ModelObjectsTemp GaussianProcessInterpolation::get_inputs()
const {
ModelObjectsTemp ret;
ModelObjectsTemp ret1 = mean_function_->get_inputs();
ret.insert(ret.end(), ret1.begin(), ret1.end());
ret.push_back(sigma_);
ModelObjectsTemp ret2 = covariance_function_->get_inputs();
ret.insert(ret.end(), ret2.begin(), ret2.end());
return ret;
}
ModelObjectsTemp HelixRestraint::do_get_inputs() const {
ModelObjectsTemp ps;
Model *m = get_model();
for (IMP::Vector<IMP::PointerMember<
core::MultipleBinormalRestraint> >::const_iterator td = dihedral_rs_.begin();
td != dihedral_rs_.end(); ++td){
ModelObjectsTemp bps = (*td)->get_inputs();
ps.insert(ps.end(), bps.begin(), bps.end());
}
for (ParticleIndexPairs::const_iterator tb = bonds_ON_.begin();
tb != bonds_ON_.end(); ++tb) {
ps.push_back(m->get_particle((*tb)[0]));
ps.push_back(m->get_particle((*tb)[1]));
}
return ps;
}
void ModelObject::validate_outputs() const {
if (!get_has_dependencies()) return;
IMP_IF_CHECK(USAGE_AND_INTERNAL) {
IMP_CHECK_OBJECT(this);
ModelObjectsTemp ret = do_get_outputs();
std::sort(ret.begin(), ret.end());
ret.erase(std::unique(ret.begin(), ret.end()), ret.end());
ModelObjectsTemp saved = get_model()->get_dependency_graph_outputs(this);
std::sort(saved.begin(), saved.end());
ModelObjectsTemp intersection;
std::set_intersection(saved.begin(), saved.end(), ret.begin(), ret.end(),
std::back_inserter(intersection));
IMP_USAGE_CHECK(
intersection.size() == ret.size(),
"Dependencies changed without invalidating dependencies."
<< " Make sure you call set_has_dependencies(false) any "
<< "time the list of dependencies changed. Object is " << get_name()
<< " of type " << get_type_name());
}
}