/**
* Instantiates a PLP frontend with energy based VAD and
* VADGate components.
*/
Tracter::Component<float>*
Tracter::PLPVADGraphFactory::Create(Component<float>* iComponent)
{
Component<float>* p = iComponent;
p = new ZeroFilter(p);
p = new Frame(p);
p = new Periodogram(p);
p = new MelFilter(p);
p = new LPCepstrum(p);
p = normaliseMean(p);
p = deltas(p);
p = normaliseVariance(p);
/* VAD */
Component<float>* v = iComponent;
v = new Frame(v);
v = new Energy(v);
Modulation* m = new Modulation(v);
if (!GetEnv("MinimaVAD", 0))
{
// Old VAD
NoiseVAD* mv = new NoiseVAD(m, v);
v = new VADGate(p, mv);
}
else
{
// New minima-based VAD
Component<float>* n = new Minima(v);
Component<BoolType>* b = new Comparator(m, n);
b = new TimedLatch(b);
v = new Gate(p, b);
}
return v;
}
void frameFieldBackgroundMesh2D::exportCrossField(const std::string &filename)
{
FILE *f = Fopen(filename.c_str(), "w");
if(!f) {
Msg::Error("Could not open file '%s'", filename.c_str());
return;
}
fprintf(f,"View \"Cross Field\"{\n");
std::vector<double> deltas(2);
deltas[0] = 0.;
deltas[1] = M_PI;
for (std::vector<MVertex*>::iterator it = beginvertices(); it!=endvertices(); it++) {
MVertex *v = *it;
double angle_current = angle(v);
GPoint p = get_GPoint_from_MVertex(v);
for (int i=0; i<2; i++) {
Pair<SVector3, SVector3> dirs = compute_crossfield_directions(v->x(),v->y(),angle_current+deltas[i]);
fprintf(f,"VP(%g,%g,%g) {%g,%g,%g};\n",p.x(),p.y(),p.z(),dirs.first()[0], dirs.first()[1], dirs.first()[2]);
fprintf(f,"VP(%g,%g,%g) {%g,%g,%g};\n",p.x(),p.y(),p.z(),dirs.second()[0], dirs.second()[1], dirs.second()[2]);
}
}
fprintf(f,"};\n");
fclose(f);
}
/**
* Instantiates a basic MFCC frontend with speech/sil detection.
*/
Tracter::Component<float>*
Tracter::BasicSpeechDetGraphFactory::Create(Component<float>* iComponent)
{
Component<float>* p = iComponent;
p = new ZeroFilter(p);
p = new Frame(p);
p = new Periodogram(p);
p = new MelFilter(p);
p = new Cepstrum(p);
p = normaliseMean(p);
p = deltas(p);
p = normaliseVariance(p);
// Minima-based VAD
Component<float>* v = iComponent;
v = new Frame(v);
v = new Energy(v);
Modulation* m = new Modulation(v);
Component<float>* n = new Minima(v);
Component<BoolType>* b = new Comparator(m, n);
b = new TimedLatch(b);
Component<float>* f = new BoolToFloat(b);
// Concatenation
Concatenate* c = new Concatenate();
#ifdef HAVE_TORCH3
p = new MLP(p);
#endif
c->Add(p);
c->Add(f);
return c;
}
void Subsampling::backpropagate(Eigen::MatrixXd* ein, Eigen::MatrixXd*& eout,
bool backpropToPrevious)
{
const int N = a.rows();
yd.conservativeResize(N, Eigen::NoChange);
e.conservativeResize(N, Eigen::NoChange);
// Derive activations
activationFunctionDerivative(act, y, yd);
deltas = yd.cwiseProduct(*ein);
e.setZero();
for(int fmo = 0; fmo < fm; fmo++)
{
Wd[fmo].setZero();
if(bias)
Wbd[fmo].setZero();
}
for(int n = 0; n < N; n++)
{
int outputIdx = 0;
for(int fmo = 0; fmo < fm; fmo++)
{
for(int ri = 0, ro = 0; ri < maxRow; ri += kernelRows, ro++)
{
int rowBase = fmo * fmInSize + ri * inCols;
for(int ci = 0, co = 0; ci < maxCol;
ci += kernelCols, co++, outputIdx++)
{
const double d = deltas(n, outputIdx);
for(int kr = 0; kr < kernelRows; kr++)
{
for(int kc = 0, inputIdx = rowBase + ci; kc < kernelCols;
kc++, inputIdx++)
{
e(n, inputIdx) += W[fmo](ro, co) * d;
Wd[fmo](ro, co) += d * (*x)(n, inputIdx);
}
}
if(bias)
Wbd[fmo](ro, co) += d;
}
}
}
}
if(regularization.l1Penalty > 0.0)
{
for(int fmo = 0; fmo < fm; fmo++)
Wd[fmo].array() += regularization.l1Penalty * W[fmo].array() / W[fmo].array().abs();
}
if(regularization.l2Penalty > 0.0)
{
for(int fmo = 0; fmo < fm; fmo++)
Wd[fmo] += regularization.l2Penalty * W[fmo];
}
eout = &e;
}
/**
* Instantiates a SPTK based mcep frontend.
*/
Tracter::Component<float>*
Tracter::MCepGraphFactory::Create(Component<float>* iComponent)
{
Component<float>* p = iComponent;
p = new Frame(p);
p = new Periodogram(p);
p = new MCep(p);
p = normaliseMean(p);
p = deltas(p);
p = normaliseVariance(p);
return p;
}
/**
* Does nothing other than add CMVN and deltas if necessary. Requires
* a feature level source.
*/
Tracter::Component<float>*
Tracter::CMVNGraphFactory::Create(Component<float>* iComponent)
{
Component<float>* p = iComponent;
p = normaliseMean(p);
p = deltas(p);
p = normaliseVariance(p);
// Doesn't really belong, but it's easy to "comment out" behind the option
if (GetEnv("LinearTransform", false))
p = new LinearTransform(p);
return p;
}
/**
* Instantiates a PLP frontend.
*/
Tracter::Component<float>*
Tracter::PLPGraphFactory::Create(Component<float>* iComponent)
{
Component<float>* p = iComponent;
p = new ZeroFilter(p);
p = new Frame(p);
p = new Periodogram(p);
p = new MelFilter(p);
p = new LPCepstrum(p);
p = normaliseMean(p);
p = deltas(p);
p = normaliseVariance(p);
return p;
}
/**
* Calculate the multiple scattering correction factor and weight for the given
* mur value
* @param irp Index of current mur point (assumed zero based)
* @param muR Single \f$\mu*r\f$ slice value
* @param abs Absorption and self-attenuation factor (\f$A_s\f$ in Mayers paper)
* @return A pair of (factor,weight)
*/
std::pair<double, double>
MayersSampleCorrectionStrategy::calculateMS(const size_t irp, const double muR,
const double abs) {
// Radial coordinate raised to power 1/3 to ensure uniform density of points
// across circle following discussion with W.G.Marshall (ISIS)
const double radDistPower = 1. / 3.;
const double muH = muR * (m_pars.cylHeight / m_pars.cylRadius);
const double cosaz = cos(m_pars.azimuth);
seedRNG(irp);
// Take an average over a number of sets of second scatters
std::vector<double> deltas(m_pars.msNRuns, 0.0);
for (size_t j = 0; j < m_pars.msNRuns; ++j) {
double sum = 0.0;
for (size_t i = 0; i < m_pars.msNEvents; ++i) {
// Random (r,theta,z)
const double r1 = pow(m_rng->nextValue(), radDistPower) * muR;
const double r2 = pow(m_rng->nextValue(), radDistPower) * muR;
const double z1 = m_rng->nextValue() * muH;
const double z2 = m_rng->nextValue() * muH;
const double th1 = m_rng->nextValue() * TWOPI;
const double th2 = m_rng->nextValue() * TWOPI;
double fact1 = pow(muR, 2) - std::pow(r1 * sin(th1), 2);
if (fact1 < 0.0)
fact1 = 0.0;
// Path into first point
const double mul1 = sqrt(fact1) + r1 * cos(th1);
double fact2 = pow(muR, 2) - pow(r2 * sin(m_pars.twoTheta - th2), 2);
if (fact2 < 0.0)
fact2 = 0.0;
// Path out from final point
const double mul2 =
(sqrt(fact2) - r2 * cos(m_pars.twoTheta - th2)) / cosaz;
// Path between point 1 & 2
const double mul12 =
sqrt(pow(r1 * cos(th1) - r2 * cos(th2), 2) +
pow(r1 * sin(th1) - r2 * sin(th2), 2) + pow(z1 - z2, 2));
if (mul12 < 0.01)
continue;
sum += exp(-(mul1 + mul2 + mul12)) / pow(mul12, 2);
}
const double beta =
pow(M_PI * muR * muR * muH, 2) * sum / to<double>(m_pars.msNEvents);
const double delta = 0.25 * beta / (M_PI * abs * muH);
deltas[j] = delta;
}
auto stats =
getStatistics(deltas, StatOptions::Mean | StatOptions::CorrectedStdDev);
return std::make_pair(stats.mean, stats.mean / stats.standard_deviation);
}
/**
* Instantiates a "basic MFCC" frontend with SNR spectral features.
*/
Tracter::Component<float>*
Tracter::SNRGraphFactory::Create(Component<float>* iComponent)
{
Component<float>* p = iComponent;
p = new ZeroFilter(p);
p = new Frame(p);
p = new Periodogram(p);
Component<float>* m = new Minima(p);
m = new TransverseFilter(m);
p = new SNRSpectrum(p, m);
p = new MelFilter(p);
p = new Cepstrum(p);
p = normaliseMean(p);
p = deltas(p);
p = normaliseVariance(p);
return p;
}
void ConvolutionalLayer::backPropagate(vector<mat>& errors, const vector<mat>& fins,
const vector<mat>& fouts, float learning_rate) {
size_t nInputs = getNumInputMaps(),
nOutputs = getNumOutputMaps();
size_t batch_size = fins[0].getCols();
// In the following codes, the iteration index i and j stands for
// i : # of input features. i = 0 ~ nInputs - 1
// j : # of output features. j = 0 ~ nOutputs - 1
vector<mat> deltas(nOutputs);
for (size_t j=0; j<nOutputs; ++j)
deltas[j] = fouts[j] & ( 1.0f - fouts[j] ) & errors[j];
this->feedBackward(errors, deltas);
assert(learning_rate > 0);
float lr = learning_rate / batch_size;
// iImgs represents the input images.
// oImgs represents the output images. (Before sigmoid or any other activation function)
vector<vector<mat> > iImgs(nInputs), oImgs(nOutputs);
for (size_t i=0; i<nInputs; ++i)
iImgs[i] = reshapeVectors2Images(fins[i], _input_img_size);
for (size_t j=0; j<nOutputs; ++j)
oImgs[j] = reshapeVectors2Images(deltas[j], this->get_output_img_size());
// Update kernels with learning rate
for (size_t k=0; k<batch_size; ++k) {
for (size_t j=0; j<nOutputs; ++j) {
for (size_t i=0; i<nInputs; ++i)
_kernels[i][j] -= convn(rot180(iImgs[i][k]), oImgs[j][k], "valid_shm") * lr;
_bias[j] -= sum_all(oImgs[j][k]) * lr;
}
}
}
/**
* Instantiates a basic MFCC frontend with MLPVAD and VADGate
* components.
*/
Tracter::Component<float>*
Tracter::BasicMLPVADGraphFactory::Create(Component<float>* iComponent)
{
/* Basic signal processing chain */
Component<float>* p = iComponent;
p = new ZeroFilter(p);
p = new Frame(p);
p = new Periodogram(p);
p = new MelFilter(p);
p = new Cepstrum(p);
p = normaliseMean(p);
p = deltas(p);
p = normaliseVariance(p);
/* VAD - works on the "basic" features */
Component<float>* v = new MLP(p);
MLPVAD* mv = new MLPVAD(v);
p = new VADGate(p, mv);
return p;
}
void MaxPooling::backpropagate(Eigen::MatrixXd* ein, Eigen::MatrixXd*& eout)
{
const int N = y.rows();
e.conservativeResize(N, Eigen::NoChange);
deltas = (*ein);
e.setZero();
#pragma omp parallel for
for(int n = 0; n < N; n++)
{
int outputIdx = 0;
int inputIdx = 0;
for(int fmo = 0; fmo < fm; fmo++)
{
for(int ri = 0, ro = 0; ri < maxRow; ri += kernelRows, ro++)
{
int rowBase = fmo * fmInSize + ri * inCols;
for(int ci = 0, co = 0; ci < maxCol; ci += kernelCols, co++, outputIdx++)
{
double m = -std::numeric_limits<double>::max();
int idx = -1;
for(int kr = 0; kr < kernelRows; kr++)
{
inputIdx = rowBase + ci;
for(int kc = 0; kc < kernelCols; kc++, inputIdx++)
if((*x)(n, inputIdx) > m)
{
m = (*x)(n, inputIdx);
idx = inputIdx;
}
}
e(n, idx) = deltas(n, outputIdx);
}
}
}
}
eout = &e;
}
void VideoRegionsConfigDialog::initControls()
{
HWND hwnd = m_ctrlThis.getWindow();
m_videoClasses.setWindow(GetDlgItem(hwnd, IDC_VIDEO_CLASS_NAMES));
m_videoRects.setWindow(GetDlgItem(hwnd, IDC_VIDEO_RECTS));
m_videoRecognitionInterval.setWindow(GetDlgItem(hwnd, IDC_VIDEO_RECOGNITION_INTERVAL));
m_videoRecognitionIntervalSpin.setWindow(GetDlgItem(hwnd, IDC_VIDEO_RECOGNITION_INTERVAL_SPIN));
int limitersTmp[] = {50, 200};
int deltasTmp[] = {5, 10};
std::vector<int> limitters(limitersTmp, limitersTmp + sizeof(limitersTmp) /
sizeof(int));
std::vector<int> deltas(deltasTmp, deltasTmp + sizeof(deltasTmp) /
sizeof(int));
m_videoRecognitionIntervalSpin.setBuddy(&m_videoRecognitionInterval);
m_videoRecognitionIntervalSpin.setAccel(0, 1);
m_videoRecognitionIntervalSpin.setRange32(0, INT_MAX);
m_videoRecognitionIntervalSpin.setAutoAccelerationParams(&limitters, &deltas, 50);
m_videoRecognitionIntervalSpin.enableAutoAcceleration(true);
}
std::vector<double> NeuralLayer::computeDeltas(const std::vector<double>& error, const std::vector<std::vector<double> >& nextWeights)
{
static unsigned int first = 1;
int nextLayerOuts;
if(first)
nextLayerOuts = error.size();
else
nextLayerOuts = error.size()-1;
std::vector<double> deltas(m_numNodes+1);
for(int j=0; j<m_numNodes+1; ++j)
{
for(int i=0; i<nextLayerOuts; ++i)
{
if(first)
deltas[j] += error[i] * nextWeights[j][i];
else
deltas[j] += error[i+1] * nextWeights[j][i];
}
}
first = 0;
return deltas;
}
int
main()
{
DenseVector sings;
GeMat deltas(3,2);
std::vector<GeMat> _deltas;
Function x2f(x2, sings);
Function onef(one, sings);
Function x3f(x3, sings);
Function cosf(mycos, sings);
Function sinf(mysin, sings);
Function expf(myexp, sings);
Basis basis(4);
basis.template enforceBoundaryCondition<lawa::DirichletBC>();
IndexSet indexset;
Coeff1D coeff;
std::vector<Function> fvec;
int rank = 2;
int dim = 64;
for (int i=1; i<=32; ++i) {
fvec.push_back(cosf);
fvec.push_back(onef);
fvec.push_back(x2f);
fvec.push_back(onef);
}
SepCoeff coeffs(rank, dim);
IndexSetVec indexsetvec(dim);
lawa::SeparableFunctionD<T> F(fvec, rank, dim);
MatInt derivs(rank, dim);
for (int i=1; i<=rank; ++i) {
for (int j=1; j<=dim; ++j) {
derivs(i,j) = 0;
_deltas.push_back(deltas);
}
}
lawa::SeparableRHSD<T, Basis> Fint(basis, F, _deltas, derivs);
getFullIndexSet(basis, indexset, 2);
std::cout << "The index set size is\n" << indexset.size()
<< std::endl;
for (int l=0; (unsigned)l<indexsetvec.size(); ++l) {
indexsetvec[l] = indexset;
}
/* Map */
lawa::Mapwavind<Index1D> map(dim);
map.rehash(50);
genCoefficients(coeffs, Fint, indexsetvec);
lawa::HTCoefficients<T, Basis> f(dim, basis, map);
lawa::HTCoefficients<T, Basis> u(dim, basis, map);
lawa::HTCoefficients<T, Basis> r(dim, basis, map);
Laplace1D LaplaceBil(basis);
RefLaplace1D RefLaplaceBil(basis.refinementbasis);
Identity1D IdentityBil(basis);
RefIdentity1D RefIdentityBil(basis.refinementbasis);
LOp_Lapl1D lapl(basis, basis, RefLaplaceBil, LaplaceBil);
Sepop A(lapl, dim, dim);
lawa::Sepdiagscal<Basis> S(dim, basis);
setScaling(S, 0.5);
lawa::HTAWGM_Params params;
params.maxit_pcg = 100;
params.maxit_awgm = 100;
params.tol_awgm = 1e-08;
params.delta1_pcg = 1e-01;
params.delta2_pcg = 1e-01;
params.delta3_pcg = 1e-01;
params.alpha = 0.95;
params.recompr = 1e-02;
params.gamma = 0.1;
params.theta = 1e-08;
std::cout << "HTAWGM params =\n";
std::cout << params << std::endl;
unsigned its;
double res;
its = htawgm(A, S, u, Fint, indexsetvec, res, params);
std::cout << "htawgm took " << its << " iterations to reach "
<< res << " accuracy" << std::endl;
std::cout << "Final scaling set to\n" << S << std::endl;
return 0;
}
Timeline::Timeline(const RealVector& points): time_points(points), deltas(points.extent(blitz::firstDim) - 1)
{
for (int i = 0; i < points.extent(blitz::firstDim) - 1; i++) deltas(i) = points(i + 1) - points(i);
}
int main(int argc, char **argv)
{
#ifdef QUESO_HAVE_LIBMESH
unsigned int i;
unsigned int j;
const unsigned int num_pairs = 5;
const unsigned int num_samples = 1e4;
const double alpha = 3.0;
const double beta = 1.0;
QUESO::EnvOptionsValues opts;
opts.m_seed = -1;
MPI_Init(&argc, &argv);
QUESO::FullEnvironment env(MPI_COMM_WORLD, "", "", &opts);
#ifdef LIBMESH_DEFAULT_SINGLE_PRECISION
// SLEPc farts with libMesh::Real==float
libmesh_example_assert(false, "--disable-singleprecision");
#endif
// Need an artificial block here because libmesh needs to
// call PetscFinalize before we call MPI_Finalize
#ifdef LIBMESH_HAVE_SLEPC
{
libMesh::LibMeshInit init(argc, argv);
libMesh::Mesh mesh(init.comm());
libMesh::MeshTools::Generation::build_square(mesh,
20, 20, 0.0, 1.0, 0.0, 1.0, libMeshEnums::QUAD4);
QUESO::FunctionOperatorBuilder fobuilder;
fobuilder.order = "FIRST";
fobuilder.family = "LAGRANGE";
fobuilder.num_req_eigenpairs = num_pairs;
QUESO::LibMeshFunction mean(fobuilder, mesh);
QUESO::LibMeshNegativeLaplacianOperator precision(fobuilder, mesh);
QUESO::InfiniteDimensionalGaussian mu(env, mean, precision, alpha, beta);
// Vector to hold all KL coeffs
std::vector<double> means(num_pairs, 0.0);
std::vector<double> sumsqs(num_pairs, 0.0);
std::vector<double> deltas(num_pairs, 0.0);
double draw;
for (i = 1; i < num_samples + 1; i++) {
mu.draw();
for (j = 0; j < num_pairs; j++) {
draw = mu.get_kl_coefficient(j);
deltas[j] = draw - means[j];
means[j] += (double) deltas[j] / i;
sumsqs[j] += deltas[j] * (draw - means[j]);
}
// std::cerr << "MEAN IS: " << means[0] << std::endl;
}
std::vector<double> vars(num_pairs, 0.0);
for (j = 0; j < num_pairs; j++) {
vars[j] = sumsqs[j] / (num_samples - 1);
}
double sigma = beta / std::pow(precision.get_eigenvalue(j), alpha / 2.0);
double sigmasq = sigma * sigma;
double mean_min;
double mean_max;
for (j = 0; j < num_pairs; j++) {
// Mean is N(0, (lambda_j^{- alpha / 2} * beta)^2 / n)
mean_min = -3.0 * sigma / std::sqrt(num_samples);
mean_max = 3.0 * sigma / std::sqrt(num_samples);
if (means[j] < mean_min || means[j] > mean_max) {
std::cerr << "mean kl test failed" << std::endl;
return 1;
}
}
double var_min;
double var_max;
// var[j] should be approximately ~ N(sigma^2, 2 sigma^4 / (num_samples - 1))
for (j = 0; j < num_pairs; j++) {
var_min = sigmasq - 3.0 * sigmasq * std::sqrt(2.0 / (num_samples - 1));
var_max = sigmasq + 3.0 * sigmasq * std::sqrt(2.0 / (num_samples - 1));
if (vars[j] < var_min || vars[j] > var_max) {
std::cerr << "variance kl test failed" << std::endl;
return 1;
}
}
}
#endif // LIBMESH_HAVE_SLEPC
MPI_Finalize();
return 0;
#else
return 77;
#endif
}
StatusWith<std::vector<BSONObj>> FTDCDecompressor::uncompress(ConstDataRange buf) {
ConstDataRangeCursor compressedDataRange(buf);
// Read the length of the uncompressed buffer
auto swUncompressedLength = compressedDataRange.readAndAdvance<LittleEndian<std::uint32_t>>();
if (!swUncompressedLength.isOK()) {
return {swUncompressedLength.getStatus()};
}
// Now uncompress the data
// Limit size of the buffer we need zlib
auto uncompressedLength = swUncompressedLength.getValue();
if (uncompressedLength > 10000000) {
return Status(ErrorCodes::InvalidLength, "Metrics chunk has exceeded the allowable size.");
}
auto statusUncompress = _compressor.uncompress(compressedDataRange, uncompressedLength);
if (!statusUncompress.isOK()) {
return {statusUncompress.getStatus()};
}
ConstDataRangeCursor cdc = statusUncompress.getValue();
// The document is not part of any checksum so we must validate it is correct
auto swRef = cdc.readAndAdvance<Validated<BSONObj>>();
if (!swRef.isOK()) {
return {swRef.getStatus()};
}
BSONObj ref = swRef.getValue();
// Read count of metrics
auto swMetricsCount = cdc.readAndAdvance<LittleEndian<std::uint32_t>>();
if (!swMetricsCount.isOK()) {
return {swMetricsCount.getStatus()};
}
std::uint32_t metricsCount = swMetricsCount.getValue();
// Read count of samples
auto swSampleCount = cdc.readAndAdvance<LittleEndian<std::uint32_t>>();
if (!swSampleCount.isOK()) {
return {swSampleCount.getStatus()};
}
std::uint32_t sampleCount = swSampleCount.getValue();
// Limit size of the buffer we need for metrics and samples
if (metricsCount * sampleCount > 1000000) {
return Status(ErrorCodes::InvalidLength,
"Metrics Count and Sample Count have exceeded the allowable range.");
}
std::vector<std::uint64_t> metrics;
metrics.reserve(metricsCount);
// We pass the reference document as both the reference document and current document as we only
// want the array of metrics.
(void)FTDCBSONUtil::extractMetricsFromDocument(ref, ref, &metrics);
if (metrics.size() != metricsCount) {
return {ErrorCodes::BadValue,
"The metrics in the reference document and metrics count do not match"};
}
std::vector<BSONObj> docs;
// Allocate space for the reference document + samples
docs.reserve(1 + sampleCount);
docs.emplace_back(ref.getOwned());
// We must always return the reference document
if (sampleCount == 0) {
return {docs};
}
// Read the samples
std::vector<std::uint64_t> deltas(metricsCount * sampleCount);
// decompress the deltas
std::uint64_t zeroesCount = 0;
auto cdrc = ConstDataRangeCursor(cdc);
for (std::uint32_t i = 0; i < metricsCount; i++) {
for (std::uint32_t j = 0; j < sampleCount; j++) {
if (zeroesCount) {
deltas[FTDCCompressor::getArrayOffset(sampleCount, j, i)] = 0;
zeroesCount--;
continue;
}
auto swDelta = cdrc.readAndAdvance<FTDCVarInt>();
if (!swDelta.isOK()) {
return swDelta.getStatus();
}
if (swDelta.getValue() == 0) {
auto swZero = cdrc.readAndAdvance<FTDCVarInt>();
if (!swZero.isOK()) {
return swDelta.getStatus();
}
zeroesCount = swZero.getValue();
}
deltas[FTDCCompressor::getArrayOffset(sampleCount, j, i)] = swDelta.getValue();
}
}
// Inflate the deltas
for (std::uint32_t i = 0; i < metricsCount; i++) {
deltas[FTDCCompressor::getArrayOffset(sampleCount, 0, i)] += metrics[i];
}
for (std::uint32_t i = 0; i < metricsCount; i++) {
for (std::uint32_t j = 1; j < sampleCount; j++) {
deltas[FTDCCompressor::getArrayOffset(sampleCount, j, i)] +=
deltas[FTDCCompressor::getArrayOffset(sampleCount, j - 1, i)];
}
}
for (std::uint32_t i = 0; i < sampleCount; ++i) {
for (std::uint32_t j = 0; j < metricsCount; ++j) {
metrics[j] = deltas[j * sampleCount + i];
}
docs.emplace_back(FTDCBSONUtil::constructDocumentFromMetrics(ref, metrics).getValue());
}
return {docs};
}
string getDBStructure()
{
return "----------------------------------------------------------------------\n\
--\n\
-- MPKG package system\n\
-- Database creation script\n\
-- $Id: dbstruct.cpp,v 1.3 2007/11/02 20:19:45 i27249 Exp $\n\
--\n\
----------------------------------------------------------------------\n\
\n\
create table packages (\n\
package_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
package_name TEXT NOT NULL,\n\
package_version TEXT NOT NULL,\n\
package_arch TEXT NOT NULL,\n\
package_build TEXT NULL,\n\
package_compressed_size TEXT NOT NULL,\n\
package_installed_size TEXT NOT NULL,\n\
package_short_description TEXT NULL,\n\
package_description TEXT NULL, \n\
package_changelog TEXT NULL,\n\
package_packager TEXT NULL,\n\
package_packager_email TEXT NULL,\n\
package_installed INTEGER NOT NULL,\n\
package_configexist INTEGER NOT NULL,\n\
package_action INTEGER NOT NULL,\n\
package_md5 TEXT NOT NULL,\n\
package_filename TEXT NOT NULL,\n\
package_betarelease TEXT NOT NULL,\n\
package_installed_by_dependency INTEGER NOT NULL DEFAULT '0',\n\
package_type INTEGER NOT NULL DEFAULT '0',\n\
package_add_date INTEGER NOT NULL DEFAULT '0',\n\
package_build_date INTEGER NOT NULL DEFAULT '0',\n\
package_repository_tags TEXT NULL, \n\
package_distro_version TEXT NULL, \n\
package_provides TEXT NULL, \n\
package_conflicts TEXT NULL \n\
);\n\
create index ppname on packages (package_id, package_name, package_version, package_action, package_installed, package_md5);\n\
\n\
create table files (\n\
file_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
file_name TEXT NOT NULL,\n\
file_type INTEGER NOT NULL,\n\
packages_package_id INTEGER NOT NULL\n\
);\n\
create index pname on files (file_name, packages_package_id);\n\
\n\
create table conflicts (\n\
conflict_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
conflict_file_name TEXT NOT NULL,\n\
backup_file TEXT NOT NULL,\n\
conflicted_package_id INTEGER NOT NULL\n\
);\n\
\n\
create table locations (\n\
location_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
packages_package_id INTEGER NOT NULL,\n\
server_url TEXT NOT NULL,\n\
location_path TEXT NOT NULL\n\
);\n\
create index locpid on locations(packages_package_id, location_path, server_url);\n\
create table tags (\n\
tags_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
tags_name TEXT NOT NULL\n\
);\n\
create index ptag on tags (tags_id, tags_name);\n\
\n\
create table tags_links (\n\
tags_link_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
packages_package_id INTEGER NOT NULL,\n\
tags_tag_id INTEGER NOT NULL\n\
);\n\
create index ptaglink on tags_links (packages_package_id, tags_tag_id);\n\
\n\
create table dependencies (\n\
dependency_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
packages_package_id INTEGER NOT NULL,\n\
dependency_condition INTEGER NOT NULL DEFAULT '1',\n\
dependency_type INTEGER NOT NULL DEFAULT '1',\n\
dependency_package_name TEXT NOT NULL,\n\
dependency_package_version TEXT NULL,\n\
dependency_build_only INTEGER NOT NULL DEFAULT '0' \
);\n\
\n\
create index pdeps on dependencies (packages_package_id, dependency_id, dependency_package_name, dependency_package_version, dependency_condition);\n\
\n\
create table history (\n\
history_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
history_event INTEGER NOT NULL,\n\
history_data TEXT NULL\n\
);\n\
create table deltas (\n\
delta_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
packages_package_id INTEGER NOT NULL,\n\
delta_url TEXT NOT NULL,\n\
delta_md5 TEXT NOT NULL,\n\
delta_orig_filename TEXT NOT NULL,\n\
delta_orig_md5 TEXT NOT NULL,\n\
delta_size TEXT NULL\n\
);\n\
-- INTERNATIONAL SUPPORT\n\
\n\
--create table descriptions (\n\
-- description_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
-- packages_package_id INTEGER NOT NULL,\n\
-- description_language TEXT NOT NULL,\n\
-- description_text TEXT NOT NULL,\n\
-- short_description_text TEXT NOT NULL\n\
--);\n\
\n\
--create table changelogs (\n\
-- changelog_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
-- packages_package_id INTEGER NOT NULL,\n\
-- changelog_language TEXT NOT NULL,\n\
-- changelog_text TEXT NOT NULL\n\
--);\n\
\n\
-- RATING SYSTEM - SUPPORT FOR FUTURE\n\
--create table ratings (\n\
-- rating_id INTEGER PRIMARY KEY AUTOINCREMENT UNIQUE,\n\
-- rating_value INTEGER NOT NULL,\n\
-- packages_package_name TEXT NOT NULL\n\
--);\n\
";
}
static void llSharesToLength(int totalLength, const std::vector<LiteralLength*>& lls, const char* f_at) {
int lengthRemaining = totalLength;
int totalShareCount = 0;
std::vector<LiteralLength*> shareLLs;
for (LiteralLength* ll : lls) {
if (ll->shares) {
totalShareCount += ll->value;
shareLLs.push_back(ll);
} else {
lengthRemaining -= ll->value;
}
}
if (lengthRemaining < 0) {
throw DSLException(f_at, "Sum of length of fixed-length content exceeds available length.");
}
if (totalShareCount == 0) {
if (lengthRemaining > 0) {
throw DSLException(f_at, "No share-length content to distribute remaining length to.");
}
// Distributing 0 length amongst 0 total shares is fine: all resulting share lengths are 0.
for (LiteralLength* ll : lls) {
if (ll->shares) {
ll->value = 0;
ll->shares = false;
}
}
return;
}
// Initially, distribute from the total length so that each length is the floor of its target
// value based on uniform shares.
float avgShareLength = lengthRemaining / (float)totalShareCount;
std::vector<float> deltas(shareLLs.size());
for (int i = 0; i < shareLLs.size(); ++i) {
float targetLength = shareLLs[i]->value * avgShareLength;
int length = floorf(targetLength);
shareLLs[i]->value = length;
shareLLs[i]->shares = false;
deltas[i] = targetLength - length;
lengthRemaining -= length;
}
// lengthRemaining should be less than shareCounts.size(), but do this anyway in case of numerical
// error
while (lengthRemaining >= shareLLs.size()) {
for (int i = 0; i < shareLLs.size(); ++i) {
shareLLs[i]->value++;
deltas[i] -= 1.f;
}
lengthRemaining -= shareLLs.size();
}
// Distribute remaining length to the lengths with the largest deltas.
int n = deltas.size() - 1 - lengthRemaining;
std::vector<float> deltasCopy(deltas);
std::nth_element(deltasCopy.begin(), deltasCopy.begin() + n, deltasCopy.end());
float deltaThreshold = deltasCopy[n];
for (int i = 0; i < shareLLs.size() && lengthRemaining > 0; ++i) {
if (deltas[i] > deltaThreshold) {
shareLLs[i]->value++;
--lengthRemaining;
}
}
for (int i = 0; i < shareLLs.size() && lengthRemaining > 0; ++i) {
if (deltas[i] == deltaThreshold) {
shareLLs[i]->value++;
--lengthRemaining;
}
}
assert(lengthRemaining == 0);
}