void cytosineGuanine()
{
float hex1[6][2], hex2[6][2];
float rx=512;
//radius and color declarations
GLubyte red[] = {15, 231, 76, 60}; //oxygen
GLubyte green[] = {20, 39, 174, 96}; //carbon
GLubyte blue[] = {20, 52, 152, 219}; //nitrogen
GLubyte yellow[] = {10, 241, 196, 15}; //hydrogen
getHexagonPoints(hex1, -192, 350, 75);
getHexagonPoints(hex2, 192, 350, 75);
glPushMatrix();
glTranslatef(rx, 0, 0);
glRotatef(theta, 0.0, 1.0, 0.0);
//hexagon 1
drawAtom(hex1[0][0], hex1[0][1], 0, green);
drawAtom(hex1[1][0], hex1[1][1], 0, blue);
drawAtom(hex1[2][0], hex1[2][1], 0, green);
drawAtom(hex1[3][0], hex1[3][1], 0, green);
drawAtom(hex1[4][0], hex1[4][1], 0, green);
drawAtom(hex1[5][0], hex1[5][1], 0, blue);
drawBondLine(hex1[0][0],hex1[0][1],0, hex1[1][0],hex1[1][1],0);
drawBondLine(hex1[1][0],hex1[1][1],0, hex1[2][0],hex1[2][1],0);
drawBondLine(hex1[2][0],hex1[2][1],0, hex1[3][0],hex1[3][1],0);
drawBondLine(hex1[3][0],hex1[3][1],0, hex1[4][0],hex1[4][1],0);
drawBondLine(hex1[4][0],hex1[4][1],0, hex1[5][0],hex1[5][1],0);
drawBondLine(hex1[5][0],hex1[5][1],0, hex1[0][0],hex1[0][1],0);
drawAtom(hex1[0][0], hex1[0][1]-50, 0, red);
drawBondLine(hex1[0][0],hex1[0][1],0, hex1[0][0],hex1[0][1]-50,0);
drawAtom(hex1[2][0]+50, hex1[2][1]+25, -50, blue);
drawBondLine(hex1[2][0],hex1[2][1],0, hex1[2][0]+50,hex1[2][1]+25,-50);
drawAtom(hex1[2][0]+50,hex1[2][1]+67.5, -50, yellow);
drawBondLine(hex1[2][0]+50,hex1[2][1]+25,-50, hex1[2][0]+50,hex1[2][1]+67.5,-50);
drawAtom(hex1[2][0]+85,hex1[2][1],-50, yellow);
drawBondLine(hex1[2][0]+50,hex1[2][1]+25,-50, hex1[2][0]+85,hex1[2][1],-50);
drawAtom(hex1[3][0],hex1[3][1]+25, -50, yellow);
drawBondLine(hex1[3][0],hex1[3][1],0, hex1[3][0],hex1[3][1]+25,-50);
drawAtom(hex1[4][0]-15,hex1[4][1]+15, 50, yellow);
drawBondLine(hex1[4][0],hex1[4][1],0, hex1[4][0]-15,hex1[4][1]+15,50);
//hexagon 2
drawAtom(hex2[0][0], hex2[0][1], 0, blue);
drawAtom(hex2[1][0], hex2[1][1], 0, green);
drawAtom(hex2[2][0], hex2[2][1], 0, green);
drawAtom(hex2[3][0], hex2[3][1], 0, green);
drawAtom(hex2[4][0], hex2[4][1], 0, blue);
drawAtom(hex2[5][0], hex2[5][1], 0, green);
drawBondLine(hex2[0][0],hex2[0][1],0, hex2[1][0],hex2[1][1],0);
drawBondLine(hex2[1][0],hex2[1][1],0, hex2[2][0],hex2[2][1],0);
drawBondLine(hex2[2][0],hex2[2][1],0, hex2[3][0],hex2[3][1],0);
drawBondLine(hex2[3][0],hex2[3][1],0, hex2[4][0],hex2[4][1],0);
drawBondLine(hex2[4][0],hex2[4][1],0, hex2[5][0],hex2[5][1],0);
drawBondLine(hex2[5][0],hex2[5][1],0, hex2[0][0],hex2[0][1],0);
drawAtom(hex2[1][0]+50, hex2[0][1]+25, 50, blue);
drawBondLine(hex2[1][0],hex2[1][1],0, hex2[1][0]+50,hex2[0][1]+25,50);
drawAtom(hex2[2][0]+50, hex2[3][1]-25, 50, blue);
drawBondLine(hex2[2][0],hex2[2][1],0, hex2[2][0]+50,hex2[3][1]-25,50);
drawAtom(hex2[2][0]+100,hex2[2][1]-37.5,75, green);
drawBondLine(hex2[1][0]+50, hex2[0][1]+25, 50, hex2[2][0]+100,hex2[2][1]-37.5,75);
drawBondLine(hex2[2][0]+50, hex2[3][1]-25, 50, hex2[2][0]+100,hex2[2][1]-37.5,75);
drawAtom(hex2[2][0]+142.5,hex2[2][1]-37.5,75, yellow);
drawBondLine(hex2[2][0]+100,hex2[2][1]-37.5,75, hex2[2][0]+142.5,hex2[2][1]-37.5,75);
drawAtom(hex2[3][0], hex2[3][1]+50, 0, red);
drawBondLine(hex2[3][0],hex2[3][1],0, hex2[3][0],hex2[3][1]+50,0);
drawAtom(hex2[4][0]-25, hex2[4][1]+25, 0, yellow);
drawBondLine(hex2[4][0],hex2[4][1],0, hex2[4][0]-25,hex2[4][1]+25,0);
drawAtom(hex2[5][0]-50, hex2[0][1]+25, 50, blue);
drawBondLine(hex2[5][0],hex2[5][1],0, hex2[5][0]-50,hex2[0][1]+25,50);
drawAtom(hex2[5][0]-50, hex2[0][1]-15, 50, yellow);
drawBondLine(hex2[5][0]-50,hex2[0][1]+25,50, hex2[5][0]-50,hex2[0][1]-15,50);
drawAtom(hex2[5][0]-85, hex2[0][1]+60, 50, yellow);
drawBondLine(hex2[5][0]-50,hex2[0][1]+25,50, hex2[5][0]-85,hex2[0][1]+60,50);
//H-bonds
glLineWidth(1.5);
glBegin(GL_LINES);
glVertex3f(hex1[0][0],hex1[0][1]-50,0);
glVertex3f(hex2[5][0]-85,hex2[0][1]+60,50);
glVertex3f(hex1[1][0],hex1[1][1],0);
glVertex3f(hex2[4][0]-25,hex2[4][1]+25,0);
glVertex3f(hex1[2][0]+85,hex1[2][1],-50);
glVertex3f(hex2[3][0],hex2[3][1]+50,0);
glEnd();
glTranslatef(-rx, 0, 0);
glPopMatrix();
theta+=0.25;
drawLegend();
glColor3ub(52, 73, 94);
output(300, 190, "Cytosine recognizes specific DNA sequences and catalyzes", fonts[2]);
output(300, 170, "the transfer of a methyl group.", fonts[2]);
output(300, 130, "Guanine can carry energy and if bound to special receptors,", fonts[2]);
output(300, 110, "can help carry signals from one part of the cell to another.", fonts[2]);
}
PointCloudPtr ContourGenerator::M30_H()
{
return getContour(getHexagonPoints(0.02875));
}
void adenineThymine()
{
float hex1[6][2], hex2[6][2];
float rx=512;
//radius and colors declarations
GLubyte red[] = {15, 231, 76, 60}; //oxygen
GLubyte green[] = {20, 39, 174, 96}; //carbon
GLubyte blue[] = {20, 52, 152, 219}; //nitrogen
GLubyte yellow[] = {10, 241, 196, 15}; //hydrogen
getHexagonPoints(hex1, -128, 350, 75);
getHexagonPoints(hex2, 128, 350, 75);
glPushMatrix();
glTranslatef(rx, 0, 0);
glRotatef(theta, 0.0, 1.0, 0.0);
//hexagon 1
drawAtom(hex1[0][0], hex1[0][1], 0, green);
drawAtom(hex1[1][0], hex1[1][1], 0, blue);
drawAtom(hex1[2][0], hex1[2][1], 0, green);
drawAtom(hex1[3][0], hex1[3][1], 0, green);
drawAtom(hex1[4][0], hex1[4][1], 0, green);
drawAtom(hex1[5][0], hex1[5][1], 0, blue);
drawBondLine(hex1[0][0],hex1[0][1],0, hex1[1][0],hex1[1][1],0);
drawBondLine(hex1[1][0],hex1[1][1],0, hex1[2][0],hex1[2][1],0);
drawBondLine(hex1[2][0],hex1[2][1],0, hex1[3][0],hex1[3][1],0);
drawBondLine(hex1[3][0],hex1[3][1],0, hex1[4][0],hex1[4][1],0);
drawBondLine(hex1[4][0],hex1[4][1],0, hex1[5][0],hex1[5][1],0);
drawBondLine(hex1[5][0],hex1[5][1],0, hex1[0][0],hex1[0][1],0);
drawAtom(hex1[0][0], hex1[0][1]-50, 0, red);
drawBondLine(hex1[0][0],hex1[0][1],0, hex1[0][0],hex1[0][1]-50,0);
drawAtom(hex1[1][0]+15, hex1[1][1]-15, -50, yellow);
drawBondLine(hex1[1][0],hex1[1][1],0, hex1[1][0]+15,hex1[1][1]-15,-50);
drawAtom(hex1[2][0]+40, hex1[2][1]+40, 0, red);
drawBondLine(hex1[2][0],hex1[2][1],0, hex1[2][0]+40,hex1[2][1]+40,0);
drawAtom(hex1[3][0], hex1[3][1]+50, 0, green);
drawBondLine(hex1[3][0],hex1[3][1],0, hex1[3][0],hex1[3][1]+50,0);
drawAtom(hex1[3][0], hex1[3][1]+75, 50, yellow);
drawBondLine(hex1[3][0],hex1[3][1]+50,0, hex1[3][0],hex1[3][1]+75,50);
drawAtom(hex1[3][0]+35, hex1[3][1]+75, -35, yellow);
drawBondLine(hex1[3][0],hex1[3][1]+50,0, hex1[3][0]+35,hex1[3][1]+75,-35);
drawAtom(hex1[3][0]-35, hex1[3][1]+75, -35, yellow);
drawBondLine(hex1[3][0],hex1[3][1]+50,0, hex1[3][0]-35,hex1[3][1]+75,-35);
drawAtom(hex1[4][0]-15,hex1[4][1]+15, 50, yellow);
drawBondLine(hex1[4][0],hex1[4][1],0, hex1[4][0]-15,hex1[4][1]+15,50);
//hexagon 2
drawAtom(hex2[0][0], hex2[0][1], 0, blue);
drawAtom(hex2[1][0], hex2[1][1], 0, green);
drawAtom(hex2[2][0], hex2[2][1], 0, green);
drawAtom(hex2[3][0], hex2[3][1], 0, green);
drawAtom(hex2[4][0], hex2[4][1], 0, blue);
drawAtom(hex2[5][0], hex2[5][1], 0, green);
drawBondLine(hex2[0][0],hex2[0][1],0, hex2[1][0],hex2[1][1],0);
drawBondLine(hex2[1][0],hex2[1][1],0, hex2[2][0],hex2[2][1],0);
drawBondLine(hex2[2][0],hex2[2][1],0, hex2[3][0],hex2[3][1],0);
drawBondLine(hex2[3][0],hex2[3][1],0, hex2[4][0],hex2[4][1],0);
drawBondLine(hex2[4][0],hex2[4][1],0, hex2[5][0],hex2[5][1],0);
drawBondLine(hex2[5][0],hex2[5][1],0, hex2[0][0],hex2[0][1],0);
drawAtom(hex2[1][0]+50, hex2[0][1]+25, 50, blue);
drawBondLine(hex2[1][0],hex2[1][1],0, hex2[1][0]+50,hex2[0][1]+25,50);
drawAtom(hex2[2][0]+50, hex2[3][1]-25, 50, blue);
drawBondLine(hex2[2][0],hex2[2][1],0, hex2[2][0]+50,hex2[3][1]-25,50);
drawAtom(hex2[2][0]+100,hex2[2][1]-37.5,75, green);
drawBondLine(hex2[1][0]+50, hex2[0][1]+25, 50, hex2[2][0]+100,hex2[2][1]-37.5,75);
drawBondLine(hex2[2][0]+50, hex2[3][1]-25, 50, hex2[2][0]+100,hex2[2][1]-37.5,75);
drawAtom(hex2[2][0]+142.5,hex2[2][1]-37.5,75, yellow);
drawBondLine(hex2[2][0]+100,hex2[2][1]-37.5,75, hex2[2][0]+142.5,hex2[2][1]-37.5,75);
drawAtom(hex2[3][0], hex2[3][1]+50, 0, blue);
drawBondLine(hex2[3][0],hex2[3][1],0, hex2[3][0],hex2[3][1]+50,0);
drawAtom(hex2[3][0], hex2[3][1]+75, 50, yellow);
drawBondLine(hex2[3][0], hex2[3][1]+50,0, hex2[3][0],hex2[3][1]+75,50);
drawAtom(hex2[3][0], hex2[3][1]+75, -50, yellow);
drawBondLine(hex2[3][0],hex2[3][1]+50,0, hex2[3][0],hex2[3][1]+75,-50);
drawAtom(hex2[5][0]-30,hex2[5][1]-30, 0, yellow);
drawBondLine(hex2[5][0],hex2[5][1],0, hex2[5][0]-30,hex2[5][1]-30,0);
//H-bonds
glLineWidth(1.5);
glBegin(GL_LINES);
glVertex3f(hex1[2][0]+40,hex1[2][1]+40,0);
glVertex3f(hex2[3][0], hex2[3][1]+75, 50);
glVertex3f(hex1[1][0]+15, hex1[1][1]-15, -50);
glVertex3f(hex2[4][0],hex2[4][1],0);
glEnd();
glTranslatef(-rx, 0, 0);
glPopMatrix();
theta+=0.25;
drawLegend();
glColor3ub(52, 73, 94);
output(300, 190, "Adenine is a nucleobase which plays a major role in", fonts[2]);
output(300, 170, "cellular respiration and is rich in adenosine.", fonts[2]);
output(300, 130, "Thymine is a pyrimidine nucleobase and it", fonts[2]);
output(300, 110, "assists in stabalizing the nucleic acid structures.", fonts[2]);
}
