/*
* Class: CocoJNI
* Method: cocoProblemGetLargestValuesOfInterest
* Signature: (J)[D
*/
JNIEXPORT jdoubleArray JNICALL Java_CocoJNI_cocoProblemGetLargestValuesOfInterest
(JNIEnv *jenv, jclass interface_cls, jlong jproblem_pointer) {
coco_problem_t *problem = NULL;
const double *result;
jdoubleArray jresult;
jint dimension;
/* This test is both to prevent warning because interface_cls was not used and to check for exceptions */
if (interface_cls == NULL) {
jclass Exception = (*jenv)->FindClass(jenv, "java/lang/Exception");
(*jenv)->ThrowNew(jenv, Exception, "Exception in cocoProblemGetLargestValuesOfInterest\n");
}
problem = (coco_problem_t *) jproblem_pointer;
dimension = (int) coco_problem_get_dimension(problem);
result = coco_problem_get_largest_values_of_interest(problem);
/* Prepare the return value */
jresult = (*jenv)->NewDoubleArray(jenv, dimension);
(*jenv)->SetDoubleArrayRegion(jenv, jresult, 0, dimension, result);
return jresult;
}
/* The gateway function */
void mexFunction(int nlhs, mxArray *plhs[], int nrhs, const mxArray *prhs[])
{
size_t *ref;
coco_problem_t *problem = NULL;
size_t nb_dim, i;
const double *res;
double *v; /* intermediate variable that aloows to set plhs[0] */
/* check for proper number of arguments */
if(nrhs!=1) {
mexErrMsgIdAndTxt("cocoProblemGetSmallestValuesOfInterest:nrhs","One input required.");
}
/* get the problem */
ref = (size_t *)mxGetData(prhs[0]);
problem = (coco_problem_t *)(*ref);
nb_dim = coco_problem_get_dimension(problem);
plhs[0] = mxCreateDoubleMatrix(1, nb_dim, mxREAL);
v = mxGetPr(plhs[0]);
/* call coco_problem_get_smallest_values_of_interest(...) */
res = coco_problem_get_smallest_values_of_interest(problem);
for (i = 0; i < nb_dim; i++){
v[i] = res[i];
}
}
/**
* @brief Evaluates the transformation.
*/
static void transform_vars_affine_evaluate(coco_problem_t *problem, const double *x, double *y) {
size_t i, j;
transform_vars_affine_data_t *data;
coco_problem_t *inner_problem;
if (coco_vector_contains_nan(x, coco_problem_get_dimension(problem))) {
coco_vector_set_to_nan(y, coco_problem_get_number_of_objectives(problem));
return;
}
data = (transform_vars_affine_data_t *) coco_problem_transformed_get_data(problem);
inner_problem = coco_problem_transformed_get_inner_problem(problem);
for (i = 0; i < inner_problem->number_of_variables; ++i) {
/* data->M has problem->number_of_variables columns and inner_problem->number_of_variables rows. */
const double *current_row = data->M + i * problem->number_of_variables;
data->x[i] = data->b[i];
for (j = 0; j < problem->number_of_variables; ++j) {
data->x[i] += x[j] * current_row[j];
}
}
coco_evaluate_function(inner_problem, data->x, y);
assert(y[0] + 1e-13 >= problem->best_value[0]);
}
/**
* Return a problem that stacks the output of two problems, namely
* of coco_evaluate_function and coco_evaluate_constraint. The accepted
* input remains the same and must be identical for the stacked
* problems.
*
* This is particularly useful to generate multiobjective problems,
* e.g. a biobjective problem from two single objective problems.
*
* Details: regions of interest must either agree or at least one
* of them must be NULL. Best parameter becomes somewhat meaningless.
*/
coco_problem_t *coco_stacked_problem_allocate(coco_problem_t *problem1,
coco_problem_t *problem2,
void *userdata,
coco_stacked_problem_free_data_t free_data) {
const size_t number_of_variables = coco_problem_get_dimension(problem1);
const size_t number_of_objectives = coco_problem_get_number_of_objectives(problem1)
+ coco_problem_get_number_of_objectives(problem2);
const size_t number_of_constraints = coco_problem_get_number_of_constraints(problem1)
+ coco_problem_get_number_of_constraints(problem2);
size_t i;
char *s;
const double *smallest, *largest;
coco_stacked_problem_data_t *data;
coco_problem_t *problem; /* the new coco problem */
assert(coco_problem_get_dimension(problem1) == coco_problem_get_dimension(problem2));
problem = coco_problem_allocate(number_of_variables, number_of_objectives, number_of_constraints);
s = coco_strconcat(coco_problem_get_id(problem1), "__");
problem->problem_id = coco_strconcat(s, coco_problem_get_id(problem2));
coco_free_memory(s);
s = coco_strconcat(coco_problem_get_name(problem1), " + ");
problem->problem_name = coco_strconcat(s, coco_problem_get_name(problem2));
coco_free_memory(s);
problem->evaluate_function = coco_stacked_problem_evaluate;
if (number_of_constraints > 0)
problem->evaluate_constraint = coco_stacked_problem_evaluate_constraint;
/* set/copy "boundaries" and best_parameter */
smallest = problem1->smallest_values_of_interest;
if (smallest == NULL)
smallest = problem2->smallest_values_of_interest;
largest = problem1->largest_values_of_interest;
if (largest == NULL)
largest = problem2->largest_values_of_interest;
for (i = 0; i < number_of_variables; ++i) {
if (problem2->smallest_values_of_interest != NULL)
assert(smallest[i] == problem2->smallest_values_of_interest[i]);
if (problem2->largest_values_of_interest != NULL)
assert(largest[i] == problem2->largest_values_of_interest[i]);
if (smallest != NULL)
problem->smallest_values_of_interest[i] = smallest[i];
if (largest != NULL)
problem->largest_values_of_interest[i] = largest[i];
if (problem->best_parameter) /* bbob2009 logger doesn't work then anymore */
coco_free_memory(problem->best_parameter);
problem->best_parameter = NULL;
if (problem->best_value)
coco_free_memory(problem->best_value);
problem->best_value = NULL; /* bbob2009 logger doesn't work */
}
/* setup data holder */
data = coco_allocate_memory(sizeof(*data));
data->problem1 = problem1;
data->problem2 = problem2;
data->data = userdata;
data->free_data = free_data;
problem->data = data;
problem->free_problem = coco_stacked_problem_free; /* free self->data and coco_problem_free(self) */
return problem;
}