void embPatlistSeqSearch (AjPFeattable ftable, const AjPSeq seq,
			  AjPPatlistSeq plist, AjBool reverse)
{
    AjPPatternSeq patseq = NULL;
    AjPPatComp compPat;

    ajDebug ("embPatlistSearchListSeq: Searching '%S' for %d patterns\n",
	     ajSeqGetNameS(seq), ajPatlistSeqGetSize(plist));

    while (ajPatlistSeqGetNext(plist,&patseq))
    {
        compPat = ajPatternSeqGetCompiled(patseq);

	if (!compPat && !embPatternSeqCompile(patseq))
        {
            ajPatlistSeqRemoveCurrent(plist);
            continue;
        }

        embPatternSeqSearch(ftable,seq,patseq,reverse);
        ajDebug("end loop\n");
    }

    ajPatlistSeqRewind(plist);

    return;
}
Exemple #2
0
AjBool ajPatlistSeqGetNext (AjPPatlistSeq thys, AjPPatternSeq* pattern)
{
    if (!thys->Iter)
	thys->Iter = ajListIterNew(thys->Patlist);

    if (!ajListIterDone(thys->Iter))
	*pattern = ajListIterGet(thys->Iter);
    else
    {
	ajPatlistSeqRewind(thys);
	return ajFalse;
    }

    return ajTrue;
}