C++ (Cpp) gt_string_distri_new Examples

Example #1

File: gff3_visitor.c Project: ggonnella/genometools

static void gt_gff3_visitor_init(GtGFF3Visitor *gff3_visitor)
{
  gff3_visitor->version_string_shown = false;
  gff3_visitor->fasta_directive_shown = false;
  gff3_visitor->id_counter = gt_string_distri_new();
  gff3_visitor->feature_node_to_id_array =
    gt_hashmap_new(GT_HASH_DIRECT, NULL, (GtFree) gt_array_delete);
  gff3_visitor->feature_node_to_unique_id_str =
    gt_hashmap_new(GT_HASH_DIRECT, NULL, (GtFree) gt_str_delete);
  gff3_visitor->fasta_width = 0;
  gff3_visitor->used_ids = gt_cstr_table_new();
  /* XXX */
  gff3_visitor->retain_ids = getenv("GT_RETAINIDS") ? true : false;
  gff3_visitor->allow_nonunique_ids = false;
}

Example #2

File: gff3_visitor.c Project: 9beckert/TIR

GtNodeVisitor* gt_gff3_visitor_new(GtFile *outfp)
{
  GtNodeVisitor *nv = gt_node_visitor_create(gt_gff3_visitor_class());
  GtGFF3Visitor *gff3_visitor = gff3_visitor_cast(nv);
  gff3_visitor->version_string_shown = false;
  gff3_visitor->fasta_directive_shown = false;
  gff3_visitor->id_counter = gt_string_distri_new();
  gff3_visitor->feature_node_to_id_array =
    gt_hashmap_new(GT_HASH_DIRECT, NULL, (GtFree) gt_array_delete);
  gff3_visitor->feature_node_to_unique_id_str =
    gt_hashmap_new(GT_HASH_DIRECT, NULL, (GtFree) gt_str_delete);
  gff3_visitor->fasta_width = 0;
  gff3_visitor->outfp = outfp;
  gff3_visitor->used_ids = gt_cstr_table_new();
  gff3_visitor->retain_ids = false;
  return nv;
}