C++ (Cpp) path_t::push_back Examples

Example #1

File: align_path_match_descriptor.cpp Project: ctb/quast

static
void
apath_push(path_t& apath,
           path_segment& ps,
           const align_t t)
{

    if ( (0==ps.length) || (ps.type==t) ) return;
    apath.push_back(ps);
    ps.clear();
}

Example #2

File: align_path.cpp Project: ctb/quast

void
cigar_to_apath(const char* cigar,
               path_t& apath)
{
    using illumina::blt_util::parse_unsigned;

    assert(NULL != cigar);

    apath.clear();

    path_segment lps;
    const char* cptr(cigar);
    while (*cptr)
    {
        path_segment ps;
        // expect sequences of digits and cigar codes:
        if (! isdigit(*cptr)) unknown_cigar_error(cigar,cptr);
        ps.length = parse_unsigned(cptr);
        ps.type = cigar_code_to_segment_type(*cptr);
        if (ps.type == NONE) unknown_cigar_error(cigar,cptr);
        cptr++;
        if ((ps.type == PAD) || (ps.length == 0)) continue;

        if (ps.type != lps.type)
        {
            if (lps.type != NONE) apath.push_back(lps);
            lps = ps;
        }
        else
        {
            lps.length += ps.length;
        }
    }

    if (lps.type != NONE) apath.push_back(lps);
}