeing format matrix:\n");
                dreadrb(&m, &n, &nnz, &a, &asub, &xa);
                break;
            case 'T':
            case 't':
                printf("Input a triplet format matrix:\n");
                dreadtriple(&m, &n, &nnz, &a, &asub, &xa);
                break;
            default:
                printf("Unrecognized format.\n");
                return 0;
        }
    }
#else
    /* Read the matrix in Harwell-Boeing format. */
    dreadhb(&m, &n, &nnz, &a, &asub, &xa);
#endif

    dCreate_CompCol_Matrix(&A, m, n, nnz, a, asub, xa, SLU_NC, SLU_D, SLU_GE);
    Astore = A.Store;
    printf("Dimension %dx%d; # nonzeros %d\n", A.nrow, A.ncol, Astore->nnz);

    nrhs   = 1;
    if ( !(rhs = doubleMalloc(m * nrhs)) ) ABORT("Malloc fails for rhs[].");
    dCreate_Dense_Matrix(&B, m, nrhs, rhs, m, SLU_DN, SLU_D, SLU_GE);
    xact = doubleMalloc(n * nrhs);
    ldx = n;
    dGenXtrue(n, nrhs, xact, ldx);
    dFillRHS(options.Trans, nrhs, xact, ldx, &A, &B);

    if ( !(perm_c = intMalloc(n)) ) ABORT("Malloc fails for perm_c[].");
    if ( !(perm_r = intMalloc(m)) ) ABORT("Malloc fails for perm_r[].");

    /* Initialize the statistics variables. */
    StatInit(&stat);

    dgssv(&options, &A, perm_c, perm_r, &L, &U, &B, &stat, &info);

    if ( info == 0 ) {

        /* This is how you could access the solution matrix. */
        double *sol = (double*) ((DNformat*) B.Store)->nzval;

         /* Compute the infinity norm of the error. */
        dinf_norm_error(nrhs, &B, xact);

        Lstore = (SCformat *) L.Store;
        Ustore = (NCformat *) U.Store;
        printf("No of nonzeros in factor L = %d\n", Lstore->nnz);
        printf("No of nonzeros in factor U = %d\n", Ustore->nnz);
        printf("No of nonzeros in L+U = %d\n", Lstore->nnz + Ustore->nnz - n);
        printf("FILL ratio = %.1f\n", (float)(Lstore->nnz + Ustore->nnz - n)/nnz);

        dQuerySpace(&L, &U, &mem_usage);
        printf("L\\U MB %.3f\ttotal MB needed %.3f\n",
               mem_usage.for_lu/1e6, mem_usage.total_needed/1e6);

    } else {
        printf("dgssv() error returns INFO= %d\n", info);
        if ( info <= n ) { /* factorization completes */
            dQuerySpace(&L, &U, &mem_usage);
            printf("L\\U MB %.3f\ttotal MB needed %.3f\n",
                   mem_usage.for_lu/1e6, mem_usage.total_needed/1e6);
        }
    }

    if ( options.PrintStat ) StatPrint(&stat);
    StatFree(&stat);

    SUPERLU_FREE (rhs);
    SUPERLU_FREE (xact);
    SUPERLU_FREE (perm_r);
    SUPERLU_FREE (perm_c);
    Destroy_CompCol_Matrix(&A);
    Destroy_SuperMatrix_Store(&B);
    Destroy_SuperNode_Matrix(&L);
    Destroy_CompCol_Matrix(&U);

#if ( DEBUGlevel>=1 )
    CHECK_MALLOC("Exit main()");
#endif
}
Example #2
0
main(int argc, char *argv[])
{
    SuperMatrix A, AC, L, U, B;
    NCformat    *Astore;
    SCPformat   *Lstore;
    NCPformat   *Ustore;
    superlumt_options_t superlumt_options;
    pxgstrf_shared_t pxgstrf_shared;
    pdgstrf_threadarg_t *pdgstrf_threadarg;
    int         nprocs;
    fact_t      fact;
    trans_t     trans;
    yes_no_t    refact, usepr;
    double      u, drop_tol;
    double      *a;
    int         *asub, *xa;
    int         *perm_c; /* column permutation vector */
    int         *perm_r; /* row permutations from partial pivoting */
    void        *work;
    int         info, lwork, nrhs, ldx; 
    int         m, n, nnz, permc_spec, panel_size, relax;
    int         i, firstfact;
    double      *rhsb, *xact;
    Gstat_t Gstat;
    flops_t     flopcnt;
    void parse_command_line();

    /* Default parameters to control factorization. */
    nprocs = 1;
    fact  = EQUILIBRATE;
    trans = NOTRANS;
    panel_size = sp_ienv(1);
    relax = sp_ienv(2);
    u     = 1.0;
    usepr = NO;
    drop_tol = 0.0;
    work = NULL;
    lwork = 0;
    nrhs  = 1;

    /* Get the number of processes from command line. */
    parse_command_line(argc, argv, &nprocs);

    /* Read the input matrix stored in Harwell-Boeing format. */
    dreadhb(&m, &n, &nnz, &a, &asub, &xa);

    /* Set up the sparse matrix data structure for A. */
    dCreate_CompCol_Matrix(&A, m, n, nnz, a, asub, xa, SLU_NC, SLU_D, SLU_GE);

    if (!(rhsb = doubleMalloc(m * nrhs))) SUPERLU_ABORT("Malloc fails for rhsb[].");
    dCreate_Dense_Matrix(&B, m, nrhs, rhsb, m, SLU_DN, SLU_D, SLU_GE);
    xact = doubleMalloc(n * nrhs);
    ldx = n;
    dGenXtrue(n, nrhs, xact, ldx);
    dFillRHS(trans, nrhs, xact, ldx, &A, &B);
    
    if (!(perm_r = intMalloc(m))) SUPERLU_ABORT("Malloc fails for perm_r[].");
    if (!(perm_c = intMalloc(n))) SUPERLU_ABORT("Malloc fails for perm_c[].");


    /********************************
     * THE FIRST TIME FACTORIZATION *
     ********************************/

    /* ------------------------------------------------------------
       Allocate storage and initialize statistics variables. 
       ------------------------------------------------------------*/
    StatAlloc(n, nprocs, panel_size, relax, &Gstat);
    StatInit(n, nprocs, &Gstat);

    /* ------------------------------------------------------------
       Get column permutation vector perm_c[], according to permc_spec:
       permc_spec = 0: natural ordering 
       permc_spec = 1: minimum degree ordering on structure of A'*A
       permc_spec = 2: minimum degree ordering on structure of A'+A
       permc_spec = 3: approximate minimum degree for unsymmetric matrices
       ------------------------------------------------------------*/ 	
    permc_spec = 1;
    get_perm_c(permc_spec, &A, perm_c);

    /* ------------------------------------------------------------
       Initialize the option structure superlumt_options using the
       user-input parameters;
       Apply perm_c to the columns of original A to form AC.
       ------------------------------------------------------------*/
    refact= NO;
    pdgstrf_init(nprocs, fact, trans, refact, panel_size, relax,
		 u, usepr, drop_tol, perm_c, perm_r,
		 work, lwork, &A, &AC, &superlumt_options, &Gstat);

    /* ------------------------------------------------------------
       Compute the LU factorization of A.
       The following routine will create nprocs threads.
       ------------------------------------------------------------*/
    pdgstrf(&superlumt_options, &AC, perm_r, &L, &U, &Gstat, &info);
    
    flopcnt = 0;
    for (i = 0; i < nprocs; ++i) flopcnt += Gstat.procstat[i].fcops;
    Gstat.ops[FACT] = flopcnt;

    /* ------------------------------------------------------------
       Solve the system A*X=B, overwriting B with X.
       ------------------------------------------------------------*/
    dgstrs(trans, &L, &U, perm_r, perm_c, &B, &Gstat, &info);
    
    printf("\n** Result of sparse LU **\n");
    dinf_norm_error(nrhs, &B, xact); /* Check inf. norm of the error */

    Destroy_CompCol_Permuted(&AC); /* Free extra arrays in AC. */


    /*********************************
     * THE SUBSEQUENT FACTORIZATIONS *
     *********************************/

    /* ------------------------------------------------------------
       Re-initialize statistics variables and options used by the
       factorization routine pdgstrf().
       ------------------------------------------------------------*/
    StatInit(n, nprocs, &Gstat);
    refact= YES;
    pdgstrf_init(nprocs, fact, trans, refact, panel_size, relax,
		 u, usepr, drop_tol, perm_c, perm_r,
		 work, lwork, &A, &AC, &superlumt_options, &Gstat);

    /* ------------------------------------------------------------
       Compute the LU factorization of A.
       The following routine will create nprocs threads.
       ------------------------------------------------------------*/
    pdgstrf(&superlumt_options, &AC, perm_r, &L, &U, &Gstat, &info);
    
    flopcnt = 0;
    for (i = 0; i < nprocs; ++i) flopcnt += Gstat.procstat[i].fcops;
    Gstat.ops[FACT] = flopcnt;

    /* ------------------------------------------------------------
       Re-generate right-hand side B, then solve A*X= B.
       ------------------------------------------------------------*/
    dFillRHS(trans, nrhs, xact, ldx, &A, &B);
    dgstrs(trans, &L, &U, perm_r, perm_c, &B, &Gstat, &info);

    
     /* ------------------------------------------------------------
       Deallocate storage after factorization.
       ------------------------------------------------------------*/
    pxgstrf_finalize(&superlumt_options, &AC);

    printf("\n** Result of sparse LU **\n");
    dinf_norm_error(nrhs, &B, xact); /* Check inf. norm of the error */

    Lstore = (SCPformat *) L.Store;
    Ustore = (NCPformat *) U.Store;
    printf("No of nonzeros in factor L = %d\n", Lstore->nnz);
    printf("No of nonzeros in factor U = %d\n", Ustore->nnz);
    printf("No of nonzeros in L+U = %d\n", Lstore->nnz + Ustore->nnz - n);
    fflush(stdout);

    SUPERLU_FREE (rhsb);
    SUPERLU_FREE (xact);
    SUPERLU_FREE (perm_r);
    SUPERLU_FREE (perm_c);
    Destroy_CompCol_Matrix(&A);
    Destroy_SuperMatrix_Store(&B);
    if ( lwork >= 0 ) {
        Destroy_SuperNode_SCP(&L);
        Destroy_CompCol_NCP(&U);
    }
    StatFree(&Gstat);
}