// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void ReadH5Ebsd::copyHEDMArrays(H5EbsdVolumeReader* ebsdReader)
{
  float* f1 = NULL;
  float* f2 = NULL;
  float* f3 = NULL;
  int* phasePtr = NULL;

  FloatArrayType::Pointer fArray = FloatArrayType::NullPointer();
  Int32ArrayType::Pointer iArray = Int32ArrayType::NullPointer();
  VoxelDataContainer* m = getVoxelDataContainer();
  int64_t totalPoints = m->getTotalPoints();


  if (m_SelectedVoxelCellArrays.find(m_CellEulerAnglesArrayName) != m_SelectedVoxelCellArrays.end() )
  {
    //  radianconversion = M_PI / 180.0;
    f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Euler1));
    f2 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Euler2));
    f3 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Euler3));
    fArray = FloatArrayType::CreateArray(totalPoints * 3, DREAM3D::CellData::EulerAngles);
    fArray->SetNumberOfComponents(3);
    float* cellEulerAngles = fArray->GetPointer(0);
    for (int64_t i = 0; i < totalPoints; i++)
    {
      cellEulerAngles[3 * i] = f1[i];
      cellEulerAngles[3 * i + 1] = f2[i];
      cellEulerAngles[3 * i + 2] = f3[i];
    }
    m->addCellData(DREAM3D::CellData::EulerAngles, fArray);
  }

  if (m_SelectedVoxelCellArrays.find(m_CellPhasesArrayName) != m_SelectedVoxelCellArrays.end() )
  {
    phasePtr = reinterpret_cast<int*>(ebsdReader->getPointerByName(Ebsd::Mic::Phase));
    iArray = Int32ArrayType::CreateArray(totalPoints, DREAM3D::CellData::Phases);
    iArray->SetNumberOfComponents(1);
    ::memcpy(iArray->GetPointer(0), phasePtr, sizeof(int32_t) * totalPoints);
    m->addCellData(DREAM3D::CellData::Phases, iArray);
  }

  if (m_SelectedVoxelCellArrays.find(Ebsd::Mic::Confidence) != m_SelectedVoxelCellArrays.end() )
  {
    f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Confidence));
    fArray = FloatArrayType::CreateArray(totalPoints, Ebsd::Mic::Confidence);
    fArray->SetNumberOfComponents(1);
    ::memcpy(fArray->GetPointer(0), f1, sizeof(float) * totalPoints);
    m->addCellData(Ebsd::Mic::Confidence, fArray);
  }
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void ReadH5Ebsd::copyTSLArrays(H5EbsdVolumeReader* ebsdReader)
{
  float* f1 = NULL;
  float* f2 = NULL;
  float* f3 = NULL;
  int* phasePtr = NULL;

  FloatArrayType::Pointer fArray = FloatArrayType::NullPointer();
  Int32ArrayType::Pointer iArray = Int32ArrayType::NullPointer();
  VoxelDataContainer* m = getVoxelDataContainer();
  int64_t totalPoints = m->getTotalPoints();

  if (m_SelectedVoxelCellArrays.find(m_CellPhasesArrayName) != m_SelectedVoxelCellArrays.end() )
  {
    phasePtr = reinterpret_cast<int*>(ebsdReader->getPointerByName(Ebsd::Ang::PhaseData));
    iArray = Int32ArrayType::CreateArray(totalPoints, DREAM3D::CellData::Phases);
    iArray->SetNumberOfComponents(1);
    ::memcpy(iArray->GetPointer(0), phasePtr, sizeof(int32_t) * totalPoints);
    m->addCellData(DREAM3D::CellData::Phases, iArray);
  }

  if (m_SelectedVoxelCellArrays.find(m_CellEulerAnglesArrayName) != m_SelectedVoxelCellArrays.end() )
  {
    f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Ang::Phi1));
    f2 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Ang::Phi));
    f3 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Ang::Phi2));
    fArray = FloatArrayType::CreateArray(totalPoints, 3, DREAM3D::CellData::EulerAngles);
    float* cellEulerAngles = fArray->GetPointer(0);

    for (int64_t i = 0; i < totalPoints; i++)
    {
      cellEulerAngles[3 * i] = f1[i];
      cellEulerAngles[3 * i + 1] = f2[i];
      cellEulerAngles[3 * i + 2] = f3[i];
    }
    m->addCellData(DREAM3D::CellData::EulerAngles, fArray);
  }

  if (m_SelectedVoxelCellArrays.find(Ebsd::Ang::ImageQuality) != m_SelectedVoxelCellArrays.end() )
  {
    f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Ang::ImageQuality));
    fArray = FloatArrayType::CreateArray(totalPoints, Ebsd::Ang::ImageQuality);
    ::memcpy(fArray->GetPointer(0), f1, sizeof(float) * totalPoints);
    m->addCellData(Ebsd::Ang::ImageQuality, fArray);
  }

  if (m_SelectedVoxelCellArrays.find(Ebsd::Ang::ConfidenceIndex) != m_SelectedVoxelCellArrays.end() )
  {
    f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Ang::ConfidenceIndex));
    fArray = FloatArrayType::CreateArray(totalPoints, Ebsd::Ang::ConfidenceIndex);
    ::memcpy(fArray->GetPointer(0), f1, sizeof(float) * totalPoints);
    m->addCellData(Ebsd::Ang::ConfidenceIndex, fArray);
  }

  if (m_SelectedVoxelCellArrays.find(Ebsd::Ang::SEMSignal) != m_SelectedVoxelCellArrays.end() )
  {
    f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Ang::SEMSignal));
    fArray = FloatArrayType::CreateArray(totalPoints, Ebsd::Ang::SEMSignal);
    ::memcpy(fArray->GetPointer(0), f1, sizeof(float) * totalPoints);
    m->addCellData(Ebsd::Ang::SEMSignal, fArray);
  }

  if (m_SelectedVoxelCellArrays.find(Ebsd::Ang::Fit) != m_SelectedVoxelCellArrays.end() )
  {
    f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Ang::Fit));
    fArray = FloatArrayType::CreateArray(totalPoints, Ebsd::Ang::Fit);
    ::memcpy(fArray->GetPointer(0), f1, sizeof(float) * totalPoints);
    m->addCellData(Ebsd::Ang::Fit, fArray);
  }
}