void run_and_log_n_times( FILE * f, int type, p_query query, int hit_count, int bit_width, int iterations ) {
for( int i = 0; i < iterations; i++ ) {
double time = run_alignment( type, query, hit_count, bit_width );
log_to_file( f, ",%lf", time );
}
log_to_file( f, "\n" );
}
//======================================================================
void quick_align::interaction(){
std::string key_user_wants_to_satrt_quick_mirror_alignment ="q";
add_control(key_user_wants_to_satrt_quick_mirror_alignment,
"start quick mirror alignment");
std::string key_user_wants_to_end_quick_mirror_alignment ="back";
add_control(key_user_wants_to_end_quick_mirror_alignment,
"back to main menu");
std::string user_input;
std::stringstream out;
bool flag_user_wants_to_align_mirrors = true;
do{
//==============================================================
// prompt snapshot options to command line
//==============================================================
update_status_prompt(get_quick_alignment_prompt());
//==============================================================
// get input of user via command line
//==============================================================
get_user_input();
//==============================================================
// interpret answer of user
//==============================================================
if(valid_user_input.
compare(key_user_wants_to_end_quick_mirror_alignment)==0){
flag_user_wants_to_align_mirrors = false;
}
//==================================================================
if(valid_user_input.
compare(key_user_wants_to_satrt_quick_mirror_alignment)==0){
run_alignment();
}
//==================================================================
}while(flag_user_wants_to_align_mirrors);
}
//======================================================================
void quick_align::start_alignment(){
if(verbosity){
std::cout<<"quick_align -> start_alignment() -> start"<<std::endl;
}
// check whether there is a mirror to work with or not
if(pointer_to_reflector->is_there_a_mirror_to_work_with()){
if(verbosity){
std::cout<<"quick_align -> start_alignment() -> ";
std::cout<<"working on mirror ID ";
std::cout<<pointer_to_reflector->
pointer_to_current_mirror_to_work_with->get_mirror_ID();
std::cout<<std::endl;
}
// run alignment
run_alignment();
}else{
if(verbosity){
std::cout<<"quick_align -> start_alignment() -> ";
std::cout<<"there is no mirror set to work with!"<<std::endl;
}
}
}
