int main( int argc, char** argv ) { // Contour import args.addOption("-fc", "-fc <freemanChain.fc> : FreemanChain file name", "freeman.fc" ); args.addOption("-sdp", "-sdp <contour.sdp> : Import a contour as a Sequence of Discrete Points (SDP format)", "contour.sdp" ); args.addOption("-sfp", "-sdp <contour.sdp> : Import a contour as a Sequence of Floating Points (SFP format)", "contour.sdp" ); // Display options args.addOption("-drawContourPoint", "-drawContourPoint <size> (double): display contour points as disk of radius <size> (default 1.0) ", "1.0" ); args.addBooleanOption("-fillContour", "-fillContour fill the contours with default color"); args.addOption("-lineWidth", "-lineWidth <width> : define the linewidth <width> of the contour (default 1.0) (SDP format)", "1.0"); args.addOption("-outputEPS", "-outputEPS <filename> specify eps format (default format output.eps)", "output.eps"); args.addOption("-outputSVG", "-outputSVG <filename> specify svg format. (default name output.svg)", "output.svg"); args.addOption("-outputFIG", "-outputFIG <filename> specify svg format. (default name output.fig)", "output.fig"); #ifdef WITH_CAIRO args.addOption("-outputPDF", "-outputPDF <filename> specify svg format. (default name output.pdf)", "output.pdf"); args.addOption("-outputPNG", "-outputPNG <filename> specify png format. (default name output.png)", "output.png"); args.addBooleanOption("-invertYaxis", "-invertYaxis: invert the Y axis for display contours (used only with --SDP) "); #endif #ifdef WITH_MAGICK args.addOption("-backgroundImage", "-backgroundImage <filename> <alpha> : display image as background with transparency alpha (defaut 1) (transparency works only if cairo is available)", "imageBG.png", "1.0" ); #endif args.addOption("-backgroundImageXFIG", "-backgroundImageXFIG <filename> <width> <height> : display image as background in XFIG format", "imageBG.png", "256","256" ); args.addOption("-scale", "-scale <value> 1: normal; >1 : larger ; <1 lower resolutions ) (default 1.0) ", "1.0"); bool parseOK= args.readArguments( argc, argv ); if(!parseOK || args.check("-h") || (! args.check("-fc") && ! args.check("-sdp") && ! args.check("-sfp"))){ trace.info()<<args.usage("displayContours", "Display discrete contours. \n Basic usage: \n \t displayContours [options] -fc <fileName> \n", ""); return 1; } double lineWidth = args.getOption("-lineWidth")->getFloatValue(0); double scale = args.getOption("-scale")->getIntValue(0); bool filled = args.check("-fillContour"); Board2D aBoard; aBoard.setUnit (0.05*scale, LibBoard::Board::UCentimeter); #ifdef WITH_MAGICK double alpha=args.getOption("-alphaBG")->getFloatValue(0); if(args.check("-backgroundImage")){ string imageName = args.check("-backgroundImage")->getValue(0); typedef ImageSelector<Z2i::Domain, unsigned char>::Type Image; DGtal::MagickReader<Image> reader; Image img = reader.importImage( imageName ); Z2i::Point ptInf = img.domain().lowerBound(); Z2i::Point ptSup = img.domain().upperBound(); unsigned int width = abs(ptSup.at(0)-ptInf.at(0)+1); unsigned int height = abs(ptSup.at(1)-ptInf.at(1)+1); aBoard.drawImage(imageName, 0-0.5,height-0.5, width, height, -1, alpha ); } #endif if(args.check("-backgroundImageXFIG")){ string imageName = args.getOption("-backgroundImageXFIG")->getValue(0); unsigned int width = args.getOption("-backgroundImageXFIG")->getIntValue(1); unsigned int height = args.getOption("-backgroundImageXFIG")->getIntValue(2); aBoard.drawImage(imageName, 0,height-1, width, height, -1, 1.0 ); } if(args.check("-fc")){ string fileName = args.getOption("-fc")->getValue(0); vector< FreemanChain<int> > vectFc = PointListReader< Z2i::Point>:: getFreemanChainsFromFile<int> (fileName); //aBoard << SetMode( vectFc.at(0).className(), "InterGrid" ); aBoard << CustomStyle( vectFc.at(0).className(), new CustomColors( Color::Red , (filled ? (Color::Black) : (Color::None)) ) ); for(unsigned int i=0; i<vectFc.size(); i++){ aBoard << vectFc.at(i) ; } } if( args.check("-sdp") || args.check("-sfp")){ bool drawPoints= args.check("-drawContourPoint"); bool invertYaxis = args.check("-invertYaxis"); double pointSize = args.getOption("-drawContourPoint")->getFloatValue(0); vector<LibBoard::Point> contourPt; if(args.check("-sdp")){ string fileName = args.getOption("-sdp")->getValue(0); vector< Z2i::Point > contour = PointListReader< Z2i::Point >::getPointsFromFile(fileName); for(unsigned int j=0; j<contour.size(); j++){ LibBoard::Point pt((double)(contour.at(j)[0]), (invertYaxis? (double)(-contour.at(j)[1]+contour.at(0)[1]):(double)(contour.at(j)[1]))); contourPt.push_back(pt); if(drawPoints){ aBoard.fillCircle(pt.x, pt.y, pointSize); } } } if(args.check("-sfp")){ string fileName = args.getOption("-sfp")->getValue(0); vector< PointVector<2,double> > contour = PointListReader< PointVector<2,double> >::getPointsFromFile(fileName); for(unsigned int j=0; j<contour.size(); j++){ LibBoard::Point pt((double)(contour.at(j)[0]), (invertYaxis? (double)(-contour.at(j)[1]+contour.at(0)[1]):(double)(contour.at(j)[1]))); contourPt.push_back(pt); if(drawPoints){ aBoard.fillCircle(pt.x, pt.y, pointSize); } } } aBoard.setPenColor(Color::Red); aBoard.setLineStyle (LibBoard::Shape::SolidStyle ); aBoard.setLineWidth (lineWidth); if(!filled){ aBoard.drawPolyline(contourPt); }else{ aBoard.fillPolyline(contourPt); } } if (args.check("-outputSVG")){ string outputFileName= args.getOption("-outputSVG")->getValue(0); aBoard.saveSVG(outputFileName.c_str()); } else if (args.check("-outputFIG")){ string outputFileName= args.getOption("-outputFIG")->getValue(0); aBoard.saveFIG(outputFileName.c_str()); } else if (args.check("-outputEPS")){ string outputFileName= args.getOption("-outputEPS")->getValue(0); aBoard.saveEPS(outputFileName.c_str()); } #ifdef WITH_CAIRO else if (args.check("-outputEPS")){ string outputFileName= args.getOption("-outputSVG")->getValue(0); aBoard.saveCairo(outputFileName.c_str(),Board2D::CairoEPS ); } else if (args.check("-outputPDF")){ string outputFileName= args.getOption("-outputPDF")->getValue(0); aBoard.saveCairo(outputFileName.c_str(),Board2D::CairoPDF ); } else if (args.check("-outputPNG")){ string outputFileName= args.getOption("-outputPNG")getValue(0); aBoard.saveCairo(outputFileName.c_str(),Board2D::CairoPNG ); } #endif else { //default output string outputFileName= "output.eps"; aBoard.saveEPS(outputFileName.c_str()); } }
int main( int argc, char** argv ) { // parse command line ---------------------------------------------- po::options_description general_opt("Allowed options are: "); general_opt.add_options() ("help,h", "display this message") ("FreemanChain,f", po::value<std::string>(), "FreemanChain file name") ("SDP", po::value<std::string>(), "Import a contour as a Sequence of Discrete Points (SDP format)") ("SFP", po::value<std::string>(), "Import a contour as a Sequence of Floating Points (SFP format)") ("drawContourPoint", po::value<double>(), "<size> display contour points as disk of radius <size>") ("lineWidth", po::value<double>()->default_value(1.0), "Define the linewidth of the contour (SDP format)") ("withProcessing", po::value<std::string>(), "Processing (used only with --FreemanChain):\n\t DSS segmentation {DSS}\n\t Maximal segments {MS}\n\t Faithful Polygon {FP}\n\t Minimum Length Polygon {MLP}") ("outputEPS", po::value<std::string>(), " <filename> specify eps format (default format output.eps)") ("outputSVG", po::value<std::string>(), " <filename> specify svg format.") ("outputFIG", po::value<std::string>(), " <filename> specify fig format.") #ifdef WITH_CAIRO ("outputPDF", po::value<std::string>(), "outputPDF <filename> specify pdf format. ") ("outputPNG", po::value<std::string>(), "outputPNG <filename> specify png format.") ("invertYaxis", " invertYaxis invert the Y axis for display contours (used only with --SDP)") #endif #ifdef WITH_MAGICK ("backgroundImage", po::value<std::string>(), "backgroundImage <filename> <alpha> : display image as background with transparency alpha (defaut 1) (transparency works only if cairo is available)") ("alphaBG", po::value<double>(), "alphaBG <value> 0-1.0 to display the background image in transparency (default 1.0)") #endif ("scale", po::value<double>(), "scale <value> 1: normal; >1 : larger ; <1 lower resolutions )"); po::variables_map vm; po::store(po::parse_command_line(argc, argv, general_opt), vm); po::notify(vm); if(vm.count("help")||argc<=1 || (not(vm.count("FreemanChain")) && not(vm.count("SDP")) && not(vm.count("SFP"))&& not(vm.count("backgroundImage")) ) ) { trace.info()<< "Display discrete contours. " <<std::endl << "Basic usage: "<<std::endl << "\t displayContours [options] --FreemanChain <fileName> --imageName image.png "<<std::endl << general_opt << "\n"; return 0; } double lineWidth= vm["lineWidth"].as<double>(); double scale=1.0; if(vm.count("scale")){ scale = vm["scale"].as<double>(); } Board2D aBoard; aBoard.setUnit (0.05*scale, LibBoard::Board::UCentimeter); #ifdef WITH_MAGICK double alpha=1.0; if(vm.count("alphaBG")){ alpha = vm["alphaBG"].as<double>(); } if(vm.count("backgroundImage")){ string imageName = vm["backgroundImage"].as<string>(); typedef ImageSelector<Z2i::Domain, unsigned char>::Type Image; DGtal::MagickReader<Image> reader; Image img = reader.importImage( imageName ); Z2i::Point ptInf = img.lowerBound(); Z2i::Point ptSup = img.upperBound(); unsigned int width = abs(ptSup.at(0)-ptInf.at(0)+1); unsigned int height = abs(ptSup.at(1)-ptInf.at(1)+1); aBoard.drawImage(imageName, 0-0.5,height-0.5, width, height, -1, alpha ); } #endif if(vm.count("FreemanChain")){ string fileName = vm["FreemanChain"].as<string>(); vector< FreemanChain<int> > vectFc = PointListReader< Z2i::Point>:: getFreemanChainsFromFile<int> (fileName); //aBoard << SetMode( vectFc.at(0).styleName(), "InterGrid" ); aBoard << CustomStyle( vectFc.at(0).styleName(), new CustomColors( Color::Red , Color::None ) ); for(unsigned int i=0; i<vectFc.size(); i++){ aBoard << vectFc.at(i) ; if(vm.count("withProcessing")){ std::string processingName = vm["withProcessing"].as<std::string>(); vector<Z2i::Point> vPts(vectFc.at(i).size()+1); copy ( vectFc.at(i).begin(), vectFc.at(i).end(), vPts.begin() ); bool isClosed; if ( vPts.at(0) == vPts.at(vPts.size()-1) ) { isClosed = true; vPts.pop_back(); } else isClosed = false; if (processingName == "DSS") { typedef ArithmeticalDSS<vector<Z2i::Point>::iterator,int,4> DSS4; typedef deprecated::GreedyDecomposition<DSS4> Decomposition4; //Segmentation DSS4 computer; Decomposition4 theDecomposition( vPts.begin(),vPts.end(),computer,isClosed ); //for each segment aBoard << SetMode( computer.styleName(), "BoundingBox" ); string styleName = computer.styleName() + "/BoundingBox"; for ( Decomposition4::SegmentIterator it = theDecomposition.begin(); it != theDecomposition.end(); ++it ) { DSS4 segment(*it); aBoard << CustomStyle( styleName, new CustomPenColor( DGtal::Color::Gray ) ); aBoard << segment; // draw each segment } } else if (processingName == "MS") { typedef ArithmeticalDSS<vector<Z2i::Point>::iterator,int,4> DSS4; typedef deprecated::MaximalSegments<DSS4> Decomposition4; //Segmentation DSS4 computer; Decomposition4 theDecomposition( vPts.begin(),vPts.end(),computer,isClosed ); //for each segment aBoard << SetMode( computer.styleName(), "BoundingBox" ); string styleName = computer.styleName() + "/BoundingBox"; for ( Decomposition4::SegmentIterator it = theDecomposition.begin(); it != theDecomposition.end(); ++it ) { DSS4 segment(*it); aBoard << CustomStyle( styleName, new CustomPenColor( DGtal::Color::Black ) ); aBoard << segment; // draw each segment } } else if (processingName == "FP") { typedef FP<vector<Z2i::Point>::iterator,int,4> FP; FP theFP( vPts.begin(),vPts.end(),isClosed ); aBoard << CustomStyle( theFP.styleName(), new CustomPenColor( DGtal::Color::Black ) ); aBoard << theFP; } else if (processingName == "MLP") { typedef FP<vector<Z2i::Point>::iterator,int,4> FP; FP theFP( vPts.begin(),vPts.end(),isClosed ); vector<FP::RealPoint> v( theFP.size() ); theFP.copyMLP( v.begin() ); //polyline to draw vector<LibBoard::Point> polyline; vector<FP::RealPoint>::const_iterator it = v.begin(); for ( ;it != v.end();++it) { FP::RealPoint p = (*it); polyline.push_back(LibBoard::Point(p[0],p[1])); } if (isClosed) { FP::RealPoint p = (*v.begin()); polyline.push_back(LibBoard::Point(p[0],p[1])); } aBoard.setPenColor(DGtal::Color::Black); aBoard.drawPolyline(polyline); } } } } if(vm.count("SDP") || vm.count("SFP")){ bool drawPoints= vm.count("drawContourPoint"); bool invertYaxis = vm.count("invertYaxis"); double pointSize=1.0; if(drawPoints){ pointSize = vm["drawContourPoint"].as<double>(); } vector<LibBoard::Point> contourPt; if(vm.count("SDP")){ string fileName = vm["SDP"].as<string>(); vector< Z2i::Point > contour = PointListReader< Z2i::Point >::getPointsFromFile(fileName); for(unsigned int j=0; j<contour.size(); j++){ LibBoard::Point pt((double)(contour.at(j)[0]), (invertYaxis? (double)(-contour.at(j)[1]+contour.at(0)[1]):(double)(contour.at(j)[1]))); contourPt.push_back(pt); if(drawPoints){ aBoard.fillCircle(pt.x, pt.y, pointSize); } } } if(vm.count("SFP")){ string fileName = vm["SFP"].as<string>(); vector< PointVector<2,double> > contour = PointListReader< PointVector<2,double> >::getPointsFromFile(fileName); for(unsigned int j=0; j<contour.size(); j++){ LibBoard::Point pt((double)(contour.at(j)[0]), (invertYaxis? (double)(-contour.at(j)[1]+contour.at(0)[1]):(double)(contour.at(j)[1]))); contourPt.push_back(pt); if(drawPoints){ aBoard.fillCircle(pt.x, pt.y, pointSize); } } } aBoard.setPenColor(Color::Red); aBoard.setLineStyle (LibBoard::Shape::SolidStyle ); aBoard.setLineWidth (lineWidth); aBoard.drawPolyline(contourPt); } if (vm.count("outputSVG")){ string outputFileName= vm["outputSVG"].as<string>(); aBoard.saveSVG(outputFileName.c_str()); } else if (vm.count("outputFIG")){ string outputFileName= vm["outputFIG"].as<string>(); aBoard.saveFIG(outputFileName.c_str()); } else if (vm.count("outputEPS")){ string outputFileName= vm["outputEPS"].as<string>(); aBoard.saveEPS(outputFileName.c_str()); } #ifdef WITH_CAIRO else if (vm.count("outputEPS")){ string outputFileName= vm["outputEPS"].as<string>(); aBoard.saveCairo(outputFileName.c_str(),Board2D::CairoEPS ); } else if (vm.count("outputPDF")){ string outputFileName= vm["outputPDF"].as<string>(); aBoard.saveCairo(outputFileName.c_str(),Board2D::CairoPDF ); } else if (vm.count("outputPNG")){ string outputFileName= vm["outputPNG"].as<string>(); aBoard.saveCairo(outputFileName.c_str(),Board2D::CairoPNG ); } #endif else { //default output string outputFileName= "output.eps"; aBoard.saveEPS(outputFileName.c_str()); } }
int main( int argc, char** argv ) { // parse command line ---------------------------------------------- po::options_description general_opt("Allowed options are: "); general_opt.add_options() ("help,h", "display this message") ("FreemanChain,f", po::value<std::string>(), "FreemanChain file name") ("SDP", po::value<std::string>(), "Import a contour as a Sequence of Discrete Points (SDP format)") ("SFP", po::value<std::string>(), "Import a contour as a Sequence of Floating Points (SFP format)") ("drawContourPoint", po::value<double>(), "<size> display contour points as disk of radius <size>") ("lineWidth", po::value<double>()->default_value(1.0), "Define the linewidth of the contour (SDP format)") ("outputEPS", po::value<std::string>(), " <filename> specify eps format (default format output.eps)") ("outputSVG", po::value<std::string>(), " <filename> specify svg format.") ("outputFIG", po::value<std::string>(), " <filename> specify fig format.") #ifdef WITH_CAIRO ("outputPDF", po::value<std::string>(), "outputPDF <filename> specify pdf format. ") ("outputPNG", po::value<std::string>(), "outputPNG <filename> specify png format.") ("invertYaxis", " invertYaxis invert the Y axis for display contours (used only with --SDP)") #endif #ifdef WITH_MAGICK ("backgroundImage", po::value<std::string>(), "backgroundImage <filename> <alpha> : display image as background with transparency alpha (defaut 1) (transparency works only if cairo is available)") ("alphaBG", po::value<double>(), "alphaBG <value> 0-1.0 to display the background image in transparency (default 1.0)") #endif ("scale", po::value<double>(), "scale <value> 1: normal; >1 : larger ; <1 lower resolutions )"); po::variables_map vm; po::store(po::parse_command_line(argc, argv, general_opt), vm); po::notify(vm); if(vm.count("help")||argc<=1 || (not(vm.count("FreemanChain")) && not(vm.count("SDP")) && not(vm.count("SFP"))&& not(vm.count("backgroundImage")) ) ) { trace.info()<< "Display discrete contours. " <<std::endl << "Basic usage: "<<std::endl << "\t displayContours [options] --FreemanChain <fileName> contours.fc --imageName image.png "<<std::endl << general_opt << "\n"; return 0; } double lineWidth= vm["lineWidth"].as<double>(); double scale=1.0; if(vm.count("scale")){ scale = vm["scale"].as<double>(); } DGtalBoard aBoard; aBoard.setUnit (0.05*scale, LibBoard::Board::UCentimeter); #ifdef WITH_MAGICK double alpha=1.0; if(vm.count("alphaBG")){ alpha = vm["alphaBG"].as<double>(); } if(vm.count("backgroundImage")){ string imageName = vm["backgroundImage"].as<string>(); typedef ImageSelector<Z2i::Domain, unsigned char>::Type Image; DGtal::MagickReader<Image> reader; Image img = reader.importImage( imageName ); Z2i::Point ptInf = img.lowerBound(); Z2i::Point ptSup = img.upperBound(); unsigned int width = abs(ptSup.at(0)-ptInf.at(0)+1); unsigned int height = abs(ptSup.at(1)-ptInf.at(1)+1); aBoard.drawImage(imageName, 0-0.5,height-0.5, width, height, -1, alpha ); } #endif if(vm.count("FreemanChain")){ string fileName = vm["FreemanChain"].as<string>(); vector< FreemanChain<int> > vectFc = PointListReader< Z2i::Point>:: getFreemanChainsFromFile<int> (fileName); aBoard << SetMode( vectFc.at(0).styleName(), "InterGrid" ); aBoard << CustomStyle( vectFc.at(0).styleName(), new CustomColors( DGtalBoard::Color::Red , DGtalBoard::Color::None ) ); for(unsigned int i=0; i<vectFc.size(); i++){ aBoard << vectFc.at(i) ; } } if(vm.count("SDP") || vm.count("SFP")){ bool drawPoints= vm.count("drawContourPoint"); bool invertYaxis = vm.count("invertYaxis"); double pointSize=1.0; if(drawPoints){ pointSize = vm["drawContourPoint"].as<double>(); } vector<LibBoard::Point> contourPt; if(vm.count("SDP")){ string fileName = vm["SDP"].as<string>(); vector< Z2i::Point > contour = PointListReader< Z2i::Point >::getPointsFromFile(fileName); for(unsigned int j=0; j<contour.size(); j++){ LibBoard::Point pt((double)(contour.at(j)[0]), (invertYaxis? (double)(-contour.at(j)[1]+contour.at(0)[1]):(double)(contour.at(j)[1]))); contourPt.push_back(pt); if(drawPoints){ aBoard.fillCircle(pt.x, pt.y, pointSize); } } } if(vm.count("SFP")){ string fileName = vm["SFP"].as<string>(); vector< RealPointVector<2> > contour = PointListReader< RealPointVector<2> >::getPointsFromFile(fileName); for(unsigned int j=0; j<contour.size(); j++){ LibBoard::Point pt((double)(contour.at(j)[0]), (invertYaxis? (double)(-contour.at(j)[1]+contour.at(0)[1]):(double)(contour.at(j)[1]))); contourPt.push_back(pt); if(drawPoints){ aBoard.fillCircle(pt.x, pt.y, pointSize); } } } aBoard.setPenColor(DGtalBoard::Color::Red); aBoard.setLineStyle (LibBoard::Shape::SolidStyle ); aBoard.setLineWidth (lineWidth); aBoard.drawPolyline(contourPt); } string outputFileName= "output.eps"; if (vm.count("outputSVG")){ string outputFileName= vm["outputSVG"].as<string>(); aBoard.saveSVG(outputFileName.c_str()); } if (vm.count("outputFIG")){ string outputFileName= vm["outputFIG"].as<string>(); aBoard.saveFIG(outputFileName.c_str()); } #ifndef WITH_CAIRO if (vm.count("outputEPS")){ string outputFileName= vm["outputEPS"].as<string>(); aBoard.saveEPS(outputFileName.c_str()); } #endif #ifdef WITH_CAIRO if (vm.count("outputEPS")){ string outputFileName= vm["outputEPS"].as<string>(); aBoard.saveCairo(outputFileName.c_str(),DGtalBoard::CairoEPS ); } if (vm.count("outputPDF")){ string outputFileName= vm["outputPDF"].as<string>(); aBoard.saveCairo(outputFileName.c_str(),DGtalBoard::CairoPDF ); } if (vm.count("outputPNG")){ string outputFileName= vm["outputPNG"].as<string>(); aBoard.saveCairo(outputFileName.c_str(),DGtalBoard::CairoPNG ); } #endif }