/* Used only for structure field arrays*/ static void generate_fieldarray(Symbol* basetype, NCConstant* con, Dimset* dimset, Bytebuffer* codebuf, Datalist* filler, Generator* generator) { int i; int chartype = (basetype->typ.typecode == NC_CHAR); Datalist* data; ASSERT(dimset->ndims > 0); if(con != NULL && !isfillconst(con)) data = con->value.compoundv; else data = NULL; if(chartype) { /* Collect the char field in a separate buffer */ Bytebuffer* charbuf = bbNew(); gen_chararray(dimset,data,charbuf,filler); generator->charconstant(generator,codebuf,charbuf); bbFree(charbuf); } else { int uid; size_t xproduct = crossproduct(dimset,0,0); /* compute total number of elements */ generator->listbegin(generator,LISTFIELDARRAY,xproduct,codebuf,&uid); for(i=0;i<xproduct;i++) { con = (data == NULL ? NULL : datalistith(data,i)); generator->list(generator,LISTFIELDARRAY,uid,i,codebuf); generate_basetype(basetype,con,codebuf,NULL,generator); } generator->listend(generator,LISTFIELDARRAY,uid,i,codebuf); } }
void generate_vardata(Symbol* vsym, Generator* generator, Writer writer, Bytebuffer* code) { Dimset* dimset = &vsym->typ.dimset; int rank = dimset->ndims; Symbol* basetype = vsym->typ.basetype; Datalist* filler = getfiller(vsym); const size_t* start; const size_t* count; Odometer* odom; if(vsym->data == NULL) return; /* give the buffer a running start to be large enough*/ if(!bbSetalloc(code, nciterbuffersize)) return; if(rank == 0) {/*scalar case*/ NCConstant* c0 = datalistith(vsym->data,0); generate_basetype(basetype,c0,code,filler,generator); writer(generator,vsym,code,0,NULL,NULL); } else {/*rank > 0*/ /* First, create an odometer using all of the dimensions */ odom = newodometer(dimset,NULL,NULL); start = odometerstartvector(odom); count = odometercountvector(odom); generate_array(vsym,code,filler,generator,writer); } }
void generate_attrdata(Symbol* asym, Generator* generator, Writer writer, Bytebuffer* codebuf) { Symbol* basetype = asym->typ.basetype; nc_type typecode = basetype->typ.typecode; if(typecode == NC_CHAR) { gen_charattr(asym->data,codebuf); } else { int uid; size_t count; generator->listbegin(generator,LISTATTR,asym->data->length,codebuf,&uid); for(count=0;count<asym->data->length;count++) { NCConstant* con = datalistith(asym->data,count); generator->list(generator,LISTATTR,uid,count,codebuf); generate_basetype(asym->typ.basetype,con,codebuf,NULL,generator); } generator->listend(generator,LISTATTR,uid,count,codebuf); } writer(generator,asym,codebuf,0,NULL,NULL); }
void generate_vardata(Symbol* vsym, Generator* generator, Writer writer, Bytebuffer* code) { Dimset* dimset = &vsym->typ.dimset; int rank = dimset->ndims; Symbol* basetype = vsym->typ.basetype; Datalist* filler = getfiller(vsym); if(vsym->data == NULL) return; /* give the buffer a running start to be large enough*/ bbSetalloc(code, nciterbuffersize); if(rank == 0) {/*scalar case*/ Constant* c0 = datalistith(vsym->data,0); generate_basetype(basetype,c0,code,filler,generator); writer(generator,vsym,code,0,NULL,NULL); } else {/*rank > 0*/ generate_array(vsym,code,filler,generator,writer); } }
static void generate_array(Symbol* vsym, Bytebuffer* code, Datalist* filler, Generator* generator, Writer writer ) { Dimset* dimset = &vsym->typ.dimset; int rank = dimset->ndims; Symbol* basetype = vsym->typ.basetype; nc_type typecode = basetype->typ.typecode; Odometer* odom; nciter_t iter; ASSERT(rank > 0); /* Start by doing easy cases */ #ifdef CHARBUG if(typecode == NC_CHAR) { /* case: character typed variable, rank > 0 */ Bytebuffer* charbuf = bbNew(); gen_chararray(dimset,vsym->data,charbuf,filler); generator->charconstant(generator,code,charbuf); bbFree(charbuf); odom = newodometer(dimset,NULL,NULL); writer(generator,vsym,code,odom->rank,odom->start,odom->count); } else #else /*!CHARBUG*/ /* Case: char var && dim 1..n are not unlimited */ if(findunlimited(dimset,1) == rank && typecode == NC_CHAR) { Bytebuffer* charbuf = bbNew(); gen_leafchararray(dimset,0,vsym->data,charbuf,filler); generator->charconstant(generator,code,charbuf); bbFree(charbuf); odom = newodometer(dimset,NULL,NULL); writer(generator,vsym,code,odom->rank,odom->start,odom->count); } else #endif /* Case 2: dim 1..n are not unlimited */ if(findunlimited(dimset,1) == rank) { size_t offset = 0; /* where are we in the data list */ size_t nelems = 0; /* # of data list items to read */ /* Create an iterator and odometer and just walk the datalist */ nc_get_iter(vsym,nciterbuffersize,&iter); odom = newodometer(dimset,NULL,NULL); for(;;offset+=nelems) { int i,uid; nelems=nc_next_iter(&iter,odom->start,odom->count); if(nelems == 0) break; bbClear(code); generator->listbegin(generator,LISTDATA,vsym->data->length,code,&uid); for(i=0;i<nelems;i++) { #ifdef ITERBUG Constant* con = datalistith(vsym->data,i); #else NCConstant* con = datalistith(vsym->data,i+offset); #endif generator->list(generator,LISTDATA,uid,i,code); #ifdef USE_NOFILL if(nofill_flag && con == NULL) break; else #endif generate_basetype(basetype,con,code,filler,generator); } generator->listend(generator,LISTDATA,uid,i,code); #ifdef USE_NOFILL writer(generator,vsym,code,rank,odom->start,odom->index); #else writer(generator,vsym,code,rank,odom->start,odom->count); #endif } } else { /* Hard case: multiple unlimited dimensions */ /* Setup iterator and odometer */ #ifdef CHARBUG nc_get_iter(vsym,nciterbuffersize,&iter); #else nc_get_iter(vsym,NC_MAX_UINT,&iter); /* effectively infinite */ #endif odom = newodometer(dimset,NULL,NULL); for(;;) {/* iterate in nelem chunks */ /* get nelems count and modify odometer */ size_t nelems=nc_next_iter(&iter,odom->start,odom->count); if(nelems == 0) break; generate_arrayr(vsym,code,vsym->data, odom, /*dim index=*/0, filler,generator ); #ifdef USE_NOFILL writer(generator,vsym,code,odom->rank,odom->start,odom->index); #else writer(generator,vsym,code,odom->rank,odom->start,odom->count); #endif } } odometerfree(odom); }
/* Generate an instance of the basetype */ void generate_basetype(Symbol* tsym, NCConstant* con, Bytebuffer* codebuf, Datalist* filler, Generator* generator) { Datalist* data; switch (tsym->subclass) { case NC_ENUM: case NC_OPAQUE: case NC_PRIM: if(islistconst(con)) { semerror(constline(con),"Expected primitive found {..}"); } generate_primdata(tsym,con,codebuf,filler,generator); break; case NC_COMPOUND: { int i,uid, nfields, dllen; if(con == NULL || isfillconst(con)) { Datalist* fill = (filler==NULL?getfiller(tsym):filler); ASSERT(fill->length == 1); con = &fill->data[0]; if(!islistconst(con)) semerror(con->lineno,"Compound data fill value is not enclosed in {..}"); } if(!islistconst(con)) {/* fail on no compound*/ semerror(constline(con),"Compound data must be enclosed in {..}"); } data = con->value.compoundv; nfields = listlength(tsym->subnodes); dllen = datalistlen(data); if(dllen > nfields) { semerror(con->lineno,"Datalist longer than the number of compound fields"); break; } generator->listbegin(generator,LISTCOMPOUND,listlength(tsym->subnodes),codebuf,&uid); for(i=0;i<nfields;i++) { Symbol* field = (Symbol*)listget(tsym->subnodes,i); con = datalistith(data,i); generator->list(generator,LISTCOMPOUND,uid,i,codebuf); generate_basetype(field,con,codebuf,NULL,generator); } generator->listend(generator,LISTCOMPOUND,uid,i,codebuf); } break; case NC_VLEN: { Bytebuffer* vlenbuf; int uid; size_t count; if(con == NULL || isfillconst(con)) { Datalist* fill = (filler==NULL?getfiller(tsym):filler); ASSERT(fill->length == 1); con = &fill->data[0]; if(con->nctype != NC_COMPOUND) { semerror(con->lineno,"Vlen data fill value is not enclosed in {..}"); } } if(!islistconst(con)) { semerror(constline(con),"Vlen data must be enclosed in {..}"); } data = con->value.compoundv; /* generate the nc_vlen_t instance*/ vlenbuf = bbNew(); if(tsym->typ.basetype->typ.typecode == NC_CHAR) { gen_charvlen(data,vlenbuf); generator->vlenstring(generator,vlenbuf,&uid,&count); } else { generator->listbegin(generator,LISTVLEN,data->length,codebuf,&uid); for(count=0;count<data->length;count++) { NCConstant* con; generator->list(generator,LISTVLEN,uid,count,vlenbuf); con = datalistith(data,count); generate_basetype(tsym->typ.basetype,con,vlenbuf,NULL,generator); } generator->listend(generator,LISTVLEN,uid,count,codebuf,(void*)vlenbuf); } generator->vlendecl(generator,codebuf,tsym,uid,count,vlenbuf); bbFree(vlenbuf); } break; case NC_FIELD: if(tsym->typ.dimset.ndims > 0) { /* Verify that we have a sublist (or fill situation) */ if(con != NULL && !isfillconst(con) && !islistconst(con)) semerror(constline(con),"Dimensioned fields must be enclose in {...}"); generate_fieldarray(tsym->typ.basetype,con,&tsym->typ.dimset,codebuf,filler,generator); } else { generate_basetype(tsym->typ.basetype,con,codebuf,NULL,generator); } break; default: PANIC1("generate_basetype: unexpected subclass %d",tsym->subclass); } }
static void generate_arrayr(Symbol* vsym, Bytebuffer* code, Datalist* list, Odometer* odom, int dimindex, Datalist* filler, Generator* generator ) { Symbol* basetype = vsym->typ.basetype; Dimset* dimset = &vsym->typ.dimset; int rank = dimset->ndims; int lastunlimited; int typecode = basetype->typ.typecode; lastunlimited = findlastunlimited(dimset); if(lastunlimited == rank) lastunlimited = 0; ASSERT(rank > 0); ASSERT(dimindex >= 0 && dimindex < rank); #ifdef CHARBUG ASSERT(typecode != NC_CHAR); #else /*!CHARBUG*/ if(dimindex == lastunlimited && typecode == NC_CHAR) { Bytebuffer* charbuf = bbNew(); gen_leafchararray(dimset,dimindex,list,charbuf,filler); generator->charconstant(generator,code,charbuf); bbFree(charbuf); } else #endif /*!CHARBUG*/ if(dimindex == lastunlimited) { int uid,i; Odometer* slabodom; /* build a special odometer to walk the last few dimensions (similar to case 2 above) */ slabodom = newsubodometer(odom,dimset,dimindex,rank); /* compute the starting offset in our datalist (Assumes that slabodom->index[i] == slabodom->start[i]) */ generator->listbegin(generator,LISTDATA,list->length,code,&uid); for(i=0;odometermore(slabodom);i++) { size_t offset = odometeroffset(slabodom); NCConstant* con = datalistith(list,offset); #ifdef USE_NOFILL if(nofill_flag && con == NULL) break; #endif generator->list(generator,LISTDATA,uid,i,code); generate_basetype(basetype,con,code,filler,generator); odometerincr(slabodom); } generator->listend(generator,LISTDATA,uid,i,code); odometerfree(slabodom); } else { /* If we are strictly to the left of the next unlimited then our datalist is a list of compounds representing the next unlimited; so walk the subarray from this index upto next unlimited. */ int i; Odometer* slabodom; int nextunlimited = findunlimited(dimset,dimindex+1); ASSERT((dimindex < nextunlimited && (dimset->dimsyms[nextunlimited]->dim.isunlimited))); /* build a sub odometer */ slabodom = newsubodometer(odom,dimset,dimindex,nextunlimited); /* compute the starting offset in our datalist (Assumes that slabodom->index[i] == slabodom->start[i]) */ for(i=0;odometermore(slabodom);i++) { size_t offset = odometeroffset(slabodom); NCConstant* con = datalistith(list,offset); #ifdef USE_NOFILL if(nofill_flag && con == NULL) break; #endif if(con == NULL || con->nctype == NC_FILL) { if(filler == NULL) filler = getfiller(vsym); generate_arrayr(vsym,code,filler,odom,nextunlimited,NULL,generator); } else if(!islistconst(con)) semwarn(constline(con),"Expected {...} representing unlimited list"); else { Datalist* sublist = con->value.compoundv; generate_arrayr(vsym,code,sublist,odom,nextunlimited,filler,generator); } odometerincr(slabodom); } odometerfree(slabodom); } return; }
/* Generate type definitions */ static void genbin_deftype(Symbol* tsym) { int i,stat; ASSERT(tsym->objectclass == NC_TYPE); switch (tsym->subclass) { case NC_PRIM: break; /* these are already taken care of*/ case NC_OPAQUE: stat = nc_def_opaque(tsym->container->ncid, tsym->typ.size, tsym->name, &tsym->ncid); check_err(stat,__LINE__,__FILE__); break; case NC_ENUM: { Bytebuffer* datum; Datalist* ecdl; stat = nc_def_enum(tsym->container->ncid, tsym->typ.basetype->typ.typecode, tsym->name, &tsym->ncid); check_err(stat,__LINE__,__FILE__); datum = bbNew(); ecdl = builddatalist(1); dlextend(ecdl); /* make room for one constant*/ ecdl->length = 1; for(i=0;i<listlength(tsym->subnodes);i++) { Symbol* econst = (Symbol*)listget(tsym->subnodes,i); ASSERT(econst->subclass == NC_ECONST); generator_reset(bin_generator,NULL); bbClear(datum); generate_basetype(econst->typ.basetype,&econst->typ.econst,datum,NULL,bin_generator); stat = nc_insert_enum(tsym->container->ncid, tsym->ncid, econst->name, bbContents(datum)); check_err(stat,__LINE__,__FILE__); } bbFree(datum); dlfree(&ecdl); } break; case NC_VLEN: stat = nc_def_vlen(tsym->container->ncid, tsym->name, tsym->typ.basetype->ncid, &tsym->ncid); check_err(stat,__LINE__,__FILE__); break; case NC_COMPOUND: stat = nc_def_compound(tsym->container->ncid, tsym->typ.size, tsym->name, &tsym->ncid); check_err(stat,__LINE__,__FILE__); for(i=0;i<listlength(tsym->subnodes);i++) { Symbol* efield = (Symbol*)listget(tsym->subnodes,i); ASSERT(efield->subclass == NC_FIELD); if(efield->typ.dimset.ndims == 0){ stat = nc_insert_compound( tsym->container->ncid, tsym->ncid, efield->name, efield->typ.offset, efield->typ.basetype->ncid); } else { int j; int dimsizes[NC_MAX_VAR_DIMS]; /* Generate the field dimension constants*/ for(j=0;j<efield->typ.dimset.ndims;j++) { unsigned int size = efield->typ.dimset.dimsyms[j]->dim.declsize; dimsizes[j] = size; } stat = nc_insert_array_compound( tsym->container->ncid, tsym->ncid, efield->name, efield->typ.offset, efield->typ.basetype->ncid, efield->typ.dimset.ndims, dimsizes); } check_err(stat,__LINE__,__FILE__); } break; default: panic("definectype: unexpected type subclass"); } }
/** The basic idea is to split the set of dimensions into groups and iterate over each group. A group is defined as the range of indices starting at an unlimited dimension upto (but not including) the next unlimited. The first group starts at index 0, even if dimension 0 is not unlimited. The last group is everything from the last unlimited dimension thru the last dimension (index rank-1). */ static void generate_arrayr(Symbol* vsym, Bytebuffer* code, Datalist* list, Odometer* odom, int dimindex, Datalist* filler, Generator* generator ) { int uid,i; Symbol* basetype = vsym->typ.basetype; Dimset* dimset = &vsym->typ.dimset; int rank = dimset->ndims; int lastunlimited = findlastunlimited(dimset); int nextunlimited = findunlimited(dimset,dimindex+1); int typecode = basetype->typ.typecode; int islastgroup = (lastunlimited == rank || dimindex >= lastunlimited || dimindex == rank-1); Odometer* subodom = NULL; ASSERT(rank > 0); ASSERT((dimindex >= 0 && dimindex < rank)); if(islastgroup) { /* Handle NC_CHAR case separately */ if(typecode == NC_CHAR) { Bytebuffer* charbuf = bbNew(); gen_chararray(dimset,dimindex,list,charbuf,filler); generator->charconstant(generator,code,charbuf); bbFree(charbuf); } else { /* build a special odometer to walk the last few dimensions */ subodom = newsubodometer(odom,dimset,dimindex,rank); generator->listbegin(generator,LISTDATA,list->length,code,&uid); for(i=0;odometermore(subodom);i++) { size_t offset = odometeroffset(subodom); NCConstant* con = datalistith(list,offset); generator->list(generator,LISTDATA,uid,i,code); generate_basetype(basetype,con,code,filler,generator); odometerincr(subodom); } generator->listend(generator,LISTDATA,uid,i,code); odometerfree(subodom); subodom = NULL; } } else {/* !islastgroup */ /* Our datalist must be a list of compounds representing the next unlimited; so walk the subarray from this index upto next unlimited. */ ASSERT((dimindex < nextunlimited)); ASSERT((isunlimited(dimset,nextunlimited))); /* build a sub odometer */ subodom = newsubodometer(odom,dimset,dimindex,nextunlimited); for(i=0;odometermore(subodom);i++) { size_t offset = odometeroffset(subodom); NCConstant* con = datalistith(list,offset); if(con == NULL || con->nctype == NC_FILL) { if(filler == NULL) filler = getfiller(vsym); generate_arrayr(vsym,code,filler,odom,nextunlimited,NULL,generator); } else if(islistconst(con)) { Datalist* sublist = compoundfor(con); generate_arrayr(vsym,code,sublist,odom,nextunlimited,filler,generator); } else { semerror(constline(con),"Expected {...} representing unlimited list"); return; } odometerincr(subodom); } odometerfree(subodom); subodom = NULL; } if(subodom != NULL) odometerfree(subodom); return; }
static void generate_array(Symbol* vsym, Bytebuffer* code, Datalist* filler, Generator* generator, Writer writer ) { Dimset* dimset = &vsym->typ.dimset; int rank = dimset->ndims; Symbol* basetype = vsym->typ.basetype; nc_type typecode = basetype->typ.typecode; Odometer* odom = NULL; nciter_t iter; int firstunlim = findunlimited(dimset,1); int nunlim = countunlimited(dimset); int isnc3unlim = (nunlim <= 1 && (firstunlim == 0 || firstunlim == rank)); /* netcdf-3 case of at most 1 unlim in 0th dimension */ ASSERT(rank > 0); if(isnc3unlim) { /* Handle NC_CHAR case separately */ if(typecode == NC_CHAR) { Bytebuffer* charbuf = bbNew(); gen_chararray(dimset,0,vsym->data,charbuf,filler); generator->charconstant(generator,code,charbuf); /* Create an odometer to get the dimension info */ odom = newodometer(dimset,NULL,NULL); writer(generator,vsym,code,odom->rank,odom->start,odom->count); // writer(generator,vsym,code,odom->rank,0,bbLength(charbuf)); bbFree(charbuf); } else { /* typecode != NC_CHAR */ /* Case: dim 1..rank-1 are not unlimited, dim 0 might be */ size_t offset = 0; /* where are we in the data list */ size_t nelems = 0; /* # of data list items to generate */ /* Create an iterator and odometer and just walk the datalist */ nc_get_iter(vsym,nciterbuffersize,&iter); odom = newodometer(dimset,NULL,NULL); for(;;offset+=nelems) { int i,uid; nelems=nc_next_iter(&iter,odometerstartvector(odom),odometercountvector(odom)); if(nelems == 0) break; bbClear(code); generator->listbegin(generator,LISTDATA,vsym->data->length,code,&uid); for(i=0;i<nelems;i++) { NCConstant* con = datalistith(vsym->data,i+offset); generator->list(generator,LISTDATA,uid,i,code); generate_basetype(basetype,con,code,filler,generator); } generator->listend(generator,LISTDATA,uid,i,code); writer(generator,vsym,code,rank,odom->start,odom->count); } } } else { /* Hard case: multiple unlimited dimensions or unlim in dim > 0*/ /* Setup iterator and odometer */ nc_get_iter(vsym,NC_MAX_UINT,&iter); /* effectively infinite */ odom = newodometer(dimset,NULL,NULL); for(;;) {/* iterate in nelem chunks */ /* get nelems count and modify odometer */ size_t nelems=nc_next_iter(&iter,odom->start,odom->count); if(nelems == 0) break; generate_arrayr(vsym,code,vsym->data, odom, /*dim index=*/0, filler,generator ); writer(generator,vsym,code,odom->rank,odom->start,odom->count); } } if(odom != NULL) odometerfree(odom); }