DiagnosticTreatNeg::DiagnosticTreatNeg()
: SimpleDiagnostic()
, negative_diagnosis_event()
, defaulters_event()
{
initSimTypes( 1, "TB_SIM" );
}
ImportPressure::ImportPressure()
: duration_counter(0)
, num_imports(0)
{
LOG_DEBUG_F( "ctor\n" );
initSimTypes( 1, "GENERIC_SIM" );
}
// BaseNodeIntervention
BaseNodeIntervention::BaseNodeIntervention()
: cost_per_unit(0.0f)
, expired(false)
{
initSimTypes( 1, "*" );
LOG_DEBUG_F("New intervention, cost_per_unit = %f\n", cost_per_unit);
}
Outbreak::Outbreak() : import_age(DAYSPERYEAR)
{
initSimTypes( 11, "GENERIC_SIM" , "VECTOR_SIM" , "MALARIA_SIM", "AIRBORNE_SIM", "POLIO_SIM", "TB_SIM", "TBHIV_SIM", "STI_SIM", "HIV_SIM", "PY_SIM", "TYPHOID_SIM" );
initConfigTypeMap( "Antigen", &antigen, Antigen_DESC_TEXT, 0, 10, 0 );
initConfigTypeMap( "Genome", &genome, Genome_DESC_TEXT, -1, 16777216, 0 );
initConfigTypeMap( "Incubation_Period_Override", &incubation_period_override, Incubation_Period_Override_DESC_TEXT,-1, INT_MAX, -1);
}
SimpleHousingModification::SimpleHousingModification()
: killing_effect( nullptr )
, blocking_effect( nullptr )
{
initSimTypes( 2, "VECTOR_SIM", "MALARIA_SIM" );
initConfigTypeMap("Cost_To_Consumer", &cost_per_unit, HM_Cost_To_Consumer_DESC_TEXT, 0, 999999, 8.0);
}
AbstractBednet::AbstractBednet()
: BaseIntervention()
, m_pEffectKilling( nullptr )
, m_pEffectBlocking( nullptr )
, m_pConsumer( nullptr )
{
initSimTypes( 2, "MALARIA_SIM", "VECTOR_SIM" );
}
InputEIR::InputEIR()
: BaseNodeIntervention()
, today(0)
, daily_EIR(0.0f)
, risk_function(nullptr)
{
initSimTypes( 1, "MALARIA_SIM" ); // using sporozoite challenge
}
BaseIntervention::BaseIntervention()
: cost_per_unit(0.0f)
, expired(false)
, dont_allow_duplicates(false)
{
//total_intervention_counter++;
initSimTypes( 1, "*" );
initConfigTypeMap( "Dont_Allow_Duplicates", &dont_allow_duplicates, Dont_Allow_Duplicates_DESC_TEXT, false );
//LOG_DEBUG_F("New intervention, total_intervention_counter = %d\n", total_intervention_counter);
}
DiagnosticTreatNeg::DiagnosticTreatNeg()
: SimpleDiagnostic()
, negative_diagnosis_config()
, negative_diagnosis_event()
, defaulters_config()
, defaulters_event()
, m_gets_positive_test_intervention(false)
{
initSimTypes( 2, "TB_SIM", "TBHIV_SIM" );
days_to_diagnosis.handle = std::bind( &DiagnosticTreatNeg::onDiagnosisComplete, this, 0.0f );
}
HIVDelayedIntervention::HIVDelayedIntervention()
: DelayedIntervention()
, year2DelayMap()
, days_remaining(-1)
, broadcast_event()
, broadcast_on_expiration_event()
{
initSimTypes(1, "HIV_SIM");
delay_distribution.AddSupportedType( DistributionFunction::PIECEWISE_CONSTANT, "", "", "", "" );
delay_distribution.AddSupportedType( DistributionFunction::PIECEWISE_LINEAR, "", "", "", "" );
}
HIVSimpleDiagnostic::HIVSimpleDiagnostic()
: SimpleDiagnostic() // true implies only support events in SimpleDiagnostic
, firstUpdate(true)
, result_of_positive_test(false)
, original_days_to_diagnosis(0.0)
, negative_diagnosis_event()
{
initSimTypes(2, "HIV_SIM", "TBHIV_SIM");
initConfigTypeMap("Days_To_Diagnosis", &days_to_diagnosis, SD_Days_To_Diagnosis_DESC_TEXT, FLT_MAX, 0);
days_to_diagnosis.handle = std::bind( &HIVSimpleDiagnostic::Callback, this, std::placeholders::_1 );
}
IncidenceCounterSurveillance::IncidenceCounterSurveillance()
: IncidenceCounter()
, m_CounterPeriod( 0 )
, m_CounterPeriod_current( 0 )
, m_CounterType( CounterType::PERIODIC )
, m_CounterEventType( EventType::INDIVIDUAL )
, m_TriggerConditionList()
, m_TriggerConditionListNode()
, m_TriggerConditionListCoordinator()
, m_PercentageEventsToCountIndividual()
, m_PercentageEventsToCountNode()
, m_PercentageEventsToCountCoordinator()
, m_PercentageEventsCounted( 0 )
{
initSimTypes(1, "*");
}
DiagnosticTreatNeg::DiagnosticTreatNeg( const DiagnosticTreatNeg& master )
: SimpleDiagnostic( master )
, negative_diagnosis_config(master.negative_diagnosis_config)
, negative_diagnosis_event(master.negative_diagnosis_event)
//, defaulters_config(master.defaulters_config)
, defaulters_event(master.defaulters_event)
, m_gets_positive_test_intervention(master.m_gets_positive_test_intervention)
{
initSimTypes( 2, "TB_SIM", "TBHIV_SIM" );
// !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
// !!! IndividualInterventionConfig - the copy constructor and assignment operator are different.
// !!! I needed to use the assignment operator to get this to work correctly.
// !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
defaulters_config = master.defaulters_config;
days_to_diagnosis.handle = std::bind( &DiagnosticTreatNeg::onDiagnosisComplete, this, 0.0f );
}
HIVSimpleDiagnostic::HIVSimpleDiagnostic()
: SimpleDiagnostic() // true implies only support events in SimpleDiagnostic
, abortStates()
, cascadeState("")
, firstUpdate(true)
, result_of_positive_test(false)
, original_days_to_diagnosis(0.0)
, negative_diagnosis_event()
{
initSimTypes(1, "HIV_SIM");
// in a refactor, these might be lifted to a common HIVIntervention class
abortStates.value_source = "Valid_Cascade_States.*";
initConfigTypeMap("Abort_States", &abortStates, HIV_Abort_States_DESC_TEXT);
initConfigTypeMap("Cascade_State", &cascadeState, HIV_Cascade_State_DESC_TEXT);
initConfigTypeMap("Days_To_Diagnosis", &days_to_diagnosis, SD_Days_To_Diagnosis_DESC_TEXT, 0, FLT_MAX, 0);
}
StiCoInfectionDiagnostic::StiCoInfectionDiagnostic() : SimpleDiagnostic()
{
initSimTypes( 2, "STI_SIM", "HIV_SIM" );
}
