Example #1
0
/** Optimized implementation of the ARMCI IOV operation that uses a single
  * lock/unlock pair.
  */
int ARMCII_Iov_op_batched(enum ARMCII_Op_e op, void **src, void **dst, int count, int elem_count,
    MPI_Datatype type, int proc) {

  int i;
  gmr_t *mreg;
  void *shr_ptr;

  switch(op) {
    case ARMCII_OP_PUT:
      shr_ptr = dst[0];
      break;
    case ARMCII_OP_GET:
      shr_ptr = src[0];
      break;
    case ARMCII_OP_ACC:
      shr_ptr = dst[0];
      break;
    default:
      ARMCII_Error("unknown operation (%d)", op);
      return 1;
  }

  mreg = gmr_lookup(shr_ptr, proc);
  ARMCII_Assert_msg(mreg != NULL, "Invalid remote pointer");

  gmr_lock(mreg, proc);

  for (i = 0; i < count; i++) {

    if (   ARMCII_GLOBAL_STATE.iov_batched_limit > 0 
        && i % ARMCII_GLOBAL_STATE.iov_batched_limit == 0
        && i > 0 )
    {
      gmr_unlock(mreg, proc);
      gmr_lock(mreg, proc);
    }

    switch(op) {
      case ARMCII_OP_PUT:
        gmr_put(mreg, src[i], dst[i], elem_count, proc);
        break;
      case ARMCII_OP_GET:
        gmr_get(mreg, src[i], dst[i], elem_count, proc);
        break;
      case ARMCII_OP_ACC:
        gmr_accumulate(mreg, src[i], dst[i], elem_count, type, proc);
        break;
      default:
        ARMCII_Error("unknown operation (%d)", op);
        return 1;
    }
  }

  gmr_unlock(mreg, proc);

  return 0;
}
Example #2
0
/** One-sided put operation.
  *
  * @param[in] src    Source address (remote)
  * @param[in] dst    Destination address (local)
  * @param[in] size   Number of bytes to transfer
  * @param[in] target Process id to target
  * @return           0 on success, non-zero on failure
  */
int ARMCI_Put(void *src, void *dst, int size, int target) {
  gmr_t *src_mreg, *dst_mreg;

  src_mreg = gmr_lookup(src, ARMCI_GROUP_WORLD.rank);
  dst_mreg = gmr_lookup(dst, target);

  ARMCII_Assert_msg(dst_mreg != NULL, "Invalid remote pointer");

  /* Local operation */
  if (target == ARMCI_GROUP_WORLD.rank) {
    if (ARMCII_GLOBAL_STATE.shr_buf_method != ARMCII_SHR_BUF_NOGUARD) {
      gmr_dla_lock(dst_mreg);
      if (src_mreg) gmr_dla_lock(src_mreg);
    }

    ARMCI_Copy(src, dst, size);
    
    if (ARMCII_GLOBAL_STATE.shr_buf_method != ARMCII_SHR_BUF_NOGUARD) {
      gmr_dla_unlock(dst_mreg);
      if (src_mreg) gmr_dla_unlock(src_mreg);
    }
  }

  /* Origin buffer is private */
  else if (src_mreg == NULL || ARMCII_GLOBAL_STATE.shr_buf_method == ARMCII_SHR_BUF_NOGUARD) {
    gmr_lock(dst_mreg, target);
    gmr_put(dst_mreg, src, dst, size, target);
    gmr_unlock(dst_mreg, target);
  }

  /* COPY: Either origin and target buffers are in the same window and we can't
   * lock the same window twice (MPI semantics) or the user has requested
   * always-copy mode. */
  else {
    void *src_buf;

    MPI_Alloc_mem(size, MPI_INFO_NULL, &src_buf);
    ARMCII_Assert(src_buf != NULL);

    gmr_dla_lock(src_mreg);
    ARMCI_Copy(src, src_buf, size);
    gmr_dla_unlock(src_mreg);

    gmr_lock(dst_mreg, target);
    gmr_put(dst_mreg, src_buf, dst, size, target);
    gmr_unlock(dst_mreg, target);

    MPI_Free_mem(src_buf);
  }

  return 0;
}
Example #3
0
/** Blocking operation that accumulates data from the local process into the
  * memory of the remote process.  The data transfer is strided and blocking.
  *
  * @param[in] datatype        Type of data to be transferred.
  * @param[in] scale           Pointer to the value that input data should be scaled by.
  * @param[in] src_ptr         Source starting address of the data block to put.
  * @param[in] src_stride_arr  Source array of stride distances in bytes.
  * @param[in] dst_ptr         Destination starting address to put data.
  * @param[in] dst_stride_ar   Destination array of stride distances in bytes.
  * @param[in] count           Block size in each dimension. count[0] should be the
  *                            number of bytes of contiguous data in leading dimension.
  * @param[in] stride_levels   The level of strides.
  * @param[in] proc            Remote process ID (destination).
  *
  * @return                    Zero on success, error code otherwise.
  */
int PARMCI_AccS(int datatype, void *scale,
               void *src_ptr, int src_stride_ar[/*stride_levels*/],
               void *dst_ptr, int dst_stride_ar[/*stride_levels*/],
               int count[/*stride_levels+1*/], int stride_levels, int proc) {

  int err;

  if (ARMCII_GLOBAL_STATE.strided_method == ARMCII_STRIDED_DIRECT) {
    void         *src_buf = NULL;
    gmr_t *mreg, *gmr_loc = NULL;
    MPI_Datatype src_type, dst_type, mpi_datatype;
    int          scaled, mpi_datatype_size;

    ARMCII_Acc_type_translate(datatype, &mpi_datatype, &mpi_datatype_size);
    scaled = ARMCII_Buf_acc_is_scaled(datatype, scale);

    /* SCALE: copy and scale if requested */
    if (scaled) {
      armci_giov_t iov;
      int i, nelem;

      if (ARMCII_GLOBAL_STATE.shr_buf_method != ARMCII_SHR_BUF_NOGUARD)
        gmr_loc = gmr_lookup(src_ptr, ARMCI_GROUP_WORLD.rank);

      for (i = 1, nelem = count[0]/mpi_datatype_size; i < stride_levels+1; i++)
        nelem *= count[i];

      MPI_Alloc_mem(nelem*mpi_datatype_size, MPI_INFO_NULL, &src_buf);
      ARMCII_Assert(src_buf != NULL);

      if (gmr_loc != NULL) gmr_dla_lock(gmr_loc);

      /* Shoehorn the strided information into an IOV */
      ARMCII_Strided_to_iov(&iov, src_ptr, src_stride_ar, src_ptr, src_stride_ar, count, stride_levels);

      for (i = 0; i < iov.ptr_array_len; i++)
        ARMCII_Buf_acc_scale(iov.src_ptr_array[i], ((uint8_t*)src_buf) + i*iov.bytes, iov.bytes, datatype, scale);

      free(iov.src_ptr_array);
      free(iov.dst_ptr_array);

      if (gmr_loc != NULL) gmr_dla_unlock(gmr_loc);

      MPI_Type_contiguous(nelem, mpi_datatype, &src_type);
    }

    /* COPY: Guard shared buffers */
    else if (ARMCII_GLOBAL_STATE.shr_buf_method == ARMCII_SHR_BUF_COPY) {
      gmr_loc = gmr_lookup(src_ptr, ARMCI_GROUP_WORLD.rank);

      if (gmr_loc != NULL) {
        int i, nelem;

        for (i = 1, nelem = count[0]/mpi_datatype_size; i < stride_levels+1; i++)
          nelem *= count[i];

        MPI_Alloc_mem(nelem*mpi_datatype_size, MPI_INFO_NULL, &src_buf);
        ARMCII_Assert(src_buf != NULL);

        gmr_dla_lock(gmr_loc);
        armci_write_strided(src_ptr, stride_levels, src_stride_ar, count, src_buf);
        gmr_dla_unlock(gmr_loc);

        MPI_Type_contiguous(nelem, mpi_datatype, &src_type);
      }
    }

    /* NOGUARD: If src_buf hasn't been assigned to a copy, the strided source
     * buffer is going to be used directly. */
    if (src_buf == NULL) { 
        src_buf = src_ptr;
        ARMCII_Strided_to_dtype(src_stride_ar, count, stride_levels, mpi_datatype, &src_type);
    }

    ARMCII_Strided_to_dtype(dst_stride_ar, count, stride_levels, mpi_datatype, &dst_type);

    MPI_Type_commit(&src_type);
    MPI_Type_commit(&dst_type);

    int src_size, dst_size;

    MPI_Type_size(src_type, &src_size);
    MPI_Type_size(dst_type, &dst_size);

    ARMCII_Assert(src_size == dst_size);

    mreg = gmr_lookup(dst_ptr, proc);
    ARMCII_Assert_msg(mreg != NULL, "Invalid shared pointer");

    gmr_lock(mreg, proc);
    gmr_accumulate_typed(mreg, src_buf, 1, src_type, dst_ptr, 1, dst_type, proc);
    gmr_unlock(mreg, proc);

    MPI_Type_free(&src_type);
    MPI_Type_free(&dst_type);

    /* COPY/SCALE: Free temp buffer */
    if (src_buf != src_ptr)
      MPI_Free_mem(src_buf);

    err = 0;

  } else {
    armci_giov_t iov;

    ARMCII_Strided_to_iov(&iov, src_ptr, src_stride_ar, dst_ptr, dst_stride_ar, count, stride_levels);
    err = PARMCI_AccV(datatype, scale, &iov, 1, proc);

    free(iov.src_ptr_array);
    free(iov.dst_ptr_array);
  }

  return err;
}
Example #4
0
/** Blocking operation that transfers data from the remote process to the
  * memory of the calling process.  The data transfer is strided and blocking.
  *
  * @param[in] src_ptr         Source starting address of the data block to put.
  * @param[in] src_stride_arr  Source array of stride distances in bytes.
  * @param[in] dst_ptr         Destination starting address to put data.
  * @param[in] dst_stride_ar   Destination array of stride distances in bytes.
  * @param[in] count           Block size in each dimension. count[0] should be the
  *                            number of bytes of contiguous data in leading dimension.
  * @param[in] stride_levels   The level of strides.
  * @param[in] proc            Remote process ID (destination).
  *
  * @return                    Zero on success, error code otherwise.
  */
int PARMCI_GetS(void *src_ptr, int src_stride_ar[/*stride_levels*/],
               void *dst_ptr, int dst_stride_ar[/*stride_levels*/], 
               int count[/*stride_levels+1*/], int stride_levels, int proc) {

  int err;

  if (ARMCII_GLOBAL_STATE.strided_method == ARMCII_STRIDED_DIRECT) {
    void         *dst_buf = NULL;
    gmr_t *mreg, *gmr_loc = NULL;
    MPI_Datatype src_type, dst_type;

    /* COPY: Guard shared buffers */
    if (ARMCII_GLOBAL_STATE.shr_buf_method == ARMCII_SHR_BUF_COPY) {
      gmr_loc = gmr_lookup(dst_ptr, ARMCI_GROUP_WORLD.rank);

      if (gmr_loc != NULL) {
        int i, size;

        for (i = 1, size = count[0]; i < stride_levels+1; i++)
          size *= count[i];

        MPI_Alloc_mem(size, MPI_INFO_NULL, &dst_buf);
        ARMCII_Assert(dst_buf != NULL);

        MPI_Type_contiguous(size, MPI_BYTE, &dst_type);
      }
    }

    /* NOGUARD: If dst_buf hasn't been assigned to a copy, the strided source
     * buffer is going to be used directly. */
    if (dst_buf == NULL) { 
        dst_buf = dst_ptr;
        ARMCII_Strided_to_dtype(dst_stride_ar, count, stride_levels, MPI_BYTE, &dst_type);
    }

    ARMCII_Strided_to_dtype(src_stride_ar, count, stride_levels, MPI_BYTE, &src_type);

    MPI_Type_commit(&src_type);
    MPI_Type_commit(&dst_type);

    mreg = gmr_lookup(src_ptr, proc);
    ARMCII_Assert_msg(mreg != NULL, "Invalid shared pointer");

    gmr_lock(mreg, proc);
    gmr_get_typed(mreg, src_ptr, 1, src_type, dst_buf, 1, dst_type, proc);
    gmr_unlock(mreg, proc);

    /* COPY: Finish the transfer */
    if (dst_buf != dst_ptr) {
      gmr_dla_lock(gmr_loc);
      armci_read_strided(dst_ptr, stride_levels, dst_stride_ar, count, dst_buf);
      gmr_dla_unlock(gmr_loc);
      MPI_Free_mem(dst_buf);
    }

    MPI_Type_free(&src_type);
    MPI_Type_free(&dst_type);

    err = 0;

  } else {
    armci_giov_t iov;

    ARMCII_Strided_to_iov(&iov, src_ptr, src_stride_ar, dst_ptr, dst_stride_ar, count, stride_levels);
    err = PARMCI_GetV(&iov, 1, proc);

    free(iov.src_ptr_array);
    free(iov.dst_ptr_array);
  }

  return err;
}
Example #5
0
/** Optimized implementation of the ARMCI IOV operation that uses an MPI
  * datatype to achieve a one-sided gather/scatter.  Does not use MPI_BOTTOM.
  */
int ARMCII_Iov_op_datatype_no_bottom(enum ARMCII_Op_e op, void **src, void **dst, int count, int elem_count,
    MPI_Datatype type, int proc) {

    gmr_t *mreg;
    MPI_Datatype  type_loc, type_rem;
    MPI_Aint      disp_loc[count];
    int           disp_rem[count];
    int           block_len[count];
    void         *dst_win_base;
    int           dst_win_size, i, type_size;
    void        **buf_rem, **buf_loc;
    MPI_Aint      base_rem;
    MPI_Aint      base_loc;
    void         *base_loc_ptr;

    switch(op) {
      case ARMCII_OP_ACC:
      case ARMCII_OP_PUT:
        buf_rem = dst;
        buf_loc = src;
        break;
      case ARMCII_OP_GET:
        buf_rem = src;
        buf_loc = dst;
        break;
      default:
        ARMCII_Error("unknown operation (%d)", op);
        return 1;
    }

    MPI_Type_size(type, &type_size);

    mreg = gmr_lookup(buf_rem[0], proc);
    ARMCII_Assert_msg(mreg != NULL, "Invalid remote pointer");

    dst_win_base = mreg->slices[proc].base;
    dst_win_size = mreg->slices[proc].size;

    MPI_Get_address(dst_win_base, &base_rem);

    /* Pick a base address for the start of the origin's datatype */
    base_loc_ptr = buf_loc[0];
    MPI_Get_address(base_loc_ptr, &base_loc);

    for (i = 0; i < count; i++) {
      MPI_Aint target_rem, target_loc;
      MPI_Get_address(buf_loc[i], &target_loc);
      MPI_Get_address(buf_rem[i], &target_rem);
      disp_loc[i]  =  target_loc - base_loc;
      disp_rem[i]  = (target_rem - base_rem)/type_size;
      block_len[i] = elem_count;

      ARMCII_Assert_msg((target_rem - base_rem) % type_size == 0, "Transfer size is not a multiple of type size");
      ARMCII_Assert_msg(disp_rem[i] >= 0 && disp_rem[i] < dst_win_size, "Invalid remote pointer");
      ARMCII_Assert_msg(((uint8_t*)buf_rem[i]) + block_len[i] <= ((uint8_t*)dst_win_base) + dst_win_size, "Transfer exceeds buffer length");
    }

    MPI_Type_create_hindexed(count, block_len, disp_loc, type, &type_loc);
    MPI_Type_create_indexed_block(count, elem_count, disp_rem, type, &type_rem);
    //MPI_Type_indexed(count, block_len, disp_rem, type, &type_rem);

    MPI_Type_commit(&type_loc);
    MPI_Type_commit(&type_rem);

    gmr_lock(mreg, proc);

    switch(op) {
      case ARMCII_OP_ACC:
        gmr_accumulate_typed(mreg, base_loc_ptr, 1, type_loc, MPI_BOTTOM, 1, type_rem, proc);
        break;
      case ARMCII_OP_PUT:
        gmr_put_typed(mreg, base_loc_ptr, 1, type_loc, MPI_BOTTOM, 1, type_rem, proc);
        break;
      case ARMCII_OP_GET:
        gmr_get_typed(mreg, MPI_BOTTOM, 1, type_rem, base_loc_ptr, 1, type_loc, proc);
        break;
      default:
        ARMCII_Error("unknown operation (%d)", op);
        return 1;
    }

    gmr_unlock(mreg, proc);

    MPI_Type_free(&type_loc);
    MPI_Type_free(&type_rem);

    return 0;
}    
Example #6
0
/** One-sided accumulate operation.
  *
  * @param[in] datatype ARMCI data type for the accumulate operation (see armci.h)
  * @param[in] scale    Pointer for a scalar of type datatype that will be used to
  *                     scale values in the source buffer
  * @param[in] src      Source address (remote)
  * @param[in] dst      Destination address (local)
  * @param[in] bytes    Number of bytes to transfer
  * @param[in] proc     Process id to target
  * @return             0 on success, non-zero on failure
  */
int ARMCI_Acc(int datatype, void *scale, void *src, void *dst, int bytes, int proc) {
  void  *src_buf;
  int    count, type_size, scaled, src_is_locked = 0;
  MPI_Datatype type;
  gmr_t *src_mreg, *dst_mreg;

  src_mreg = gmr_lookup(src, ARMCI_GROUP_WORLD.rank);
  dst_mreg = gmr_lookup(dst, proc);

  ARMCII_Assert_msg(dst_mreg != NULL, "Invalid remote pointer");

  /* Prepare the input data: Apply scaling if needed and acquire the DLA lock if
   * needed.  We hold the DLA lock if (src_buf == src && src_mreg != NULL). */

  scaled = ARMCII_Buf_acc_is_scaled(datatype, scale);

  if (src_mreg && ARMCII_GLOBAL_STATE.shr_buf_method != ARMCII_SHR_BUF_NOGUARD) {
    gmr_dla_lock(src_mreg);
    src_is_locked = 1;
  }

  if (scaled) {
      MPI_Alloc_mem(bytes, MPI_INFO_NULL, &src_buf);
      ARMCII_Assert(src_buf != NULL);
      ARMCII_Buf_acc_scale(src, src_buf, bytes, datatype, scale);
  } else {
    src_buf = src;
  }

  /* Check if we need to copy: user requested it or same mem region */
  if (   (src_buf == src) /* buf_prepare didn't make a copy */
      && (ARMCII_GLOBAL_STATE.shr_buf_method == ARMCII_SHR_BUF_COPY || src_mreg == dst_mreg) )
  {
    MPI_Alloc_mem(bytes, MPI_INFO_NULL, &src_buf);
    ARMCII_Assert(src_buf != NULL);
    ARMCI_Copy(src, src_buf, bytes);
  }

  /* Unlock early if src_buf is a copy */
  if (src_buf != src && src_is_locked) {
    gmr_dla_unlock(src_mreg);
    src_is_locked = 0;
  }

  ARMCII_Acc_type_translate(datatype, &type, &type_size);
  count = bytes/type_size;

  ARMCII_Assert_msg(bytes % type_size == 0, 
      "Transfer size is not a multiple of the datatype size");

  /* TODO: Support a local accumulate operation more efficiently */

  gmr_lock(dst_mreg, proc);
  gmr_accumulate(dst_mreg, src_buf, dst, count, type, proc);
  gmr_unlock(dst_mreg, proc);

  if (src_is_locked) {
    gmr_dla_unlock(src_mreg);
    src_is_locked = 0;
  }

  if (src_buf != src)
    MPI_Free_mem(src_buf);

  return 0;
}