Exemple #1
0
struct trackDb *hubCollectTracks( char *database,  struct grp **pGroupList)
/* Generate trackDb structures for all the tracks in attached hubs.  
 * Make grp structures for each hub. Returned group list is reversed. */
{
// return the cached copy if it exists
static struct trackDb *hubTrackDbs;
static struct grp *hubGroups;

if (hubTrackDbs != NULL)
    {
    if (pGroupList != NULL)
	*pGroupList = hubGroups;
    return hubTrackDbs;
    }

struct hubConnectStatus *hub, *hubList =  hubConnectGetHubs();
struct trackDb *tdbList = NULL;
for (hub = hubList; hub != NULL; hub = hub->next)
    {
    if (isEmpty(hub->errorMessage))
	{
        /* error catching in so it won't just abort  */
        struct errCatch *errCatch = errCatchNew();
        if (errCatchStart(errCatch))
	    {
	    struct trackDb *thisList = hubAddTracks(hub, database);
	    tdbList = slCat(tdbList, thisList);
	    }
        errCatchEnd(errCatch);
        if (errCatch->gotError)
	    {
	    warn("%s", errCatch->message->string);
	    hubUpdateStatus( errCatch->message->string, hub);
	    }
	else
	    {
	    if (!trackHubDatabase(database))
		{
		struct grp *grp = grpFromHub(hub);
		slAddHead(&hubGroups, grp);
		}
	    hubUpdateStatus(NULL, hub);
	    }

        errCatchFree(&errCatch);
	}
    }

hubTrackDbs = tdbList;
if (pGroupList != NULL)
    *pGroupList = hubGroups;
return tdbList;
}
Exemple #2
0
static void checkTrackDbs(struct hubConnectStatus *hubList)
{
struct hubConnectStatus *hub = hubList;

for(; hub; hub = hub->next)
    {
    struct errCatch *errCatch = errCatchNew();
    if (errCatchStart(errCatch))
	{
	hubAddTracks(hub, database);
	}
    errCatchEnd(errCatch);
    if (errCatch->gotError)
	{
	hub->errorMessage = cloneString(errCatch->message->string);
	hubUpdateStatus( errCatch->message->string, hub);
	}
    else
	hubUpdateStatus(NULL, hub);
    }
}