int main(int argc,char **argv) { PetscErrorCode ierr; KSP ksp; PetscReal norm; DM da; Vec x,b,r; Mat A; ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr; ierr = KSPCreate(PETSC_COMM_WORLD,&ksp);CHKERRQ(ierr); ierr = DMDACreate3d(PETSC_COMM_WORLD,DM_BOUNDARY_NONE,DM_BOUNDARY_NONE,DM_BOUNDARY_NONE,DMDA_STENCIL_STAR,7,7,7,PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE,1,1,0,0,0,&da);CHKERRQ(ierr); ierr = DMSetFromOptions(da);CHKERRQ(ierr); ierr = DMSetUp(da);CHKERRQ(ierr); ierr = KSPSetDM(ksp,da);CHKERRQ(ierr); ierr = KSPSetComputeInitialGuess(ksp,ComputeInitialGuess,NULL);CHKERRQ(ierr); ierr = KSPSetComputeRHS(ksp,ComputeRHS,NULL);CHKERRQ(ierr); ierr = KSPSetComputeOperators(ksp,ComputeMatrix,NULL);CHKERRQ(ierr); ierr = DMDestroy(&da);CHKERRQ(ierr); ierr = KSPSetFromOptions(ksp);CHKERRQ(ierr); ierr = KSPSolve(ksp,NULL,NULL);CHKERRQ(ierr); ierr = KSPGetSolution(ksp,&x);CHKERRQ(ierr); ierr = KSPGetRhs(ksp,&b);CHKERRQ(ierr); ierr = VecDuplicate(b,&r);CHKERRQ(ierr); ierr = KSPGetOperators(ksp,&A,NULL);CHKERRQ(ierr); ierr = MatMult(A,x,r);CHKERRQ(ierr); ierr = VecAXPY(r,-1.0,b);CHKERRQ(ierr); ierr = VecNorm(r,NORM_2,&norm);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_WORLD,"Residual norm %g\n",(double)norm);CHKERRQ(ierr); ierr = VecDestroy(&r);CHKERRQ(ierr); ierr = KSPDestroy(&ksp);CHKERRQ(ierr); ierr = PetscFinalize(); return ierr; }
PetscErrorCode efs_setup(efs *slv, int offset[], int stride[]) { PetscErrorCode ierr; PetscInt xs, ys, zs, xm, ym, zm; PCType pc_type; if (efs_log(slv, EFS_LOG_STATUS)) { ierr = ef_io_print(slv->comm, "Setting up electric field solver");CHKERRQ(ierr); } slv->ts = 0; if (efs_log(slv, EFS_LOG_RESIDUAL)) { ierr = PetscOptionsSetValue("-ksp_monitor_short", NULL);CHKERRQ(ierr); } ierr = DMDASetFieldName(slv->dm, 0,"potential");CHKERRQ(ierr); if (slv->grid.nd == 2) { ierr = DMDAGetCorners(slv->dm, &xs, &ys, 0, &xm, &ym, 0);CHKERRQ(ierr); slv->dmap = ef_dmap_create_2d(xs - offset[0], ys - offset[1], xm, ym, stride); } else if (slv->grid.nd == 3) { ierr = DMDAGetCorners(slv->dm, &xs, &ys, &zs, &xm, &ym, &zm);CHKERRQ(ierr); slv->dmap = ef_dmap_create_3d(xs - offset[0], ys - offset[1], zs - offset[2], xm, ym, zm, stride); } else { SETERRQ1(PETSC_COMM_WORLD, PETSC_ERR_SUP, "Unsupported dimmension: %d", slv->grid.nd); } ierr = ef_callback_create(&slv->callback);CHKERRQ(ierr); ierr = KSPCreate(slv->comm, &slv->ksp);CHKERRQ(ierr); if (efs_log(slv, EFS_LOG_EIGS)) { ierr = KSPSetComputeEigenvalues(slv->ksp, PETSC_TRUE);CHKERRQ(ierr); } ierr = KSPSetDM(slv->ksp, slv->dm);CHKERRQ(ierr); ierr = KSPGetPC(slv->ksp, &slv->pc);CHKERRQ(ierr); ierr = PCSetType(slv->pc, PCMG);CHKERRQ(ierr); if (slv->options.galerkin) { ierr = PCMGSetGalerkin(slv->pc, PETSC_TRUE);CHKERRQ(ierr); } else { ierr = PCMGSetGalerkin(slv->pc, PETSC_FALSE);CHKERRQ(ierr); } ierr = KSPSetComputeOperators(slv->ksp, slv->callback->matrix, slv);CHKERRQ(ierr); ierr = KSPSetComputeRHS(slv->ksp, slv->callback->rhs, slv);CHKERRQ(ierr); ierr = KSPSetComputeInitialGuess(slv->ksp, slv->callback->guess, slv);CHKERRQ(ierr); ierr = KSPSetFromOptions(slv->ksp);CHKERRQ(ierr); ierr = PCGetType(slv->pc, &pc_type);CHKERRQ(ierr); ierr = PCMGGetLevels(slv->pc, &slv->options.levels);CHKERRQ(ierr); if (slv->options.levels < 1) slv->options.levels++; ierr = PCMGGetGalerkin(slv->pc, &slv->options.galerkin);CHKERRQ(ierr); if (strcmp(pc_type, PCGAMG) == 0 || strcmp(pc_type, PCHYPRE) == 0) slv->options.galerkin = 1; if (!slv->options.galerkin) { slv->levels = (ef_level*) malloc(slv->options.levels*sizeof(ef_level)); // setup callback for transforming rhs on coarse levels } else { slv->levels = (ef_level*) malloc(sizeof(ef_level)); } ierr = ef_fd_create(&slv->fd, EF_FD_STANDARD_O2);CHKERRQ(ierr); ierr = ef_operator_create(&slv->op, slv->levels, slv->fd, slv->grid.nd);CHKERRQ(ierr); ierr = ef_boundary_create(&slv->boundary, slv->levels, slv->options.levels, slv->dmap, &slv->state, slv->fd);CHKERRQ(ierr); slv->op->axisymmetric = slv->options.axisymmetric; slv->boundary->axisymmetric = slv->options.axisymmetric; ierr = DMSetMatType(slv->dm, MATAIJ);CHKERRQ(ierr); ierr = DMCreateGlobalVector(slv->dm, &slv->levels[0].eps);CHKERRQ(ierr); ierr = DMCreateGlobalVector(slv->dm, &slv->levels[0].g);CHKERRQ(ierr); ierr = DMCreateGlobalVector(slv->dm, &slv->levels[0].ag);CHKERRQ(ierr); ierr = DMCreateGlobalVector(slv->dm, &slv->levels[0].gcomp);CHKERRQ(ierr); ierr = DMCreateGlobalVector(slv->dm, &slv->levels[0].scale);CHKERRQ(ierr); ierr = DMCreateGlobalVector(slv->dm, &slv->levels[0].nscale);CHKERRQ(ierr); ierr = VecSet(slv->levels[0].g, 0);CHKERRQ(ierr); ierr = VecSet(slv->levels[0].gcomp, 1);CHKERRQ(ierr); ierr = VecSet(slv->levels[0].scale, 1);CHKERRQ(ierr); ierr = VecSet(slv->levels[0].nscale, 1);CHKERRQ(ierr); ierr = DMCoarsenHookAdd(slv->dm, slv->callback->coarsen, slv->callback->restrct, slv);CHKERRQ(ierr); return 0; }