PairBaseCodonModel * make_flat_PairBaseCodonModel(CompProb * cp,Probability nonm,Probability gap,CodonTable * ct) { CodonMatrix * cm; PairBaseCodonModel * out; cm = naive_CodonMatrix(ct,cp); out = make_PairBaseCodonModel(cm,nonm,gap,ct); free_CodonMatrix(cm); return out; }
CodonMatrixScore * naive_CodonMatrixScore_from_prob(CodonTable * ct,CompProb * cm) { CodonMatrixScore * out; CodonMatrix * com; com = naive_CodonMatrix(ct,cm); out = CodonMatrixScore_from_CodonMatrix(com); free_CodonMatrix(com); return out; }