void AllocateProcessorQueue (ProcessorQueue &my_queue,ComputationPlanner &analysis_compute_plan, int numRegions)
{
//create queue for passing work to thread pool
my_queue.SetCpuQueue(new WorkerInfoQueue (numRegions*analysis_compute_plan.numBkgWorkers+1));
if (analysis_compute_plan.use_gpu_acceleration) {
if(analysis_compute_plan.numBkgWorkers_gpu) {
my_queue.AllocateGpuInfo(analysis_compute_plan.numBkgWorkers_gpu);
my_queue.SetGpuQueue(new WorkerInfoQueue (numRegions*analysis_compute_plan.numBkgWorkers_gpu+1));
}
}
// decide on whether to use both CPU and GPU for bkg model fitting jobs
if (analysis_compute_plan.use_gpu_only_fitting) {
my_queue.turnOffHeterogeneousComputing();
}
if (!analysis_compute_plan.gpu_multiflow_fit) {
my_queue.turnOffGpuMultiFlowFitting();
}
if (!analysis_compute_plan.gpu_singleflow_fit) {
my_queue.turnOffGpuSingleFlowFitting();
}
{
int cworker;
pthread_t work_thread;
// spawn threads for doing background correction/fitting work
for (cworker = 0; cworker < analysis_compute_plan.numBkgWorkers; cworker++)
{
int t = pthread_create (&work_thread, NULL, BkgFitWorkerCpu,
&my_queue);
pthread_detach(work_thread);
if (t)
fprintf (stderr, "Error starting thread\n");
}
}
fprintf (stdout, "Number of CPU threads for beadfind: %d\n", analysis_compute_plan.numBkgWorkers);
if (analysis_compute_plan.use_gpu_acceleration)
fprintf (stdout, "Number of GPU threads for background model: %d\n", analysis_compute_plan.numBkgWorkers_gpu);
else
fprintf (stdout, "Number of CPU threads for background model: %d\n", analysis_compute_plan.numBkgWorkers);
}
void AllocateProcessorQueue (ProcessorQueue &my_queue,ComputationPlanner &analysis_compute_plan, int numRegions)
{
//create queue for passing work to thread pool
my_queue.SetCpuQueue(new WorkerInfoQueue (numRegions*analysis_compute_plan.numBkgWorkers+1));
if (analysis_compute_plan.use_gpu_acceleration) {
if(analysis_compute_plan.numMultiFlowFitGpuWorkers) {
my_queue.AllocateMultiFitGpuInfo(analysis_compute_plan.numMultiFlowFitGpuWorkers);
my_queue.SetMultiFitGpuQueue(new WorkerInfoQueue (numRegions*analysis_compute_plan.numBkgWorkers_gpu+1));
}
if(analysis_compute_plan.numSingleFlowFitGpuWorkers) {
my_queue.AllocateSingleFitGpuInfo(analysis_compute_plan.numSingleFlowFitGpuWorkers);
my_queue.SetSingleFitGpuQueue(new WorkerInfoQueue (numRegions*analysis_compute_plan.numBkgWorkers_gpu+1));
}
}
{
int cworker;
pthread_t work_thread;
// spawn threads for doing background correction/fitting work
for (cworker = 0; cworker < analysis_compute_plan.numBkgWorkers; cworker++)
{
int t = pthread_create (&work_thread, NULL, BkgFitWorkerCpu,
&my_queue);
pthread_detach(work_thread);
if (t)
fprintf (stderr, "Error starting thread\n");
}
}
fprintf (stdout, "Number of CPU threads for beadfind: %d\n", analysis_compute_plan.numBkgWorkers);
if (analysis_compute_plan.use_gpu_acceleration)
fprintf (stdout, "Number of GPU threads for background model: %d\n", analysis_compute_plan.numBkgWorkers_gpu);
else
fprintf (stdout, "Number of CPU threads for background model: %d\n", analysis_compute_plan.numBkgWorkers);
}
