bool Execute(PointStream< Real > *ps, CMeshO &pm, PoissonParam<Real> &pp, vcg::CallBackPos* cb)
{
Reset< Real >();
XForm4x4< Real > xForm=XForm4x4< Real >::Identity();
cb(1,"Running Screened Poisson Reconstruction\n" );
double t;
double tt=Time();
Real isoValue = 0;
Octree< Real > tree;
tree.threads = 1;
if( pp.MaxSolveDepthVal<0 ) pp.MaxSolveDepthVal = pp.MaxDepthVal;
// OctNode< TreeNodeData >::SetAllocator( MEMORY_ALLOCATOR_BLOCK_SIZE );
OctNode< TreeNodeData >::SetAllocator( 0 );
// int kernelDepth = KernelDepth.set ? KernelDepth.value : Depth.value-2;
if(pp.KernelDepthVal<0) pp.KernelDepthVal =pp.MaxDepthVal-2;
if( pp.KernelDepthVal>pp.MaxDepthVal )
return false;
cb(10,"Creating Tree");
double maxMemoryUsage;
t=Time();
// tree.maxMemoryUsage=0;
typename Octree< Real >::PointInfo* pointInfo = new typename Octree< Real >::PointInfo();
typename Octree< Real >::NormalInfo* normalInfo = new typename Octree< Real >::NormalInfo();
std::vector< Real >* kernelDensityWeights = new std::vector< Real >();
std::vector< Real >* centerWeights = new std::vector< Real >();
// int SetTree( char* fileName , int minDepth , int maxDepth , int fullDepth , int splatDepth , Real samplesPerNode ,
// Real scaleFactor , bool useConfidence , bool useNormalWeight , Real constraintWeight , int adaptiveExponent ,
// PointInfo& pointInfo , NormalInfo& normalInfo , std::vector< Real >& kernelDensityWeights , std::vector< Real >& centerWeights ,
// int boundaryType=BSplineElements< Degree >::NONE , XForm4x4< Real > xForm=XForm4x4< Real >::Identity , bool makeComplete=false );
TreeNodeData::NodeCount=0;
int pointCount = tree.template SetTree< Scalarm >( 0, pp.MinDepthVal , pp.MaxDepthVal , pp.FullDepthVal , pp.KernelDepthVal , pp.SamplesPerNodeVal ,
pp.ScaleVal , pp.ConfidenceFlag , pp.NormalWeightsFlag , pp.PointWeightVal , pp.AdaptiveExponentVal ,
*pointInfo , *normalInfo , *kernelDensityWeights , *centerWeights ,
ps, pp.BoundaryTypeVal , xForm , pp.CompleteFlag );
DumpOutput("# Tree set in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
DumpOutput( "Input Points: %d\n" , pointCount );
DumpOutput( "Leaves/Nodes: %d/%d\n" , tree.tree.leaves() , tree.tree.nodes() );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage() )/(1<<20) );
maxMemoryUsage = tree.maxMemoryUsage;
cb(20,"Settng Constraints");
t=Time() , tree.maxMemoryUsage=0;
Pointer( Real ) constraints = tree.SetLaplacianConstraints( *normalInfo );
delete normalInfo;
DumpOutput("# Constraints set in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage())/(1<<20) );
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
cb(70,"Solving Linear system");
t=Time() , tree.maxMemoryUsage=0;
Pointer( Real ) solution = tree.SolveSystem( *pointInfo , constraints , pp.ShowResidualFlag , pp.ItersVal , pp.MaxSolveDepthVal , pp.CGDepthVal , pp.CSSolverAccuracyVal );
delete pointInfo;
FreePointer( constraints );
DumpOutput( "# Linear system solved in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage() )/(1<<20) );
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
CoredFileMeshData< PlyValueVertex< float > > mesh;
tree.maxMemoryUsage=0;
t=Time();
isoValue = tree.GetIsoValue( solution , *centerWeights );
delete centerWeights;
DumpOutput( "Got average in: %f\n" , Time()-t );
DumpOutput( "Iso-Value: %e\n" , isoValue );
cb(80,"Building Isosurface");
t = Time() , tree.maxMemoryUsage = 0;
assert(kernelDensityWeights);
tree.GetMCIsoSurface( GetPointer( *kernelDensityWeights ) , solution , isoValue , mesh , true , !pp.NonManifoldFlag , false /*PolygonMesh.set*/ );
DumpOutput("# Got triangles in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
DumpOutput( "# Total Solve: %9.1f (s), %9.1f (MB)\n" , Time()-tt , maxMemoryUsage );
DumpOutput( "Vertices / Polygons: %d / %d\n" , mesh.outOfCorePointCount()+mesh.inCorePoints.size() , mesh.polygonCount() );
FreePointer( solution );
cb(90,"Creating Mesh");
mesh.resetIterator();
int vm = mesh.outOfCorePointCount()+mesh.inCorePoints.size();
vcg::tri::Allocator<CMeshO>::AddVertices(pm,vm);
int i;
for (i=0; i < int(mesh.inCorePoints.size()); i++){
pm.vert[i].P()[0] = mesh.inCorePoints[i].point[0];
pm.vert[i].P()[1] = mesh.inCorePoints[i].point[1];
pm.vert[i].P()[2] = mesh.inCorePoints[i].point[2];
pm.vert[i].Q() = mesh.inCorePoints[i].value;
}
for (int ii=0; ii < mesh.outOfCorePointCount(); ii++){
PlyValueVertex< float > p;
mesh.nextOutOfCorePoint(p);
pm.vert[ii+i].P()[0] = p.point[0];
pm.vert[ii+i].P()[1] = p.point[1];
pm.vert[ii+i].P()[2] = p.point[2];
pm.vert[ii+i].Q() = p.value;
}
std::vector< CoredVertexIndex > polygon;
while(mesh.nextPolygon( polygon ))
{
assert(polygon.size()==3);
int indV[3];
for( int i=0 ; i<int(polygon.size()) ; i++ )
{
if( polygon[i].inCore ) indV[i] = polygon[i].idx;
else indV[i]= polygon[i].idx + int( mesh.inCorePoints.size() );
}
vcg::tri::Allocator<CMeshO>::AddFace(pm, &pm.vert[indV[0]], &pm.vert[indV[1]], &pm.vert[indV[2]]);
}
cb(100,"Done");
return 1;
}
void PoissonReconstruction::PoissonRecon(int argc , char* argv[], const MagicDGP::Point3DSet* pPC, std::vector< PlyValueVertex< float > >& vertices, std::vector< std::vector< int > >& polygons)
{
cmdLineString
In( "in" ) ,
Out( "out" ) ,
VoxelGrid( "voxel" ) ,
XForm( "xForm" );
cmdLineReadable
Performance( "performance" ) ,
ShowResidual( "showResidual" ) ,
NoComments( "noComments" ) ,
PolygonMesh( "polygonMesh" ) ,
Confidence( "confidence" ) ,
NonManifold( "nonManifold" ) ,
ASCII( "ascii" ) ,
Density( "density" ) ,
Verbose( "verbose" );
cmdLineInt
Depth( "depth" , 8 ) ,
SolverDivide( "solverDivide" , 8 ) ,
IsoDivide( "isoDivide" , 8 ) ,
KernelDepth( "kernelDepth" ) ,
AdaptiveExponent( "adaptiveExp" , 1 ) ,
MinIters( "minIters" , 24 ) ,
FixedIters( "iters" , -1 ) ,
VoxelDepth( "voxelDepth" , -1 ) ,
MinDepth( "minDepth" , 5 ) ,
MaxSolveDepth( "maxSolveDepth" ) ,
BoundaryType( "boundary" , 1 ) ,
Threads( "threads" , omp_get_num_procs() );
cmdLineFloat
SamplesPerNode( "samplesPerNode" , 1.f ) ,
Scale( "scale" , 1.1f ) ,
SolverAccuracy( "accuracy" , float(1e-3) ) ,
PointWeight( "pointWeight" , 4.f );
cmdLineReadable* params[] =
{
&In , &Depth , &Out , &XForm ,
&SolverDivide , &IsoDivide , &Scale , &Verbose , &SolverAccuracy , &NoComments ,
&KernelDepth , &SamplesPerNode , &Confidence , &NonManifold , &PolygonMesh , &ASCII , &ShowResidual , &MinIters , &FixedIters , &VoxelDepth ,
&PointWeight , &VoxelGrid , &Threads , &MinDepth , &MaxSolveDepth ,
&AdaptiveExponent , &BoundaryType ,
&Density
};
cmdLineParse( argc , argv , sizeof(params)/sizeof(cmdLineReadable*) , params , 1 );
/*if( Density.set )
return Execute< 2 , PlyValueVertex< Real > , true >(argc , argv, pPC);
else
return Execute< 2 , PlyVertex< Real > , false >(argc , argv, pPC);*/
//Execute
int i;
int paramNum = sizeof(params)/sizeof(cmdLineReadable*);
int commentNum=0;
char **comments;
comments = new char*[paramNum + 7];
for( i=0 ; i<paramNum+7 ; i++ ) comments[i] = new char[1024];
//if( Verbose.set ) echoStdout=1;
XForm4x4< Real > xForm , iXForm;
if( XForm.set )
{
FILE* fp = fopen( XForm.value , "r" );
if( !fp )
{
fprintf( stderr , "[WARNING] Could not read x-form from: %s\n" , XForm.value );
xForm = XForm4x4< Real >::Identity();
}
else
{
for( int i=0 ; i<4 ; i++ ) for( int j=0 ; j<4 ; j++ ) fscanf( fp , " %f " , &xForm( i , j ) );
fclose( fp );
}
}
else xForm = XForm4x4< Real >::Identity();
iXForm = xForm.inverse();
//DumpOutput2( comments[commentNum++] , "Running Screened Poisson Reconstruction (Version 5.0)\n" , Degree );
//char str[1024];
//for( int i=0 ; i<paramNum ; i++ )
// if( params[i]->set )
// {
// params[i]->writeValue( str );
// if( strlen( str ) ) DumpOutput2( comments[commentNum++] , "\t--%s %s\n" , params[i]->name , str );
// else DumpOutput2( comments[commentNum++] , "\t--%s\n" , params[i]->name );
// }
double t;
double tt=Time();
Real isoValue = 0;
//Octree< Degree , OutputDensity > tree;
Octree< 2 , true > tree;
tree.threads = Threads.value;
//if( !In.set )
//{
// ShowUsage(argv[0]);
// return 0;
//}
if( !MaxSolveDepth.set ) MaxSolveDepth.value = Depth.value;
if( SolverDivide.value<MinDepth.value )
{
fprintf( stderr , "[WARNING] %s must be at least as large as %s: %d>=%d\n" , SolverDivide.name , MinDepth.name , SolverDivide.value , MinDepth.value );
SolverDivide.value = MinDepth.value;
}
if( IsoDivide.value<MinDepth.value )
{
fprintf( stderr , "[WARNING] %s must be at least as large as %s: %d>=%d\n" , IsoDivide.name , MinDepth.name , IsoDivide.value , IsoDivide.value );
IsoDivide.value = MinDepth.value;
}
OctNode< TreeNodeData< true > , Real >::SetAllocator( MEMORY_ALLOCATOR_BLOCK_SIZE );
t=Time();
int kernelDepth = KernelDepth.set ? KernelDepth.value : Depth.value-2;
tree.setBSplineData( Depth.value , BoundaryType.value );
//if( kernelDepth>Depth.value )
//{
// fprintf( stderr,"[ERROR] %s can't be greater than %s: %d <= %d\n" , KernelDepth.name , Depth.name , KernelDepth.value , Depth.value );
// return EXIT_FAILURE;
//}
//
int pointNumber = pPC->GetPointNumber();
std::vector<float> posList(pointNumber * 3);
std::vector<float> norList(pointNumber * 3);
for (int pIndex = 0; pIndex < pointNumber; pIndex++)
{
posList.at(3 * pIndex + 0) = pPC->GetPoint(pIndex)->GetPosition()[0];
posList.at(3 * pIndex + 1) = pPC->GetPoint(pIndex)->GetPosition()[1];
posList.at(3 * pIndex + 2) = pPC->GetPoint(pIndex)->GetPosition()[2];
norList.at(3 * pIndex + 0) = pPC->GetPoint(pIndex)->GetNormal()[0];
norList.at(3 * pIndex + 1) = pPC->GetPoint(pIndex)->GetNormal()[1];
norList.at(3 * pIndex + 2) = pPC->GetPoint(pIndex)->GetNormal()[2];
}
//
double maxMemoryUsage;
t=Time() , tree.maxMemoryUsage=0;
//int pointCount = tree.setTree( In.value , Depth.value , MinDepth.value , kernelDepth , Real(SamplesPerNode.value) , Scale.value , Confidence.set , PointWeight.value , AdaptiveExponent.value , xForm );
int pointCount = tree.setTree( posList, norList, Depth.value , MinDepth.value , kernelDepth , Real(SamplesPerNode.value) , Scale.value , Confidence.set , PointWeight.value , AdaptiveExponent.value , xForm );
tree.ClipTree();
tree.finalize( IsoDivide.value );
/*DumpOutput2( comments[commentNum++] , "# Tree set in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
DumpOutput( "Input Points: %d\n" , pointCount );
DumpOutput( "Leaves/Nodes: %d/%d\n" , tree.tree.leaves() , tree.tree.nodes() );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage() )/(1<<20) );*/
maxMemoryUsage = tree.maxMemoryUsage;
t=Time() , tree.maxMemoryUsage=0;
tree.SetLaplacianConstraints();
/*DumpOutput2( comments[commentNum++] , "# Constraints set in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage())/(1<<20) );*/
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
t=Time() , tree.maxMemoryUsage=0;
tree.LaplacianMatrixIteration( SolverDivide.value, ShowResidual.set , MinIters.value , SolverAccuracy.value , MaxSolveDepth.value , FixedIters.value );
/*DumpOutput2( comments[commentNum++] , "# Linear system solved in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage() )/(1<<20) );*/
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
CoredFileMeshData< PlyValueVertex< Real > > mesh;
if( Verbose.set ) tree.maxMemoryUsage=0;
t=Time();
isoValue = tree.GetIsoValue();
//DumpOutput( "Got average in: %f\n" , Time()-t );
//DumpOutput( "Iso-Value: %e\n" , isoValue );
if( VoxelGrid.set )
{
double t = Time();
FILE* fp = fopen( VoxelGrid.value , "wb" );
if( !fp ) fprintf( stderr , "Failed to open voxel file for writing: %s\n" , VoxelGrid.value );
else
{
int res;
Pointer( Real ) values = tree.GetSolutionGrid( res , isoValue , VoxelDepth.value );
fwrite( &res , sizeof(int) , 1 , fp );
if( sizeof(Real)==sizeof(float) ) fwrite( values , sizeof(float) , res*res*res , fp );
else
{
float *fValues = new float[res*res*res];
for( int i=0 ; i<res*res*res ; i++ ) fValues[i] = float( values[i] );
fwrite( fValues , sizeof(float) , res*res*res , fp );
delete[] fValues;
}
fclose( fp );
DeletePointer( values );
}
//DumpOutput( "Got voxel grid in: %f\n" , Time()-t );
}
if( Out.set )
{
t = Time() , tree.maxMemoryUsage = 0;
tree.GetMCIsoTriangles( isoValue , IsoDivide.value , &mesh , 0 , 1 , !NonManifold.set , PolygonMesh.set );
//if( PolygonMesh.set ) DumpOutput2( comments[commentNum++] , "# Got polygons in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
//else DumpOutput2( comments[commentNum++] , "# Got triangles in: %9.1f (s), %9.1f (MB)\n" , Time()-t , tree.maxMemoryUsage );
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
//DumpOutput2( comments[commentNum++],"# Total Solve: %9.1f (s), %9.1f (MB)\n" , Time()-tt , maxMemoryUsage );
//if( NoComments.set )
//{
// if( ASCII.set ) PlyWritePolygons( Out.value , &mesh , PLY_ASCII , NULL , 0 , iXForm );
// else PlyWritePolygons( Out.value , &mesh , PLY_BINARY_NATIVE , NULL , 0 , iXForm );
//}
//else
//{
// if( ASCII.set ) PlyWritePolygons( Out.value , &mesh , PLY_ASCII , comments , commentNum , iXForm );
// else PlyWritePolygons( Out.value , &mesh , PLY_BINARY_NATIVE , comments , commentNum , iXForm );
//}
vertices.clear();
polygons.clear();
int incorePointNum = int( mesh.inCorePoints.size() );
int outofcorePointNum = mesh.outOfCorePointCount();
DebugLog << "incorePointNum: " << incorePointNum << std::endl;
DebugLog << "outofcorePointNum: " << outofcorePointNum << std::endl;
mesh.resetIterator();
for(int pIndex = 0 ; pIndex < incorePointNum ; pIndex++ )
{
PlyValueVertex< Real > vertex = iXForm * mesh.inCorePoints[pIndex];
vertices.push_back(vertex);
//ply_put_element(ply, (void *) &vertex);
}
for(int pIndex = 0; pIndex < outofcorePointNum; pIndex++ )
{
PlyValueVertex< Real > vertex;
mesh.nextOutOfCorePoint( vertex );
vertex = iXForm * ( vertex );
vertices.push_back(vertex);
//ply_put_element(ply, (void *) &vertex);
}
int polyNum = mesh.polygonCount();
DebugLog << "polyNum: " << polyNum << std::endl;
for (int pIndex = 0; pIndex < polyNum; pIndex++)
{
std::vector< CoredVertexIndex > coreIndex;
mesh.nextPolygon(coreIndex);
std::vector< int > pureIndex;
for (int ii = 0; ii < coreIndex.size(); ii++)
{
if (coreIndex.at(ii).inCore)
{
pureIndex.push_back(coreIndex.at(ii).idx);
}
else
{
pureIndex.push_back(coreIndex.at(ii).idx + incorePointNum);
}
}
if (coreIndex.size() != 3)
{
DebugLog << "Error: coreIndex.size: " << coreIndex.size() << std::endl;
}
polygons.push_back(pureIndex);
}
//just for test
/*DebugLog << "Export inter object" << std::endl;
std::ofstream fout("pc_inter.obj");
for (int pIndex = 0; pIndex < vertices.size(); pIndex++)
{
PlyValueVertex< float > vert = vertices.at(pIndex);
fout << "v " << vert.point[0] << " " << vert.point[1] << " " << vert.point[2] << std::endl;
}
for (int pIndex = 0; pIndex < polygons.size(); pIndex++)
{
fout << "f " << polygons.at(pIndex).at(0) + 1 << " " << polygons.at(pIndex).at(1) + 1 << " " << polygons.at(pIndex).at(2) + 1 << std::endl;
}
fout.close();*/
}
}
int Execute( int argc , char* argv[] )
{
Reset< Real >();
int i;
int paramNum = sizeof(params)/sizeof(cmdLineReadable*);
int commentNum=0;
char **comments;
comments = new char*[paramNum+7];
for( i=0 ; i<paramNum+7 ; i++ ) comments[i] = new char[1024];
if( Verbose.set ) echoStdout=1;
XForm4x4< Real > xForm , iXForm;
if( XForm.set )
{
FILE* fp = fopen( XForm.value , "r" );
if( !fp )
{
fprintf( stderr , "[WARNING] Could not read x-form from: %s\n" , XForm.value );
xForm = XForm4x4< Real >::Identity();
}
else
{
for( int i=0 ; i<4 ; i++ ) for( int j=0 ; j<4 ; j++ )
{
float f;
fscanf( fp , " %f " , &f );
xForm(i,j) = (Real)f;
}
fclose( fp );
}
}
else xForm = XForm4x4< Real >::Identity();
iXForm = xForm.inverse();
DumpOutput2( comments[commentNum++] , "Running Screened Poisson Reconstruction (Version 6.13)\n" );
char str[1024];
for( int i=0 ; i<paramNum ; i++ )
if( params[i]->set )
{
params[i]->writeValue( str );
if( strlen( str ) ) DumpOutput2( comments[commentNum++] , "\t--%s %s\n" , params[i]->name , str );
else DumpOutput2( comments[commentNum++] , "\t--%s\n" , params[i]->name );
}
double t;
double tt=PTime();
Real isoValue = 0;
Octree< Real > tree;
tree.threads = Threads.value;
if( !In.set )
{
ShowUsage(argv[0]);
return 0;
}
if( !MaxSolveDepth.set ) MaxSolveDepth.value = Depth.value;
OctNode< TreeNodeData >::SetAllocator( MEMORY_ALLOCATOR_BLOCK_SIZE );
t=PTime();
int kernelDepth = KernelDepth.set ? KernelDepth.value : Depth.value-2;
if( kernelDepth>Depth.value )
{
fprintf( stderr,"[ERROR] %s can't be greater than %s: %d <= %d\n" , KernelDepth.name , Depth.name , KernelDepth.value , Depth.value );
return EXIT_FAILURE;
}
double maxMemoryUsage;
t=PTime() , tree.maxMemoryUsage=0;
typename Octree< Real >::PointInfo* pointInfo = new typename Octree< Real >::PointInfo();
typename Octree< Real >::NormalInfo* normalInfo = new typename Octree< Real >::NormalInfo();
std::vector< Real >* kernelDensityWeights = new std::vector< Real >();
std::vector< Real >* centerWeights = new std::vector< Real >();
PointStream< float >* pointStream;
char* ext = GetFileExtension( In.value );
if ( !strcasecmp( ext , "bnpts" ) ) pointStream = new BinaryPointStream< float >( In.value );
else if( !strcasecmp( ext , "ply" ) ) pointStream = new PLYPointStream< float >( In.value );
else pointStream = new ASCIIPointStream< float >( In.value );
delete[] ext;
int pointCount = tree.template SetTree< float >( pointStream , MinDepth.value , Depth.value , FullDepth.value , kernelDepth , Real(SamplesPerNode.value) , Scale.value , Confidence.set , NormalWeights.set , PointWeight.value , AdaptiveExponent.value , *pointInfo , *normalInfo , *kernelDensityWeights , *centerWeights , BoundaryType.value , xForm , Complete.set );
if( !Density.set ) delete kernelDensityWeights , kernelDensityWeights = NULL;
DumpOutput2( comments[commentNum++] , "# Tree set in: %9.1f (s), %9.1f (MB)\n" , PTime()-t , tree.maxMemoryUsage );
DumpOutput( "Input Points: %d\n" , pointCount );
DumpOutput( "Leaves/Nodes: %d/%d\n" , tree.tree.leaves() , tree.tree.nodes() );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage() )/(1<<20) );
maxMemoryUsage = tree.maxMemoryUsage;
t=PTime() , tree.maxMemoryUsage=0;
Pointer( Real ) constraints = tree.SetLaplacianConstraints( *normalInfo );
delete normalInfo;
DumpOutput2( comments[commentNum++] , "# Constraints set in: %9.1f (s), %9.1f (MB)\n" , PTime()-t , tree.maxMemoryUsage );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage())/(1<<20) );
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
t=PTime() , tree.maxMemoryUsage=0;
Pointer( Real ) solution = tree.SolveSystem( *pointInfo , constraints , ShowResidual.set , Iters.value , MaxSolveDepth.value , CGDepth.value , CSSolverAccuracy.value );
delete pointInfo;
FreePointer( constraints );
DumpOutput2( comments[commentNum++] , "# Linear system solved in: %9.1f (s), %9.1f (MB)\n" , PTime()-t , tree.maxMemoryUsage );
DumpOutput( "Memory Usage: %.3f MB\n" , float( MemoryInfo::Usage() )/(1<<20) );
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
CoredFileMeshData< Vertex > mesh;
if( Verbose.set ) tree.maxMemoryUsage=0;
t=PTime();
isoValue = tree.GetIsoValue( solution , *centerWeights );
delete centerWeights;
DumpOutput( "Got average in: %f\n" , PTime()-t );
DumpOutput( "Iso-Value: %e\n" , isoValue );
if( VoxelGrid.set )
{
double t = PTime();
FILE* fp = fopen( VoxelGrid.value , "wb" );
if( !fp ) fprintf( stderr , "Failed to open voxel file for writing: %s\n" , VoxelGrid.value );
else
{
int res;
Pointer( Real ) values = tree.Evaluate( solution , res , isoValue , VoxelDepth.value );
fwrite( &res , sizeof(int) , 1 , fp );
if( sizeof(Real)==sizeof(float) ) fwrite( values , sizeof(float) , res*res*res , fp );
else
{
float *fValues = new float[res*res*res];
for( int i=0 ; i<res*res*res ; i++ ) fValues[i] = float( values[i] );
fwrite( fValues , sizeof(float) , res*res*res , fp );
delete[] fValues;
}
fclose( fp );
DeletePointer( values );
}
DumpOutput( "Got voxel grid in: %f\n" , PTime()-t );
}
if( Out.set )
{
t = PTime() , tree.maxMemoryUsage = 0;
tree.GetMCIsoSurface( kernelDensityWeights ? GetPointer( *kernelDensityWeights ) : NullPointer< Real >() , solution , isoValue , mesh , true , !NonManifold.set , PolygonMesh.set );
if( PolygonMesh.set ) DumpOutput2( comments[commentNum++] , "# Got polygons in: %9.1f (s), %9.1f (MB)\n" , PTime()-t , tree.maxMemoryUsage );
else DumpOutput2( comments[commentNum++] , "# Got triangles in: %9.1f (s), %9.1f (MB)\n" , PTime()-t , tree.maxMemoryUsage );
maxMemoryUsage = std::max< double >( maxMemoryUsage , tree.maxMemoryUsage );
DumpOutput2( comments[commentNum++],"# Total Solve: %9.1f (s), %9.1f (MB)\n" , PTime()-tt , maxMemoryUsage );
if( NoComments.set )
{
if( ASCII.set ) PlyWritePolygons( Out.value , &mesh , PLY_ASCII , NULL , 0 , iXForm );
else PlyWritePolygons( Out.value , &mesh , PLY_BINARY_NATIVE , NULL , 0 , iXForm );
}
else
{
if( ASCII.set ) PlyWritePolygons( Out.value , &mesh , PLY_ASCII , comments , commentNum , iXForm );
else PlyWritePolygons( Out.value , &mesh , PLY_BINARY_NATIVE , comments , commentNum , iXForm );
}
DumpOutput( "Vertices / Polygons: %d / %d\n" , mesh.outOfCorePointCount()+mesh.inCorePoints.size() , mesh.polygonCount() );
}
FreePointer( solution );
return 1;
}
