C++ (Cpp) String::substr Examples

Example #1

File: refine-polya.C Project: ReddyLab/FBI

void Application::processReverseFeature(int featureBegin,
					const BOOM::String &seq)
{
  int end=featureBegin;
  int begin=featureBegin-margin;
  if(begin<0) begin=0;
  BOOM::String subseq=
    BOOM::ProteinTrans::reverseComplement(seq.substr(begin,end-begin));
  margins.push_back(subseq);
}

Example #2

File: refine-polya.C Project: ReddyLab/FBI

void Application::processForwardFeature(int featureEnd,
					const BOOM::String &seq)
{
  int begin=featureEnd;
  int end=begin+margin;
  int len=seq.length();
  if(end>=len) end=len-1;
  BOOM::String subseq=seq.substr(begin,end-begin);
  margins.push_back(subseq);
}