PetscErrorCode MatDestroy_SuperLU_DIST(Mat A)
{
PetscErrorCode ierr;
Mat_SuperLU_DIST *lu = (Mat_SuperLU_DIST*)A->spptr;
PetscBool flg;
PetscFunctionBegin;
if (lu && lu->CleanUpSuperLU_Dist) {
/* Deallocate SuperLU_DIST storage */
if (lu->MatInputMode == GLOBAL) {
Destroy_CompCol_Matrix_dist(&lu->A_sup);
} else {
Destroy_CompRowLoc_Matrix_dist(&lu->A_sup);
if ( lu->options.SolveInitialized ) {
#if defined(PETSC_USE_COMPLEX)
zSolveFinalize(&lu->options, &lu->SOLVEstruct);
#else
dSolveFinalize(&lu->options, &lu->SOLVEstruct);
#endif
}
}
Destroy_LU(A->cmap->N, &lu->grid, &lu->LUstruct);
ScalePermstructFree(&lu->ScalePermstruct);
LUstructFree(&lu->LUstruct);
/* Release the SuperLU_DIST process grid. */
superlu_gridexit(&lu->grid);
ierr = MPI_Comm_free(&(lu->comm_superlu));CHKERRQ(ierr);
}
ierr = PetscFree(A->spptr);CHKERRQ(ierr);
ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&flg);CHKERRQ(ierr);
if (flg) {
ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr);
} else {
ierr = MatDestroy_MPIAIJ(A);CHKERRQ(ierr);
}
PetscFunctionReturn(0);
}
int main(int argc, char *argv[])
{
superlu_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
NRformat_loc *Astore;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
SOLVEstruct_t SOLVEstruct;
gridinfo_t grid;
double *berr;
double *b, *b1, *xtrue, *nzval, *nzval1;
int_t *colind, *colind1, *rowptr, *rowptr1;
int_t i, j, m, n, nnz_loc, m_loc, fst_row;
int nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char **cpp, c;
FILE *fp, *fopen();
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol ) goto out;
if ( !iam ) {
printf("Input matrix file: %s\n", *cpp);
printf("\tProcess grid\t%d X %d\n", grid.nprow, grid.npcol);
}
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
dcreate_matrix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, &grid);
if ( !(b1 = doubleMalloc_dist(ldb * nrhs)) )
ABORT("Malloc fails for b1[]");
for (j = 0; j < nrhs; ++j)
for (i = 0; i < ldb; ++i) b1[i+j*ldb] = b[i+j*ldb];
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
m = A.nrow;
n = A.ncol;
/* Save a copy of the matrix A. */
Astore = (NRformat_loc *) A.Store;
nnz_loc = Astore->nnz_loc;
m_loc = Astore->m_loc;
fst_row = Astore->fst_row;
nzval = Astore->nzval;
colind = Astore->colind;
rowptr = Astore->rowptr;
nzval1 = doubleMalloc_dist(nnz_loc);
colind1 = intMalloc_dist(nnz_loc);
rowptr1 = intMalloc_dist(m_loc+1);
for (i = 0; i < nnz_loc; ++i) {
nzval1[i] = nzval[i];
colind1[i] = colind[i];
}
for (i = 0; i < m_loc+1; ++i) rowptr1[i] = rowptr[i];
/* ------------------------------------------------------------
WE SOLVE THE LINEAR SYSTEM FOR THE FIRST TIME.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver: factorize and solve. */
pdgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
pdinf_norm_error(iam, m_loc, nrhs, b, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A); /* Deallocate storage of matrix A. */
SUPERLU_FREE(b); /* Free storage of right-hand side. */
/* ------------------------------------------------------------
NOW WE SOLVE ANOTHER LINEAR SYSTEM.
THE MATRIX A HAS THE SAME SPARSITY PATTERN AND THE SIMILAR
NUMERICAL VALUES AS THAT IN A PREVIOUS SYSTEM.
------------------------------------------------------------*/
options.Fact = SamePattern_SameRowPerm;
PStatInit(&stat); /* Initialize the statistics variables. */
/* Set up the local A in NR_loc format */
dCreate_CompRowLoc_Matrix_dist(&A, m, n, nnz_loc, m_loc, fst_row,
nzval1, colind1, rowptr1,
SLU_NR_loc, SLU_D, SLU_GE);
/* Solve the linear system. */
pdgssvx(&options, &A, &ScalePermstruct, b1, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam )
printf("Solve a system with the same pattern and similar values.\n");
pdinf_norm_error(iam, m_loc, nrhs, b1, ldb, xtrue, ldx, &grid);
/* Print the statistics. */
PStatPrint(&options, &stat, &grid);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A); /* Deallocate storage of matrix A. */
Destroy_LU(n, &grid, &LUstruct); /* Deallocate storage associated with
the L and U matrices. */
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct); /* Deallocate the structure of L and U.*/
if ( options.SolveInitialized ) {
dSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b1); /* Free storage of right-hand side. */
SUPERLU_FREE(xtrue); /* Free storage of the exact solution. */
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
void f_Destroy_LU(int_t *n, fptr *grid, fptr *LUstruct)
{
Destroy_LU(*n, (gridinfo_t *) *grid, (LUstruct_t *) *LUstruct);
}
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
gridinfo_t grid1, grid2;
double *berr;
double *a, *b, *xtrue;
int_t *asub, *xa;
int_t i, j, m, n, nnz;
int_t nprow, npcol, ldumap, p;
int_t usermap[6];
int iam, info, ldb, ldx, nprocs;
int nrhs = 1; /* Number of right-hand side. */
char trans[1];
char **cpp, c;
FILE *fp, *fopen();
/* prototypes */
extern void LUstructInit(const int_t, LUstruct_t *);
extern void LUstructFree(LUstruct_t *);
extern void Destroy_LU(int_t, gridinfo_t *, LUstruct_t *);
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
MPI_Comm_size( MPI_COMM_WORLD, &nprocs );
if ( nprocs < 10 ) {
fprintf(stderr, "Requires at least 10 processes\n");
exit(-1);
}
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID 1.
------------------------------------------------------------*/
nprow = 2;
npcol = 3;
ldumap = 2;
p = 0; /* Grid 1 starts from process 0. */
for (i = 0; i < nprow; ++i)
for (j = 0; j < npcol; ++j) usermap[i+j*ldumap] = p++;
superlu_gridmap(MPI_COMM_WORLD, nprow, npcol, usermap, ldumap, &grid1);
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID 2.
------------------------------------------------------------*/
nprow = 2;
npcol = 2;
ldumap = 2;
p = 6; /* Grid 2 starts from process 6. */
for (i = 0; i < nprow; ++i)
for (j = 0; j < npcol; ++j) usermap[i+j*ldumap] = p++;
superlu_gridmap(MPI_COMM_WORLD, nprow, npcol, usermap, ldumap, &grid2);
/* Bail out if I do not belong in any of the 2 grids. */
MPI_Comm_rank( MPI_COMM_WORLD, &iam );
if ( iam >= 10 ) goto out;
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
if ( iam >= 0 && iam < 6 ) { /* I am in grid 1. */
iam = grid1.iam; /* Get the logical number in the new grid. */
/* ------------------------------------------------------------
PROCESS 0 READS THE MATRIX A, AND THEN BROADCASTS IT TO ALL
THE OTHER PROCESSES.
------------------------------------------------------------*/
if ( !iam ) {
/* Read the matrix stored on disk in Harwell-Boeing format. */
dreadhb_dist(iam, fp, &m, &n, &nnz, &a, &asub, &xa);
printf("\tDimension\t%dx%d\t # nonzeros %d\n", m, n, nnz);
printf("\tProcess grid\t%d X %d\n", (int) grid1.nprow, (int) grid1.npcol);
/* Broadcast matrix A to the other PEs. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid1.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid1.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid1.comm );
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid1.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid1.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid1.comm );
} else {
/* Receive matrix A from PE 0. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid1.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid1.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid1.comm );
/* Allocate storage for compressed column representation. */
dallocateA_dist(n, nnz, &a, &asub, &xa);
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid1.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid1.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid1.comm );
}
/* Create compressed column matrix for A. */
dCreate_CompCol_Matrix_dist(&A, m, n, nnz, a, asub, xa,
SLU_NC, SLU_D, SLU_GE);
/* Generate the exact solution and compute the right-hand side. */
if (!(b=doubleMalloc_dist(m*nrhs))) ABORT("Malloc fails for b[]");
if (!(xtrue=doubleMalloc_dist(n*nrhs))) ABORT("Malloc fails for xtrue[]");
*trans = 'N';
ldx = n;
ldb = m;
dGenXtrue_dist(n, nrhs, xtrue, ldx);
dFillRHS_dist(trans, nrhs, xtrue, ldx, &A, b, ldb);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver: factorize and solve. */
pdgssvx_ABglobal(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid1,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
dinf_norm_error_dist(n, nrhs, b, ldb, xtrue, ldx, &grid1);
}
/* Print the statistics. */
PStatPrint(&options, &stat, &grid1);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A);
Destroy_LU(n, &grid1, &LUstruct);
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct);
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
} else { /* I am in grid 2. */
iam = grid2.iam; /* Get the logical number in the new grid. */
/* ------------------------------------------------------------
PROCESS 0 READS THE MATRIX A, AND THEN BROADCASTS IT TO ALL
THE OTHER PROCESSES.
------------------------------------------------------------*/
if ( !iam ) {
/* Read the matrix stored on disk in Harwell-Boeing format. */
dreadhb_dist(iam, fp, &m, &n, &nnz, &a, &asub, &xa);
printf("\tDimension\t%dx%d\t # nonzeros %d\n", m, n, nnz);
printf("\tProcess grid\t%d X %d\n", (int) grid2.nprow, (int) grid2.npcol);
/* Broadcast matrix A to the other PEs. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid2.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid2.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid2.comm );
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid2.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid2.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid2.comm );
} else {
/* Receive matrix A from PE 0. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid2.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid2.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid2.comm );
/* Allocate storage for compressed column representation. */
dallocateA_dist(n, nnz, &a, &asub, &xa);
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid2.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid2.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid2.comm );
}
/* Create compressed column matrix for A. */
dCreate_CompCol_Matrix_dist(&A, m, n, nnz, a, asub, xa,
SLU_NC, SLU_D, SLU_GE);
/* Generate the exact solution and compute the right-hand side. */
if (!(b=doubleMalloc_dist(m*nrhs))) ABORT("Malloc fails for b[]");
if (!(xtrue=doubleMalloc_dist(n*nrhs))) ABORT("Malloc fails for xtrue[]");
*trans = 'N';
ldx = n;
ldb = m;
dGenXtrue_dist(n, nrhs, xtrue, ldx);
dFillRHS_dist(trans, nrhs, xtrue, ldx, &A, b, ldb);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = MMD_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver: factorize and solve. */
pdgssvx_ABglobal(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid2,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
dinf_norm_error_dist(n, nrhs, b, ldb, xtrue, ldx, &grid2);
}
/* Print the statistics. */
PStatPrint(&options, &stat, &grid2);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A);
Destroy_LU(n, &grid2, &LUstruct);
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct);
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
}
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRIDS.
------------------------------------------------------------*/
superlu_gridexit(&grid1);
superlu_gridexit(&grid2);
out:
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int
c_fortran_pdgssvx_ABglobal_(int *iopt, int_t *n, int_t *nnz, int *nrhs,
double *values, int_t *rowind, int_t *colptr,
double *b, int *ldb, int grid_handle[HANDLE_SIZE],
double *berr, int factors[HANDLE_SIZE], int *info)
{
/*
* Purpose
* =======
*
* This is a Fortran wrapper to use pdgssvx_ABglobal().
*
* Arguments
* =========
*
* iopt (input) int
* Specifies the operation to be performed:
* = 1, performs LU decomposition for the first time
* = 2, performs a subsequent LU decomposition for a new matrix
* with the same sparsity pattern
* = 3, performs triangular solve
* = 4, frees all the storage in the end
*
* n (input) int, order of the matrix A
*
* nnz (input) int, number of nonzeros in matrix A
*
* nrhs (input) int, number of right-hand sides in the system AX = B
*
* values/rowind/colptr (input) column compressed data structure for A
*
* b (input/output) double
* On input, the right-hand side matrix of dimension (ldb, nrhs)
* On output, the solution matrix
*
* ldb (input) int, leading dimension of the matrix B
*
* grid_handle (input) int array of size 8, holds a pointer to the process
* grid structure, which is created and freed separately.
*
* berr (output) double, the backward error of each right-hand side
*
* factors (input/output) int array of size 8
* If iopt == 1, it is an output and contains the pointer pointing to
* the structure of the factored matrices.
* Otherwise, it it an input.
*
* info (output) int
*
*/
superlu_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t *ScalePermstruct;
LUstruct_t *LUstruct;
int_t nprow, npcol;
int iam;
int report;
int i;
gridinfo_t *grid;
factors_dist_t *LUfactors;
/*
* Set option for printing statistics.
* report = 0: no reporting
* report = 1: reporting
*/
report = 0;
/* Locate the process grid. */
grid = (gridinfo_t *) grid_handle[0];
iam = (*grid).iam;
nprow = (int_t) grid->nprow;
npcol = (int_t) grid->npcol;
if ( *iopt == 1 ) { /* LU decomposition */
if ( !iam ) printf(".. Process grid: %d X %d\n", nprow, npcol);
/* Initialize the statistics variables. */
PStatInit(&stat);
dCreate_CompCol_Matrix_dist(&A, *n, *n, *nnz, values, rowind, colptr,
SLU_NC, SLU_D, SLU_GE);
/* Set options. */
set_default_options(&options);
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstruct =
(ScalePermstruct_t *) SUPERLU_MALLOC(sizeof(ScalePermstruct_t));
ScalePermstructInit(*n, *n, ScalePermstruct);
LUstruct = (LUstruct_t *) SUPERLU_MALLOC(sizeof(LUstruct_t));
LUstructInit(*n, *n, LUstruct);
/* Call global routine with nrhs=0 to perform the factorization. */
pdgssvx_ABglobal(&options, &A, ScalePermstruct, NULL, *ldb, 0,
grid, LUstruct, berr, &stat, info);
if ( *info == 0 ) {
if ( report == 1 ) PStatPrint(&options, &stat, grid);
} else {
printf("pdgssvx_ABglobal() error returns INFO= %d\n", *info);
}
/* Save the LU factors in the factors handle */
LUfactors = (factors_dist_t*) SUPERLU_MALLOC(sizeof(factors_dist_t));
LUfactors->ScalePermstruct = ScalePermstruct;
LUfactors->LUstruct = LUstruct;
factors[0] = (int) LUfactors;
/* Free un-wanted storage */
Destroy_SuperMatrix_Store_dist(&A);
PStatFree(&stat);
} else if ( *iopt == 2 ) {
/* Factor a modified matrix with the same sparsity pattern using
existing permutations and L U storage */
/* Extract the LU factors in the factors handle */
LUfactors = (factors_dist_t*) factors[0];
ScalePermstruct = LUfactors->ScalePermstruct;
LUstruct = LUfactors->LUstruct;
PStatInit(&stat);
/* Reset SuperMatrix pointers. */
dCreate_CompCol_Matrix_dist(&A, *n, *n, *nnz, values, rowind, colptr,
SLU_NC, SLU_D, SLU_GE);
/* Set options. */
set_default_options(&options);
options.Fact = SamePattern_SameRowPerm;
/* Call the routine with nrhs=0 to perform the factorization. */
pdgssvx_ABglobal(&options, &A, ScalePermstruct, NULL, *ldb, 0,
grid, LUstruct, berr, &stat, info);
if ( *info == 0 ) {
if ( report == 1 ) PStatPrint(&options, &stat, grid);
} else {
printf("pdgssvx_ABglobal() error returns INFO= %d\n", *info);
}
/* Free un-wanted storage */
Destroy_SuperMatrix_Store_dist(&A);
PStatFree(&stat);
} else if ( *iopt == 3 ) { /* Triangular solve */
/* Extract the LU factors in the factors handle */
LUfactors = (factors_dist_t*) factors[0];
ScalePermstruct = LUfactors->ScalePermstruct;
LUstruct = LUfactors->LUstruct;
PStatInit(&stat);
/* Reset SuperMatrix pointers. */
dCreate_CompCol_Matrix_dist(&A, *n, *n, *nnz, values, rowind, colptr,
SLU_NC, SLU_D, SLU_GE);
/* Set options. */
set_default_options(&options);
options.Fact = FACTORED;
/* Solve the system A*X=B, overwriting B with X. */
pdgssvx_ABglobal(&options, &A, ScalePermstruct, b, *ldb, *nrhs,
grid, LUstruct, berr, &stat, info);
/* Free un-wanted storage */
Destroy_SuperMatrix_Store_dist(&A);
PStatFree(&stat);
} else if ( *iopt == 4 ) { /* Free storage */
/* Free the LU factors in the factors handle */
LUfactors = (factors_dist_t*) factors[0];
Destroy_LU(*n, grid, LUfactors->LUstruct);
LUstructFree(LUfactors->LUstruct);
ScalePermstructFree(LUfactors->ScalePermstruct);
SUPERLU_FREE(LUfactors->ScalePermstruct);
SUPERLU_FREE(LUfactors->LUstruct);
SUPERLU_FREE(LUfactors);
} else {
fprintf(stderr, "Invalid iopt=%d passed to c_fortran_pdgssvx_ABglobal()\n", *iopt);
exit(-1);
}
}
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
gridinfo_t grid;
double *berr;
doublecomplex *a, *b, *xtrue;
int_t *asub, *xa;
int_t m, n, nnz;
int_t nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char trans[1];
char **cpp, c;
FILE *fp, *fopen();
extern int cpp_defs();
/* prototypes */
extern void LUstructInit(const int_t, LUstruct_t *);
extern void LUstructFree(LUstruct_t *);
extern void Destroy_LU(int_t, gridinfo_t *, LUstruct_t *);
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default " IFMT ")\n", nprow);
printf("\t-c <int>: process columns (default " IFMT ")\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol )
goto out;
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
PROCESS 0 READS THE MATRIX A, AND THEN BROADCASTS IT TO ALL
THE OTHER PROCESSES.
------------------------------------------------------------*/
if ( !iam ) {
/* Print the CPP definitions. */
cpp_defs();
/* Read the matrix stored on disk in Harwell-Boeing format. */
zreadhb_dist(iam, fp, &m, &n, &nnz, &a, &asub, &xa);
printf("Input matrix file: %s\n", *cpp);
printf("\tDimension\t" IFMT "x" IFMT "\t # nonzeros " IFMT "\n", m, n, nnz);
printf("\tProcess grid\t%d X %d\n", (int) grid.nprow, (int) grid.npcol);
/* Broadcast matrix A to the other PEs. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( a, nnz, SuperLU_MPI_DOUBLE_COMPLEX, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
} else {
/* Receive matrix A from PE 0. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
/* Allocate storage for compressed column representation. */
zallocateA_dist(n, nnz, &a, &asub, &xa);
MPI_Bcast( a, nnz, SuperLU_MPI_DOUBLE_COMPLEX, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
}
/* Create compressed column matrix for A. */
zCreate_CompCol_Matrix_dist(&A, m, n, nnz, a, asub, xa,
SLU_NC, SLU_Z, SLU_GE);
/* Generate the exact solution and compute the right-hand side. */
if (!(b=doublecomplexMalloc_dist(m*nrhs))) ABORT("Malloc fails for b[]");
if (!(xtrue=doublecomplexMalloc_dist(n*nrhs))) ABORT("Malloc fails for xtrue[]");
*trans = 'N';
ldx = n;
ldb = m;
zGenXtrue_dist(n, nrhs, xtrue, ldx);
zFillRHS_dist(trans, nrhs, xtrue, ldx, &A, b, ldb);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag_MC64;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pzgssvx_ABglobal(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
zinf_norm_error_dist(n, nrhs, b, ldb, xtrue, ldx, &grid);
}
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A);
Destroy_LU(n, &grid, &LUstruct);
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct);
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
gridinfo_t grid;
double *berr;
double *a, *a1, *b, *b1, *xtrue;
int_t *asub, *asub1, *xa, *xa1;
int_t i, j, m, n, nnz;
int_t nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char trans[1];
char **cpp, c;
FILE *fp, *fopen();
extern int cpp_defs();
/* prototypes */
extern void LUstructInit(const int_t, LUstruct_t *);
extern void LUstructFree(LUstruct_t *);
extern void Destroy_LU(int_t, gridinfo_t *, LUstruct_t *);
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol )
goto out;
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
Process 0 reads the matrix A, and then broadcasts it to all
the other processes.
------------------------------------------------------------*/
if ( !iam ) {
/* Print the CPP definitions. */
cpp_defs();
/* Read the matrix stored on disk in Harwell-Boeing format. */
dreadhb_dist(iam, fp, &m, &n, &nnz, &a, &asub, &xa);
printf("Input matrix file: %s\n", *cpp);
printf("\tDimension\t%dx%d\t # nonzeros %d\n", m, n, nnz);
printf("\tProcess grid\t%d X %d\n", (int) grid.nprow, (int) grid.npcol);
/* Broadcast matrix A to the other PEs. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
} else {
/* Receive matrix A from PE 0. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
/* Allocate storage for compressed column representation. */
dallocateA_dist(n, nnz, &a, &asub, &xa);
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
}
/* Create compressed column matrix for A. */
dCreate_CompCol_Matrix_dist(&A, m, n, nnz, a, asub, xa,
SLU_NC, SLU_D, SLU_GE);
/* Generate the exact solution and compute the right-hand side. */
if (!(b=doubleMalloc_dist(m * nrhs))) ABORT("Malloc fails for b[]");
if (!(xtrue=doubleMalloc_dist(n*nrhs))) ABORT("Malloc fails for xtrue[]");
*trans = 'N';
ldx = n;
ldb = m;
dGenXtrue_dist(n, nrhs, xtrue, ldx);
dFillRHS_dist(trans, nrhs, xtrue, ldx, &A, b, ldb);
/* Save a copy of the right-hand side. */
if ( !(b1 = doubleMalloc_dist(m * nrhs)) ) ABORT("Malloc fails for b1[]");
for (j = 0; j < nrhs; ++j)
for (i = 0; i < m; ++i) b1[i+j*ldb] = b[i+j*ldb];
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* Save a copy of the matrix A. */
dallocateA_dist(n, nnz, &a1, &asub1, &xa1);
for (i = 0; i < nnz; ++i) { a1[i] = a[i]; asub1[i] = asub[i]; }
for (i = 0; i < n+1; ++i) xa1[i] = xa[i];
/* ------------------------------------------------------------
WE SOLVE THE LINEAR SYSTEM FOR THE FIRST TIME.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver: factorize and solve. */
pdgssvx_ABglobal(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
dinf_norm_error_dist(n, nrhs, b, ldb, xtrue, ldx, &grid);
}
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A); /* Deallocate storage of matrix A. */
Destroy_LU(n, &grid, &LUstruct); /* Deallocate storage associated with
the L and U matrices. */
SUPERLU_FREE(b); /* Free storage of right-hand side. */
/* ------------------------------------------------------------
NOW WE SOLVE ANOTHER LINEAR SYSTEM.
ONLY THE SPARSITY PATTERN OF MATRIX A IS THE SAME.
------------------------------------------------------------*/
options.Fact = SamePattern;
PStatInit(&stat); /* Initialize the statistics variables. */
/* Create compressed column matrix for A. */
dCreate_CompCol_Matrix_dist(&A, m, n, nnz, a1, asub1, xa1,
SLU_NC, SLU_D, SLU_GE);
/* Solve the linear system. */
pdgssvx_ABglobal(&options, &A, &ScalePermstruct, b1, ldb, nrhs, &grid,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
printf("Solve the system with the same sparsity pattern.\n");
dinf_norm_error_dist(n, nrhs, b1, ldb, xtrue, ldx, &grid);
}
/* Print the statistics. */
PStatPrint(&options, &stat, &grid);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A); /* Deallocate storage of matrix A. */
Destroy_LU(n, &grid, &LUstruct); /* Deallocate storage associated with
the L and U matrices. */
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct); /* Deallocate the structure of L and U.*/
SUPERLU_FREE(b1); /* Free storage of right-hand side. */
SUPERLU_FREE(xtrue); /* Free storage of the exact solution. */
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
SOLVEstruct_t SOLVEstruct;
gridinfo_t grid1, grid2;
double *berr;
double *a, *b, *xtrue;
int_t *asub, *xa;
int_t i, j, m, n;
int nprow, npcol, ldumap, p;
int_t usermap[6];
int iam, info, ldb, ldx, nprocs;
int nrhs = 1; /* Number of right-hand side. */
char **cpp, c;
FILE *fp, *fopen();
int cpp_defs();
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
MPI_Comm_size( MPI_COMM_WORLD, &nprocs );
if ( nprocs < 10 ) {
fprintf(stderr, "Requires at least 10 processes\n");
exit(-1);
}
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID 1.
------------------------------------------------------------*/
nprow = 2;
npcol = 3;
ldumap = 2;
p = 0; /* Grid 1 starts from process 0. */
for (i = 0; i < nprow; ++i)
for (j = 0; j < npcol; ++j) usermap[i+j*ldumap] = p++;
superlu_gridmap(MPI_COMM_WORLD, nprow, npcol, usermap, ldumap, &grid1);
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID 2.
------------------------------------------------------------*/
nprow = 2;
npcol = 2;
ldumap = 2;
p = 6; /* Grid 2 starts from process 6. */
for (i = 0; i < nprow; ++i)
for (j = 0; j < npcol; ++j) usermap[i+j*ldumap] = p++;
superlu_gridmap(MPI_COMM_WORLD, nprow, npcol, usermap, ldumap, &grid2);
/* Bail out if I do not belong in any of the 2 grids. */
MPI_Comm_rank( MPI_COMM_WORLD, &iam );
if ( iam >= 10 ) goto out;
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
if ( iam >= 0 && iam < 6 ) { /* I am in grid 1. */
iam = grid1.iam; /* Get the logical number in the new grid. */
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
dcreate_matrix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, &grid1);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = NO;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
m = A.nrow;
n = A.ncol;
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pdgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid1,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
pdinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b, ldb, xtrue, ldx, &grid1);
/* Print the statistics. */
PStatPrint(&options, &stat, &grid1);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A);
ScalePermstructFree(&ScalePermstruct);
Destroy_LU(n, &grid1, &LUstruct);
LUstructFree(&LUstruct);
if ( options.SolveInitialized ) {
dSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
} else { /* I am in grid 2. */
iam = grid2.iam; /* Get the logical number in the new grid. */
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
dcreate_matrix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, &grid2);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = MMD_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
m = A.nrow;
n = A.ncol;
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pdgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid2,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
pdinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b, ldb, xtrue, ldx, &grid2);
/* Print the statistics. */
PStatPrint(&options, &stat, &grid2);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A);
ScalePermstructFree(&ScalePermstruct);
Destroy_LU(n, &grid2, &LUstruct);
LUstructFree(&LUstruct);
if ( options.SolveInitialized ) {
dSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
}
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRIDS.
------------------------------------------------------------*/
superlu_gridexit(&grid1);
superlu_gridexit(&grid2);
out:
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
PetscErrorCode MatLUFactorNumeric_SuperLU_DIST(Mat F,Mat A,const MatFactorInfo *info)
{
Mat *tseq,A_seq = NULL;
Mat_SeqAIJ *aa,*bb;
Mat_SuperLU_DIST *lu = (Mat_SuperLU_DIST*)(F)->spptr;
PetscErrorCode ierr;
PetscInt M=A->rmap->N,N=A->cmap->N,i,*ai,*aj,*bi,*bj,nz,rstart,*garray,
m=A->rmap->n, colA_start,j,jcol,jB,countA,countB,*bjj,*ajj;
int sinfo; /* SuperLU_Dist info flag is always an int even with long long indices */
PetscMPIInt size;
SuperLUStat_t stat;
double *berr=0;
IS isrow;
Mat F_diag=NULL;
#if defined(PETSC_USE_COMPLEX)
doublecomplex *av, *bv;
#else
double *av, *bv;
#endif
PetscFunctionBegin;
ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr);
if (lu->MatInputMode == GLOBAL) { /* global mat input */
if (size > 1) { /* convert mpi A to seq mat A */
ierr = ISCreateStride(PETSC_COMM_SELF,M,0,1,&isrow);CHKERRQ(ierr);
ierr = MatGetSubMatrices(A,1,&isrow,&isrow,MAT_INITIAL_MATRIX,&tseq);CHKERRQ(ierr);
ierr = ISDestroy(&isrow);CHKERRQ(ierr);
A_seq = *tseq;
ierr = PetscFree(tseq);CHKERRQ(ierr);
aa = (Mat_SeqAIJ*)A_seq->data;
} else {
PetscBool flg;
ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&flg);CHKERRQ(ierr);
if (flg) {
Mat_MPIAIJ *At = (Mat_MPIAIJ*)A->data;
A = At->A;
}
aa = (Mat_SeqAIJ*)A->data;
}
/* Convert Petsc NR matrix to SuperLU_DIST NC.
Note: memories of lu->val, col and row are allocated by CompRow_to_CompCol_dist()! */
if (lu->options.Fact != DOFACT) {/* successive numeric factorization, sparsity pattern is reused. */
PetscStackCall("SuperLU_DIST:Destroy_CompCol_Matrix_dist",Destroy_CompCol_Matrix_dist(&lu->A_sup));
if (lu->FactPattern == SamePattern_SameRowPerm) {
lu->options.Fact = SamePattern_SameRowPerm; /* matrix has similar numerical values */
} else { /* lu->FactPattern == SamePattern */
PetscStackCall("SuperLU_DIST:Destroy_LU",Destroy_LU(N, &lu->grid, &lu->LUstruct));
lu->options.Fact = SamePattern;
}
}
#if defined(PETSC_USE_COMPLEX)
PetscStackCall("SuperLU_DIST:zCompRow_to_CompCol_dist",zCompRow_to_CompCol_dist(M,N,aa->nz,(doublecomplex*)aa->a,(int_t*)aa->j,(int_t*)aa->i,&lu->val,&lu->col, &lu->row));
#else
PetscStackCall("SuperLU_DIST:dCompRow_to_CompCol_dist",dCompRow_to_CompCol_dist(M,N,aa->nz,aa->a,(int_t*)aa->j,(int_t*)aa->i,&lu->val, &lu->col, &lu->row));
#endif
/* Create compressed column matrix A_sup. */
#if defined(PETSC_USE_COMPLEX)
PetscStackCall("SuperLU_DIST:zCreate_CompCol_Matrix_dist",zCreate_CompCol_Matrix_dist(&lu->A_sup, M, N, aa->nz, lu->val, lu->col, lu->row, SLU_NC, SLU_Z, SLU_GE));
#else
PetscStackCall("SuperLU_DIST:dCreate_CompCol_Matrix_dist",dCreate_CompCol_Matrix_dist(&lu->A_sup, M, N, aa->nz, lu->val, lu->col, lu->row, SLU_NC, SLU_D, SLU_GE));
#endif
} else { /* distributed mat input */
Mat_MPIAIJ *mat = (Mat_MPIAIJ*)A->data;
aa=(Mat_SeqAIJ*)(mat->A)->data;
bb=(Mat_SeqAIJ*)(mat->B)->data;
ai=aa->i; aj=aa->j;
bi=bb->i; bj=bb->j;
#if defined(PETSC_USE_COMPLEX)
av=(doublecomplex*)aa->a;
bv=(doublecomplex*)bb->a;
#else
av=aa->a;
bv=bb->a;
#endif
rstart = A->rmap->rstart;
nz = aa->nz + bb->nz;
garray = mat->garray;
if (lu->options.Fact == DOFACT) { /* first numeric factorization */
#if defined(PETSC_USE_COMPLEX)
PetscStackCall("SuperLU_DIST:zallocateA_dist",zallocateA_dist(m, nz, &lu->val, &lu->col, &lu->row));
#else
PetscStackCall("SuperLU_DIST:dallocateA_dist",dallocateA_dist(m, nz, &lu->val, &lu->col, &lu->row));
#endif
} else { /* successive numeric factorization, sparsity pattern and perm_c are reused. */
/* Destroy_CompRowLoc_Matrix_dist(&lu->A_sup); */ /* this leads to crash! However, see SuperLU_DIST_2.5/EXAMPLE/pzdrive2.c */
if (lu->FactPattern == SamePattern_SameRowPerm) {
lu->options.Fact = SamePattern_SameRowPerm; /* matrix has similar numerical values */
} else {
PetscStackCall("SuperLU_DIST:Destroy_LU",Destroy_LU(N, &lu->grid, &lu->LUstruct)); /* Deallocate storage associated with the L and U matrices. */
lu->options.Fact = SamePattern;
}
}
nz = 0;
for (i=0; i<m; i++) {
lu->row[i] = nz;
countA = ai[i+1] - ai[i];
countB = bi[i+1] - bi[i];
ajj = aj + ai[i]; /* ptr to the beginning of this row */
bjj = bj + bi[i];
/* B part, smaller col index */
colA_start = rstart + ajj[0]; /* the smallest global col index of A */
jB = 0;
for (j=0; j<countB; j++) {
jcol = garray[bjj[j]];
if (jcol > colA_start) {
jB = j;
break;
}
lu->col[nz] = jcol;
lu->val[nz++] = *bv++;
if (j==countB-1) jB = countB;
}
/* A part */
for (j=0; j<countA; j++) {
lu->col[nz] = rstart + ajj[j];
lu->val[nz++] = *av++;
}
/* B part, larger col index */
for (j=jB; j<countB; j++) {
lu->col[nz] = garray[bjj[j]];
lu->val[nz++] = *bv++;
}
}
lu->row[m] = nz;
#if defined(PETSC_USE_COMPLEX)
PetscStackCall("SuperLU_DIST:zCreate_CompRowLoc_Matrix_dist",zCreate_CompRowLoc_Matrix_dist(&lu->A_sup, M, N, nz, m, rstart,lu->val, lu->col, lu->row, SLU_NR_loc, SLU_Z, SLU_GE));
#else
PetscStackCall("SuperLU_DIST:dCreate_CompRowLoc_Matrix_dist",dCreate_CompRowLoc_Matrix_dist(&lu->A_sup, M, N, nz, m, rstart,lu->val, lu->col, lu->row, SLU_NR_loc, SLU_D, SLU_GE));
#endif
}
/* Factor the matrix. */
PetscStackCall("SuperLU_DIST:PStatInit",PStatInit(&stat)); /* Initialize the statistics variables. */
if (lu->MatInputMode == GLOBAL) { /* global mat input */
#if defined(PETSC_USE_COMPLEX)
PetscStackCall("SuperLU_DIST:pzgssvx_ABglobal",pzgssvx_ABglobal(&lu->options, &lu->A_sup, &lu->ScalePermstruct, 0, M, 0,&lu->grid, &lu->LUstruct, berr, &stat, &sinfo));
#else
PetscStackCall("SuperLU_DIST:pdgssvx_ABglobal",pdgssvx_ABglobal(&lu->options, &lu->A_sup, &lu->ScalePermstruct, 0, M, 0,&lu->grid, &lu->LUstruct, berr, &stat, &sinfo));
#endif
} else { /* distributed mat input */
#if defined(PETSC_USE_COMPLEX)
PetscStackCall("SuperLU_DIST:pzgssvx",pzgssvx(&lu->options, &lu->A_sup, &lu->ScalePermstruct, 0, m, 0, &lu->grid,&lu->LUstruct, &lu->SOLVEstruct, berr, &stat, &sinfo));
if (sinfo) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"pzgssvx fails, info: %d\n",sinfo);
#else
PetscStackCall("SuperLU_DIST:pdgssvx",pdgssvx(&lu->options, &lu->A_sup, &lu->ScalePermstruct, 0, m, 0, &lu->grid,&lu->LUstruct, &lu->SOLVEstruct, berr, &stat, &sinfo));
if (sinfo) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"pdgssvx fails, info: %d\n",sinfo);
#endif
}
if (lu->MatInputMode == GLOBAL && size > 1) {
ierr = MatDestroy(&A_seq);CHKERRQ(ierr);
}
if (lu->options.PrintStat) {
PStatPrint(&lu->options, &stat, &lu->grid); /* Print the statistics. */
}
PStatFree(&stat);
if (size > 1) {
F_diag = ((Mat_MPIAIJ*)(F)->data)->A;
F_diag->assembled = PETSC_TRUE;
}
(F)->assembled = PETSC_TRUE;
(F)->preallocated = PETSC_TRUE;
lu->options.Fact = FACTORED; /* The factored form of A is supplied. Local option used by this func. only */
PetscFunctionReturn(0);
}
/*! \brief
*
* <pre>
* Purpose
* =======
*
* The driver program PDDRIVE1.
*
* This example illustrates how to use PDGSSVX to
* solve systems with the same A but different right-hand side.
* In this case, we factorize A only once in the first call to
* PDGSSVX, and reuse the following data structures
* in the subsequent call to PDGSSVX:
* ScalePermstruct : DiagScale, R, C, perm_r, perm_c
* LUstruct : Glu_persist, Llu
*
* With MPICH, program may be run by typing:
* mpiexec -n <np> pddrive1 -r <proc rows> -c <proc columns> big.rua
* </pre>
*/
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
SOLVEstruct_t SOLVEstruct;
gridinfo_t grid;
double *berr;
double *b, *xtrue, *b1;
int i, j, m, n;
int nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char **cpp, c, *postfix;
int ii, omp_mpi_level;
FILE *fp, *fopen();
int cpp_defs();
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init_thread( &argc, &argv, MPI_THREAD_MULTIPLE, &omp_mpi_level);
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol ) goto out;
if ( !iam ) {
int v_major, v_minor, v_bugfix;
#ifdef __INTEL_COMPILER
printf("__INTEL_COMPILER is defined\n");
#endif
printf("__STDC_VERSION__ %ld\n", __STDC_VERSION__);
superlu_dist_GetVersionNumber(&v_major, &v_minor, &v_bugfix);
printf("Library version:\t%d.%d.%d\n", v_major, v_minor, v_bugfix);
printf("Input matrix file:\t%s\n", *cpp);
printf("Process grid:\t\t%d X %d\n", (int)grid.nprow, (int)grid.npcol);
fflush(stdout);
}
#if ( VAMPIR>=1 )
VT_traceoff();
#endif
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
for(ii = 0;ii<strlen(*cpp);ii++){
if((*cpp)[ii]=='.'){
postfix = &((*cpp)[ii+1]);
}
}
// printf("%s\n", postfix);
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
dcreate_matrix_postfix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, postfix, &grid);
if ( !(b1 = doubleMalloc_dist(ldb * nrhs)) )
ABORT("Malloc fails for b1[]");
for (j = 0; j < nrhs; ++j)
for (i = 0; i < ldb; ++i) b1[i+j*ldb] = b[i+j*ldb];
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
WE SOLVE THE LINEAR SYSTEM FOR THE FIRST TIME.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag_MC64;
options.ReplaceTinyPivot = NO;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
fflush(stdout);
}
m = A.nrow;
n = A.ncol;
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pdgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) printf("\tSolve the first system:\n");
pdinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
PStatFree(&stat);
/* ------------------------------------------------------------
NOW WE SOLVE ANOTHER SYSTEM WITH THE SAME A BUT DIFFERENT
RIGHT-HAND SIDE, WE WILL USE THE EXISTING L AND U FACTORS IN
LUSTRUCT OBTAINED FROM A PREVIOUS FATORIZATION.
------------------------------------------------------------*/
options.Fact = FACTORED; /* Indicate the factored form of A is supplied. */
PStatInit(&stat); /* Initialize the statistics variables. */
pdgssvx(&options, &A, &ScalePermstruct, b1, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) printf("\tSolve the system with a different B:\n");
pdinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b1, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A);
ScalePermstructFree(&ScalePermstruct);
Destroy_LU(n, &grid, &LUstruct);
LUstructFree(&LUstruct);
if ( options.SolveInitialized ) {
dSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b);
SUPERLU_FREE(b1);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int main(int argc, char *argv[])
{
superlu_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
SOLVEstruct_t SOLVEstruct;
gridinfo_t grid;
double *berr;
doublecomplex *b, *xtrue;
int_t m, n;
int_t nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char **cpp, c;
FILE *fp, *fopen();
extern int cpp_defs();
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol ) goto out;
if ( !iam ) printf("\tProcess grid\t%d X %d\n", grid.nprow, grid.npcol);
#if ( VAMPIR>=1 )
VT_traceoff();
#endif
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
zcreate_matrix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, &grid);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ParSymbFact = NO;
options.ColPerm = MMD_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.IterRefine = DOUBLE;
options.Trans = NOTRANS;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
#if 0
options.RowPerm = NOROWPERM;
options.IterRefine = NOREFINE;
options.ColPerm = NATURAL;
options.Equil = NO;
options.ReplaceTinyPivot = NO;
#endif
m = A.nrow;
n = A.ncol;
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(m, n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pzgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
pzinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A);
ScalePermstructFree(&ScalePermstruct);
Destroy_LU(n, &grid, &LUstruct);
LUstructFree(&LUstruct);
if ( options.SolveInitialized ) {
zSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int
DistributedSuperLU::setSize()
{
int n = theSOE->size;
//
// init the super lu process grid
//
if (gridInit == false) {
MPI_Comm comm_world; //
MPI_Group group_world; // group_worker;
comm_world = MPI_COMM_WORLD;
MPI_Comm_group(comm_world, &group_world);
// MPI_Group_excl(group_world, 1, 0, &group_worker); /* process 0 not member */
MPI_Comm_create(comm_world, group_world, &comm_SuperLU);
superlu_gridinit(comm_SuperLU, npRow, npCol, &grid);
// free old structures if resize already called
} else {
Destroy_LU(theSOE->size, &grid, &LUstruct);
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct);
}
//
// Initialize the statistics variables.
//
PStatInit(&stat);
//
// Create compressed column matrix for A.
//
if (n > 0) {
// create the SuperMatrix A
int nnz = theSOE->nnz;
rowA = new int[nnz];
for (int i=0; i<nnz; i++) rowA[i] = theSOE->rowA[i];
dCreate_CompCol_Matrix_dist(&A, n, n, nnz, theSOE->A,
rowA, theSOE->colStartA,
SLU_NC, SLU_D, SLU_GE);
//
// Initialize ScalePermstruct and LUstruct.
//
ScalePermstructInit(n, n, &ScalePermstruct);
LUstructInit(n, n, &LUstruct);
}
//
// set default options
//
set_default_options_dist(&options);
options.PrintStat=NO;
//
// Initialize the statistics variables.
//
PStatInit(&stat);
return 0;
}