int mainLoop(int fd, sigset_t* sigMask)
{
/*Endless loop for all commands*/
while(1)
{
/*Preparing for pselect() call*/
fd_set fds;
FD_ZERO(&fds);
FD_SET(fd, &fds);
/*Calling pselect()*/
if (pselect(fd + 1, &fds, NULL, NULL, NULL, sigMask) == -1)
{
/*pselect() has returned -1, what the problem*/
int errorCode = errno;
if (errorCode == EINTR)
{
/*Now we must handle every signal we caught*/
handleSignals();
/*Trying to call pselect() one more time*/
continue;
}
/*it is an unexpected system call error, we must stop processing*/
onSystemCallError("pselect()", errorCode);
} /*if (pselect() == -1)*/
assert(FD_ISSET(fd, &fds));
if (!processInputCommand(fd)) /* function returns 0 if fd was closed */
return 0;
} /*while(1)*/
}
int Server::init(std::string configPath) {
m_configPath = configPath;
srand((int)time(NULL));
if (ConfigParser::Instance()->Load(m_configPath) != 0) {
return -1;
}
EasyStat::Instance()->Init(
ConfigParser::Instance()->GetStr("stat", "file_name").c_str(),
stat_desc,
STAT_OVER, true);
AppLog::Instance()->Init(
ConfigParser::Instance()->GetStr("log", "log_dir"),
ConfigParser::Instance()->GetStr("log", "file_prefix"),
ConfigParser::Instance()->GetInt("log", "file_max_size"),
ConfigParser::Instance()->GetInt("log", "file_max_num")
);
AppLog::Instance()->SetLevel(
ConfigParser::Instance()->GetStr("log", "log_level")
);
m_tag = rand();
DEBUG_LOG("server.tag: %d", m_tag);
handleSignals();
return 0;
}
int setup() {
logging();
handleSignals();
monitor();
iobuffer();
loadModules();
kq = kqueue();
}
/* TODO Specialize this routine into init-time and loop-time versions?
e.g. bReadEkin is only true when restoring from checkpoint */
void compute_globals(FILE *fplog, gmx_global_stat *gstat, t_commrec *cr, t_inputrec *ir,
t_forcerec *fr, gmx_ekindata_t *ekind,
t_state *state, t_mdatoms *mdatoms,
t_nrnb *nrnb, t_vcm *vcm, gmx_wallcycle_t wcycle,
gmx_enerdata_t *enerd, tensor force_vir, tensor shake_vir, tensor total_vir,
tensor pres, rvec mu_tot, gmx_constr_t constr,
struct gmx_signalling_t *gs, gmx_bool bInterSimGS,
matrix box, int *totalNumberOfBondedInteractions,
gmx_bool *bSumEkinhOld, int flags)
{
tensor corr_vir, corr_pres;
gmx_bool bEner, bPres, bTemp;
gmx_bool bStopCM, bGStat,
bReadEkin, bEkinAveVel, bScaleEkin, bConstrain;
real prescorr, enercorr, dvdlcorr, dvdl_ekin;
/* translate CGLO flags to gmx_booleans */
bStopCM = flags & CGLO_STOPCM;
bGStat = flags & CGLO_GSTAT;
bReadEkin = (flags & CGLO_READEKIN);
bScaleEkin = (flags & CGLO_SCALEEKIN);
bEner = flags & CGLO_ENERGY;
bTemp = flags & CGLO_TEMPERATURE;
bPres = (flags & CGLO_PRESSURE);
bConstrain = (flags & CGLO_CONSTRAINT);
/* we calculate a full state kinetic energy either with full-step velocity verlet
or half step where we need the pressure */
bEkinAveVel = (ir->eI == eiVV || (ir->eI == eiVVAK && bPres) || bReadEkin);
/* in initalization, it sums the shake virial in vv, and to
sums ekinh_old in leapfrog (or if we are calculating ekinh_old) for other reasons */
/* ########## Kinetic energy ############## */
if (bTemp)
{
/* Non-equilibrium MD: this is parallellized, but only does communication
* when there really is NEMD.
*/
if (PAR(cr) && (ekind->bNEMD))
{
accumulate_u(cr, &(ir->opts), ekind);
}
if (!bReadEkin)
{
calc_ke_part(state, &(ir->opts), mdatoms, ekind, nrnb, bEkinAveVel);
}
}
/* Calculate center of mass velocity if necessary, also parallellized */
if (bStopCM)
{
calc_vcm_grp(0, mdatoms->homenr, mdatoms,
state->x, state->v, vcm);
}
if (bTemp || bStopCM || bPres || bEner || bConstrain)
{
if (!bGStat)
{
/* We will not sum ekinh_old,
* so signal that we still have to do it.
*/
*bSumEkinhOld = TRUE;
}
else
{
gmx::ArrayRef<real> signalBuffer = prepareSignalBuffer(gs);
if (PAR(cr))
{
wallcycle_start(wcycle, ewcMoveE);
global_stat(gstat, cr, enerd, force_vir, shake_vir, mu_tot,
ir, ekind, constr, bStopCM ? vcm : NULL,
signalBuffer.size(), signalBuffer.data(),
totalNumberOfBondedInteractions,
*bSumEkinhOld, flags);
wallcycle_stop(wcycle, ewcMoveE);
}
handleSignals(gs, cr, bInterSimGS);
*bSumEkinhOld = FALSE;
}
}
if (!ekind->bNEMD && debug && bTemp && (vcm->nr > 0))
{
correct_ekin(debug,
0, mdatoms->homenr,
state->v, vcm->group_p[0],
mdatoms->massT, mdatoms->tmass, ekind->ekin);
}
/* Do center of mass motion removal */
if (bStopCM)
{
check_cm_grp(fplog, vcm, ir, 1);
do_stopcm_grp(0, mdatoms->homenr, mdatoms->cVCM,
state->x, state->v, vcm);
inc_nrnb(nrnb, eNR_STOPCM, mdatoms->homenr);
}
if (bEner)
{
/* Calculate the amplitude of the cosine velocity profile */
ekind->cosacc.vcos = ekind->cosacc.mvcos/mdatoms->tmass;
}
if (bTemp)
{
/* Sum the kinetic energies of the groups & calc temp */
/* compute full step kinetic energies if vv, or if vv-avek and we are computing the pressure with inputrecNptTrotter */
/* three maincase: VV with AveVel (md-vv), vv with AveEkin (md-vv-avek), leap with AveEkin (md).
Leap with AveVel is not supported; it's not clear that it will actually work.
bEkinAveVel: If TRUE, we simply multiply ekin by ekinscale to get a full step kinetic energy.
If FALSE, we average ekinh_old and ekinh*ekinscale_nhc to get an averaged half step kinetic energy.
*/
enerd->term[F_TEMP] = sum_ekin(&(ir->opts), ekind, &dvdl_ekin,
bEkinAveVel, bScaleEkin);
enerd->dvdl_lin[efptMASS] = (double) dvdl_ekin;
enerd->term[F_EKIN] = trace(ekind->ekin);
}
/* ########## Long range energy information ###### */
if (bEner || bPres || bConstrain)
{
calc_dispcorr(ir, fr, box, state->lambda[efptVDW],
corr_pres, corr_vir, &prescorr, &enercorr, &dvdlcorr);
}
if (bEner)
{
enerd->term[F_DISPCORR] = enercorr;
enerd->term[F_EPOT] += enercorr;
enerd->term[F_DVDL_VDW] += dvdlcorr;
}
/* ########## Now pressure ############## */
if (bPres || bConstrain)
{
m_add(force_vir, shake_vir, total_vir);
/* Calculate pressure and apply LR correction if PPPM is used.
* Use the box from last timestep since we already called update().
*/
enerd->term[F_PRES] = calc_pres(fr->ePBC, ir->nwall, box, ekind->ekin, total_vir, pres);
/* Calculate long range corrections to pressure and energy */
/* this adds to enerd->term[F_PRES] and enerd->term[F_ETOT],
and computes enerd->term[F_DISPCORR]. Also modifies the
total_vir and pres tesors */
m_add(total_vir, corr_vir, total_vir);
m_add(pres, corr_pres, pres);
enerd->term[F_PDISPCORR] = prescorr;
enerd->term[F_PRES] += prescorr;
}
}
void KLineEdit::keyPressEvent( QKeyEvent *e )
{
KKey key( e );
if ( KStdAccel::copy().contains( key ) )
{
copy();
return;
}
else if ( KStdAccel::paste().contains( key ) )
{
paste();
return;
}
else if ( KStdAccel::pasteSelection().contains( key ) )
{
QString text = QApplication::clipboard()->text( QClipboard::Selection);
insert( text );
deselect();
return;
}
else if ( KStdAccel::cut().contains( key ) )
{
cut();
return;
}
else if ( KStdAccel::undo().contains( key ) )
{
undo();
return;
}
else if ( KStdAccel::redo().contains( key ) )
{
redo();
return;
}
else if ( KStdAccel::deleteWordBack().contains( key ) )
{
cursorWordBackward(true);
if ( hasSelectedText() )
del();
e->accept();
return;
}
else if ( KStdAccel::deleteWordForward().contains( key ) )
{
// Workaround for QT bug where
cursorWordForward(true);
if ( hasSelectedText() )
del();
e->accept();
return;
}
else if ( KStdAccel::backwardWord().contains( key ) )
{
cursorWordBackward(false);
e->accept();
return;
}
else if ( KStdAccel::forwardWord().contains( key ) )
{
cursorWordForward(false);
e->accept();
return;
}
else if ( KStdAccel::beginningOfLine().contains( key ) )
{
home(false);
e->accept();
return;
}
else if ( KStdAccel::endOfLine().contains( key ) )
{
end(false);
e->accept();
return;
}
// Filter key-events if EchoMode is normal and
// completion mode is not set to CompletionNone
if ( echoMode() == QLineEdit::Normal &&
completionMode() != KGlobalSettings::CompletionNone )
{
KeyBindingMap keys = getKeyBindings();
KGlobalSettings::Completion mode = completionMode();
bool noModifier = (e->state() == NoButton ||
e->state() == ShiftButton ||
e->state() == Keypad);
if ( (mode == KGlobalSettings::CompletionAuto ||
mode == KGlobalSettings::CompletionPopupAuto ||
mode == KGlobalSettings::CompletionMan) && noModifier )
{
if ( !d->userSelection && hasSelectedText() &&
( e->key() == Key_Right || e->key() == Key_Left ) &&
e->state()==NoButton )
{
QString old_txt = text();
d->disableRestoreSelection = true;
int start,end;
getSelection(&start, &end);
deselect();
QLineEdit::keyPressEvent ( e );
int cPosition=cursorPosition();
if (e->key() ==Key_Right && cPosition > start )
validateAndSet(old_txt, cPosition, cPosition, old_txt.length());
else
validateAndSet(old_txt, cPosition, start, old_txt.length());
d->disableRestoreSelection = false;
return;
}
if ( e->key() == Key_Escape )
{
if (hasSelectedText() && !d->userSelection )
{
del();
setUserSelection(true);
}
// Don't swallow the Escape press event for the case
// of dialogs, which have Escape associated to Cancel
e->ignore();
return;
}
}
if ( (mode == KGlobalSettings::CompletionAuto ||
mode == KGlobalSettings::CompletionMan) && noModifier )
{
QString keycode = e->text();
if ( !keycode.isEmpty() && (keycode.unicode()->isPrint() ||
e->key() == Key_Backspace || e->key() == Key_Delete ) )
{
bool hasUserSelection=d->userSelection;
bool hadSelection=hasSelectedText();
bool cursorNotAtEnd=false;
int start,end;
getSelection(&start, &end);
int cPos = cursorPosition();
// When moving the cursor, we want to keep the autocompletion as an
// autocompletion, so we want to process events at the cursor position
// as if there was no selection. After processing the key event, we
// can set the new autocompletion again.
if ( hadSelection && !hasUserSelection && start>cPos )
{
del();
setCursorPosition(cPos);
cursorNotAtEnd=true;
}
d->disableRestoreSelection = true;
QLineEdit::keyPressEvent ( e );
d->disableRestoreSelection = false;
QString txt = text();
int len = txt.length();
if ( !hasSelectedText() && len /*&& cursorPosition() == len */)
{
if ( e->key() == Key_Backspace )
{
if ( hadSelection && !hasUserSelection && !cursorNotAtEnd )
{
backspace();
txt = text();
len = txt.length();
}
if ( !d->backspacePerformsCompletion || !len )
d->autoSuggest = false;
}
if (e->key() == Key_Delete )
d->autoSuggest=false;
if ( emitSignals() )
emit completion( txt );
if ( handleSignals() )
makeCompletion( txt );
if( (e->key() == Key_Backspace || e->key() == Key_Delete) )
d->autoSuggest=true;
e->accept();
}
return;
}
}
else if (( mode == KGlobalSettings::CompletionPopup ||
mode == KGlobalSettings::CompletionPopupAuto ) &&
noModifier && !e->text().isEmpty() )
{
QString old_txt = text();
bool hasUserSelection=d->userSelection;
bool hadSelection=hasSelectedText();
bool cursorNotAtEnd=false;
int start,end;
getSelection(&start, &end);
int cPos = cursorPosition();
QString keycode = e->text();
// When moving the cursor, we want to keep the autocompletion as an
// autocompletion, so we want to process events at the cursor position
// as if there was no selection. After processing the key event, we
// can set the new autocompletion again.
if (hadSelection && !hasUserSelection && start>cPos &&
( (!keycode.isEmpty() && keycode.unicode()->isPrint()) ||
e->key() == Key_Backspace || e->key() == Key_Delete ) )
{
del();
setCursorPosition(cPos);
cursorNotAtEnd=true;
}
uint selectedLength=selectedText().length();
d->disableRestoreSelection = true;
QLineEdit::keyPressEvent ( e );
d->disableRestoreSelection = false;
if (( selectedLength != selectedText().length() ) && !hasUserSelection )
slotRestoreSelectionColors(); // and set userSelection to true
QString txt = text();
int len = txt.length();
if ( txt != old_txt && len/* && ( cursorPosition() == len || force )*/ &&
( (!keycode.isEmpty() && keycode.unicode()->isPrint()) ||
e->key() == Key_Backspace || e->key() == Key_Delete) )
{
if ( e->key() == Key_Backspace )
{
if ( hadSelection && !hasUserSelection && !cursorNotAtEnd )
{
backspace();
txt = text();
len = txt.length();
}
if ( !d->backspacePerformsCompletion )
d->autoSuggest = false;
}
if (e->key() == Key_Delete )
d->autoSuggest=false;
if ( d->completionBox )
d->completionBox->setCancelledText( txt );
if ( emitSignals() )
emit completion( txt ); // emit when requested...
if ( handleSignals() ) {
makeCompletion( txt ); // handle when requested...
}
if ( (e->key() == Key_Backspace || e->key() == Key_Delete ) &&
mode == KGlobalSettings::CompletionPopupAuto )
d->autoSuggest=true;
e->accept();
}
else if (!len && d->completionBox && d->completionBox->isVisible())
d->completionBox->hide();
return;
}
else if ( mode == KGlobalSettings::CompletionShell )
{
// Handles completion.
KShortcut cut;
if ( keys[TextCompletion].isNull() )
cut = KStdAccel::shortcut(KStdAccel::TextCompletion);
else
cut = keys[TextCompletion];
if ( cut.contains( key ) )
{
// Emit completion if the completion mode is CompletionShell
// and the cursor is at the end of the string.
QString txt = text();
int len = txt.length();
if ( cursorPosition() == len && len != 0 )
{
if ( emitSignals() )
emit completion( txt );
if ( handleSignals() )
makeCompletion( txt );
return;
}
}
else if ( d->completionBox )
d->completionBox->hide();
}
// handle rotation
if ( mode != KGlobalSettings::CompletionNone )
{
// Handles previous match
KShortcut cut;
if ( keys[PrevCompletionMatch].isNull() )
cut = KStdAccel::shortcut(KStdAccel::PrevCompletion);
else
cut = keys[PrevCompletionMatch];
if ( cut.contains( key ) )
{
if ( emitSignals() )
emit textRotation( KCompletionBase::PrevCompletionMatch );
if ( handleSignals() )
rotateText( KCompletionBase::PrevCompletionMatch );
return;
}
// Handles next match
if ( keys[NextCompletionMatch].isNull() )
cut = KStdAccel::shortcut(KStdAccel::NextCompletion);
else
cut = keys[NextCompletionMatch];
if ( cut.contains( key ) )
{
if ( emitSignals() )
emit textRotation( KCompletionBase::NextCompletionMatch );
if ( handleSignals() )
rotateText( KCompletionBase::NextCompletionMatch );
return;
}
}
// substring completion
if ( compObj() )
{
KShortcut cut;
if ( keys[SubstringCompletion].isNull() )
cut = KStdAccel::shortcut(KStdAccel::SubstringCompletion);
else
cut = keys[SubstringCompletion];
if ( cut.contains( key ) )
{
if ( emitSignals() )
emit substringCompletion( text() );
if ( handleSignals() )
{
setCompletedItems( compObj()->substringCompletion(text()));
e->accept();
}
return;
}
}
}
uint selectedLength = selectedText().length();
// Let QLineEdit handle any other keys events.
QLineEdit::keyPressEvent ( e );
if ( selectedLength != selectedText().length() )
slotRestoreSelectionColors(); // and set userSelection to true
}