Example #1
0
int main(int argc, char *argv[])
{
    int i,j,p=0;
    char *filename = default_filename;
    SMat sm = (SMat)malloc(sizeof(struct smat));
    if (argc == 2) {
	filename = argv[1];
    }
    sm = svdLoadSparseMatrix(filename, SVD_F_ST);

    printf("col: %ld\n", sm->cols);
    printf("row: %ld\n", sm->rows);
    printf("val: %ld\n", sm->vals);
    for (i=0;i<sm->cols;++i) {
	for (j=0;j<sm->rows;++j) {
	    if (sm->rowind[p] == j) {
		printf("%.4lf  ", sm->value[p++]);
	    }
	    else {
		printf("     0  ");
	    }
	}
	printf("\n");
    }
    free(sm);
    return 0;
}
Example #2
0
int main(int argc, char *argv[]) {
  extern char *optarg;
  extern int optind;
  int opt;

  SVDRec R = NULL;
  SMat A = NULL;

  char transpose = FALSE;
  int readFormat = SVD_F_ST;
  int writeFormat = SVD_F_DT;
  int algorithm = LAS2;
  int iterations = 0;
  int dimensions = 0;
  char *vectorFile = NULL;
  double las2end[2] = {-1.0e-30, 1.0e-30};
  double kappa = 1e-6;
  double exetime;

  while ((opt = getopt(argc, argv, "a:c:d:e:hk:i:o:r:tv:w:")) != -1) {
    switch (opt) {
    case 'a':
      if (!strcasecmp(optarg, "las2"))
        algorithm = LAS2;
      else fatalError("unknown algorithm: %s", optarg);
      break;
    case 'c':
      if (optind != argc - 1) printUsage(argv[0]);
      if (SVDVerbosity > 0) printf("Converting %s to %s\n", optarg, argv[optind]);
      if (SVD_IS_SPARSE(readFormat) && SVD_IS_SPARSE(writeFormat)) {
        SMat S = svdLoadSparseMatrix(optarg, readFormat);
        if (!S) fatalError("failed to read sparse matrix");
        if (transpose) {
          if (SVDVerbosity > 0) printf("  Transposing the matrix...\n");
          S = svdTransposeS(S); /* This leaks memory. */
        }
        svdWriteSparseMatrix(S, argv[optind], writeFormat);
      } else {
        DMat D = svdLoadDenseMatrix(optarg, readFormat);
        if (!D) fatalError("failed to read dense matrix");
        if (transpose) {
          if (SVDVerbosity > 0) printf("  Transposing the matrix...\n");
          D = svdTransposeD(D); /* This leaks memory. */
        }
        svdWriteDenseMatrix(D, argv[optind], writeFormat);
      }
      exit(0);
      break;
    case 'd':
      dimensions = atoi(optarg);
      if (dimensions < 0) fatalError("dimensions must be non-negative");
      break;
    case 'e':
      las2end[1] = atof(optarg);
      las2end[0] = -las2end[1];
      break;
    case 'h':
      printUsage(argv[0]);
      break;
    case 'k':
      kappa = atof(optarg);
      break;
    case 'i':
      iterations = atoi(optarg);
      break;
    case 'o':
      vectorFile = optarg;
      break;
    case 'r':
      if (!strcasecmp(optarg, "sth")) {
        readFormat = SVD_F_STH;
      } else if (!strcasecmp(optarg, "st")) {
        readFormat = SVD_F_ST;
      } else if (!strcasecmp(optarg, "dt")) {
        readFormat = SVD_F_DT;
      } else if (!strcasecmp(optarg, "sb")) {
        readFormat = SVD_F_SB;
      } else if (!strcasecmp(optarg, "db")) {
        readFormat = SVD_F_DB;
      } else fatalError("bad file format: %s", optarg);
      break;
    case 't':
      transpose = TRUE;
      break;
    case 'v':
      SVDVerbosity = atoi(optarg);
      /*if (SVDVerbosity) printf("Verbosity = %ld\n", SVDVerbosity);*/
      break;
    case 'w':
      if (!strcasecmp(optarg, "sth")) {
        writeFormat = SVD_F_STH;
      } else if (!strcasecmp(optarg, "st")) {
        writeFormat = SVD_F_ST;
      } else if (!strcasecmp(optarg, "dt")) {
        writeFormat = SVD_F_DT;
      } else if (!strcasecmp(optarg, "sb")) {
        writeFormat = SVD_F_SB;
      } else if (!strcasecmp(optarg, "db")) {
        writeFormat = SVD_F_DB;
      } else fatalError("bad file format: %s", optarg);
      break;
    default: printUsage(argv[0]);
    }
  }
  if (optind != argc - 1) printUsage(argv[0]);

  if (SVDVerbosity > 0) printf("Loading the matrix...\n");
  A = svdLoadSparseMatrix(argv[optind], readFormat);
  if (!A) fatalError("failed to read sparse matrix.  Did you specify the correct file type with the -r argument?");
  if (transpose) {
    if (SVDVerbosity > 0) printf("  Transposing the matrix...\n");
    SMat T = A;
    A = svdTransposeS(A);
    svdFreeSMat(T);
  }

  if (dimensions <= 0) dimensions = imin(A->rows, A->cols);

  exetime = timer();

  if (SVDVerbosity > 0) printf("Computing the SVD...\n");
  if (algorithm == LAS2) {
    if (!(R = svdLAS2(A, dimensions, iterations, las2end, kappa)))
      fatalError("error in svdLAS2");
  } else {
    fatalError("unknown algorithm");
  }

  exetime = timer() - exetime;
  if (SVDVerbosity > 0) {
    printf("\nELAPSED CPU TIME          = %6g sec.\n", exetime);
    printf("MULTIPLICATIONS BY A      = %6ld\n", 
           (SVDCount[SVD_MXV] - R->d) / 2 + R->d);
    printf("MULTIPLICATIONS BY A^T    = %6ld\n", 
           (SVDCount[SVD_MXV] - R->d) / 2);
  }

  if (vectorFile) {
    char filename[128];
    sprintf(filename, "%s-Ut", vectorFile);
    svdWriteDenseMatrix(R->Ut, filename, writeFormat);
    sprintf(filename, "%s-S", vectorFile);
    svdWriteDenseArray(R->S, R->d, filename, FALSE);
    sprintf(filename, "%s-Vt", vectorFile);
    svdWriteDenseMatrix(R->Vt, filename, writeFormat);
  }
  return 0;
}