Example #1
0
void htmlLinkOut(char *db, struct altSpliceSite *as, FILE *out)
{
fprintf(out,"<tr><td><a target=\"browser\" "
	"href=\"http://hgwdev-sugnet.gi.ucsc.edu/cgi-bin/hgTracks?db=%s&position=%s:%d-%d&altGraphXCon=full\">",
       db, as->chrom, as->chromStart-50, maxInArray(as->altStarts, as->altCount)+50);
fprintf(out,"%s (%d)</a></td>", as->agName, as->altCount-1);
fprintf(out,"<td>%s</td>", nameForType(as));
if(as->altCount == 2)
    fprintf(out,"<td>%d</td></tr>\n", as->altBpEnds[1] - as->altBpStarts[1]);
else
    fprintf(out,"<td>N/A</td></tr>\n");
}
Example #2
0
void bedViewOut(struct altSpliceSite *as, FILE *out)
{
struct bed *bed = NULL;
AllocVar(bed);
bed->chrom = cloneString(as->chrom);
bed->chromStart  = as->chromStart;
bed->chromEnd  = maxInArray(as->altStarts, as->altCount);
AllocArray(bed->chromStarts, 2);
AllocArray(bed->blockSizes, 2);
bed->thickStart = as->altBpStarts[1];
bed->thickEnd = as->altBpEnds[1];
bed->blockCount = 2;
bed->chromStarts[0] = 0;
bed->chromStarts[1] = bed->chromEnd - bed->chromStart -1; 
bed->blockSizes[0] = bed->blockSizes[1] = 1;
bed->name = cloneString(as->agName);
bed->score = as->spliceTypes[1];
safef(bed->strand, sizeof(bed->strand), "%s", as->strand);
bedTabOutN(bed, 12, out);
bedFree(&bed);
}
Example #3
0
int main(int argc, char** argv) {
  printf("\nHomework 3\n");

  int array[256];
  for (int i = 0; i < 256; ++i) {
    array[i] = 0;
  }

  int N;
  scanf("%i", &N);

  for (int i = 0; i < N; ++i) {
    scanf("%i", &array[i]);
  }

  int max = maxInArray(array, N);

  printf("Array: %i\n", max);

  return 0;
}