Example #1
0
/** Determine the number of threads for module \p mod.
 *
 *  \p m takes values form the module_nth_t enum and maps these to the
 *  corresponding value in modth_env_var.
 *
 *  Each number of threads per module takes the default value unless
 *  GMX_*_NUM_THERADS env var is set, case in which its value overrides
 *  the deafult.
 *
 *  The "group" scheme supports OpenMP only in PME and in thise case all but
 *  the PME nthread values default to 1.
 */
static void pick_module_nthreads(const gmx::MDLogger &mdlog, int m,
                                 gmx_bool bFullOmpSupport,
                                 gmx_bool bSepPME)
{
    char      *env;
    int        nth;

    const bool bOMP = GMX_OPENMP;

    /* The default should never be set through a GMX_*_NUM_THREADS env var
     * as it's always equal with gnth. */
    if (m == emntDefault)
    {
        return;
    }

    /* check the environment variable */
    if ((env = getenv(modth_env_var[m])) != nullptr)
    {
        sscanf(env, "%d", &nth);

        if (!bOMP)
        {
            gmx_warning("%s=%d is set, but %s is compiled without OpenMP!",
                        modth_env_var[m], nth,
                        gmx::getProgramContext().displayName());
        }

        /* with the verlet codepath, when any GMX_*_NUM_THREADS env var is set,
         * OMP_NUM_THREADS also has to be set */
        if (bFullOmpSupport && getenv("OMP_NUM_THREADS") == nullptr)
        {
            gmx_warning("%s=%d is set, the default number of threads also "
                        "needs to be set with OMP_NUM_THREADS!",
                        modth_env_var[m], nth);
        }

        /* with the group scheme warn if any env var except PME is set */
        if (!bFullOmpSupport)
        {
            if (m != emntPME)
            {
                gmx_warning("%s=%d is set, but OpenMP multithreading is not "
                            "supported in %s!",
                            modth_env_var[m], nth, mod_name[m]);
                nth = 1;
            }
        }

        /* only babble if we are really overriding with a different value */
        if ((bSepPME && m == emntPME && nth != modth.gnth_pme) || (nth != modth.gnth))
        {
            GMX_LOG(mdlog.warning).asParagraph().appendTextFormatted(
                    "%s=%d set, overriding the default number of %s threads",
                    modth_env_var[m], nth, mod_name[m]);
        }
    }
    else
    {
        /* pick the global PME node nthreads if we are setting the number
         * of threads in separate PME nodes  */
        nth = (bSepPME && m == emntPME) ? modth.gnth_pme : modth.gnth;
    }

    gmx_omp_nthreads_set(m, nth);
}
Example #2
0
/** Determine the number of threads for module \p mod.
 *
 *  \p m takes values form the module_nth_t enum and maps these to the
 *  corresponding value in modth_env_var.
 *
 *  Each number of threads per module takes the default value unless
 *  GMX_*_NUM_THERADS env var is set, case in which its value overrides
 *  the deafult.
 *
 *  The "group" scheme supports OpenMP only in PME and in thise case all but
 *  the PME nthread values default to 1.
 */
static void pick_module_nthreads(FILE *fplog, int m,
                                 gmx_bool bSimMaster,
                                 gmx_bool bFullOmpSupport,
                                 gmx_bool bSepPME)
{
    char    *env;
    int      nth;
    char     sbuf[STRLEN];
    gmx_bool bOMP;

#ifdef GMX_OPENMP
    bOMP = TRUE;
#else
    bOMP = FALSE;
#endif /* GMX_OPENMP */

    /* The default should never be set through a GMX_*_NUM_THREADS env var
     * as it's always equal with gnth. */
    if (m == emntDefault)
    {
        return;
    }

    /* check the environment variable */
    if ((env = getenv(modth_env_var[m])) != NULL)
    {
        sscanf(env, "%d", &nth);

        if (!bOMP)
        {
            gmx_warning("%s=%d is set, but %s is compiled without OpenMP!",
                        modth_env_var[m], nth, ShortProgram());
        }

        /* with the verlet codepath, when any GMX_*_NUM_THREADS env var is set,
         * OMP_NUM_THREADS also has to be set */
        if (bFullOmpSupport && getenv("OMP_NUM_THREADS") == NULL)
        {
            gmx_fatal(FARGS, "%s=%d is set, the default number of threads also "
                      "needs to be set with OMP_NUM_THREADS!",
                      modth_env_var[m], nth);
        }

        /* with the group scheme warn if any env var except PME is set */
        if (!bFullOmpSupport)
        {
            if (m != emntPME)
            {
                gmx_warning("%s=%d is set, but OpenMP multithreading is not "
                            "supported in %s!",
                            modth_env_var[m], nth, mod_name[m]);
                nth = 1;
            }
        }

        /* only babble if we are really overriding with a different value */
        if ((bSepPME && m == emntPME && nth != modth.gnth_pme) || (nth != modth.gnth))
        {
            sprintf(sbuf, "%s=%d set, overriding the default number of %s threads",
                    modth_env_var[m], nth, mod_name[m]);
            if (bSimMaster)
            {
                fprintf(stderr, "\n%s\n", sbuf);
            }
            if (fplog)
            {
                fprintf(fplog, "%s\n", sbuf);
            }
        }
    }
    else
    {
        /* pick the global PME node nthreads if we are setting the number
         * of threads in separate PME nodes  */
        nth = (bSepPME && m == emntPME) ? modth.gnth_pme : modth.gnth;
    }

    gmx_omp_nthreads_set(m, nth);
}