void CILDMMethod::initializeParameter()
{
addObjectReference("Number of slow variables", mSlow, CCopasiObject::ValueInt);
addMatrixReference("Contribution of Species to Slow Space", mVslow, CCopasiObject::ValueDbl);
initializeIntegrationsParameter();
assertParameter("Deuflhard Tolerance", CCopasiParameter::UDOUBLE, (C_FLOAT64) 1.0e-6);
createAnnotationsM();
emptyVectors();
}
void CILDMModifiedMethod::start(const CState * initialState)
{
mReducedModel = true;
integrationMethodStart(initialState);
/* ILDM related staff */
mDtol = * getValue("Deuflhard Tolerance").pUDOUBLE;
mVslow.resize(mData.dim, mData.dim);
mVslow_metab.resize(mData.dim, mData.dim);
mVslow_space.resize(mData.dim);
mVfast_space.resize(mData.dim);
emptyVectors();
return;
}
void CILDMMethod::start(const CState * initialState)
{
integrationMethodStart(initialState);
mDtol = * getValue("Deuflhard Tolerance").pUDOUBLE;
/* ILDM related staff */
//mDtol = mpProblem->getDeufelhardTol();
mVslow.resize(mData.dim, mData.dim);
mVslow_metab.resize(mData.dim, mData.dim);
mVslow_space.resize(mData.dim);
mVfast_space.resize(mData.dim);
//createAnnotationsM();
emptyVectors();
return;
}