int _miteNtxfCopy(miteRender *mrr, miteUser *muu) { static const char me[]="_miteNtxfCopy"; int ni, E; mrr->ntxf = AIR_CALLOC(muu->ntxfNum, Nrrd *); if (!mrr->ntxf) { biffAddf(MITE, "%s: couldn't calloc %d ntxf pointers", me, muu->ntxfNum); return 1; } mrr->ntxfNum = muu->ntxfNum; airMopAdd(mrr->rmop, mrr->ntxf, airFree, airMopAlways); E = 0; for (ni=0; ni<mrr->ntxfNum; ni++) { mrr->ntxf[ni] = nrrdNew(); if (!E) airMopAdd(mrr->rmop, mrr->ntxf[ni], (airMopper)nrrdNuke, airMopAlways); if (!( nrrdTypeUChar == muu->ntxf[ni]->type || nrrdTypeFloat == muu->ntxf[ni]->type || nrrdTypeDouble == muu->ntxf[ni]->type )) { biffAddf(MITE, "%s: sorry, can't handle txf of type %s (only %s, %s, %s)", me, airEnumStr(nrrdType, muu->ntxf[ni]->type), airEnumStr(nrrdType, nrrdTypeUChar), airEnumStr(nrrdType, nrrdTypeFloat), airEnumStr(nrrdType, nrrdTypeDouble)); return 1; } /* note that key/values need to be copied for the sake of identifying a non-default miteStageOp */ switch(muu->ntxf[ni]->type) { case nrrdTypeUChar: if (!E) E |= nrrdUnquantize(mrr->ntxf[ni], muu->ntxf[ni], nrrdTypeUChar); if (!E) E |= nrrdKeyValueCopy(mrr->ntxf[ni], muu->ntxf[ni]); break; case mite_nt: if (!E) E |= nrrdCopy(mrr->ntxf[ni], muu->ntxf[ni]); break; default: /* will be either float or double (whatever mite_nt isn't) */ if (!E) E |= nrrdConvert(mrr->ntxf[ni], muu->ntxf[ni], mite_nt); if (!E) E |= nrrdKeyValueCopy(mrr->ntxf[ni], muu->ntxf[ni]); break; } } if (E) { biffMovef(MITE, NRRD, "%s: troubling copying/converting all ntxfs", me); return 1; } return 0; }
int main() { airArray *mop, *submop; char *err; int typi; unsigned int supi, probePass, cti /* context copy index */, pvlIdx[NRRD_TYPE_MAX+1], sx, sy, sz, subnum; size_t sizes[3] = {42,61,50} /* one of these must be even */, ii, nn; Nrrd *norigScl, *nucharScl, *nunquant, *nqdiff, *nconvScl[NRRD_TYPE_MAX+1]; unsigned char *ucharScl; gageContext *gctx[2][KERN_SIZE_MAX+1]; gagePerVolume *gpvl[2][NRRD_TYPE_MAX+1][KERN_SIZE_MAX+1]; const double *vansScl[2][NRRD_TYPE_MAX+1][KERN_SIZE_MAX+1], *gansScl[2][NRRD_TYPE_MAX+1][KERN_SIZE_MAX+1], *hansScl[2][NRRD_TYPE_MAX+1][KERN_SIZE_MAX+1]; double *origScl, omin, omax, dsx, dsy, dsz, spcOrig[NRRD_SPACE_DIM_MAX] = {0.0, 0.0, 0.0}, spcVec[3][NRRD_SPACE_DIM_MAX] = { {1.1, 0.0, 0.0}, {0.0, 2.2, 0.0}, {0.0, 0.0, 3.3}}; mop = airMopNew(); #define NRRD_NEW(name, mop) \ (name) = nrrdNew(); \ airMopAdd((mop), (name), (airMopper)nrrdNuke, airMopAlways) /* --------------------------------------------------------------- */ /* Creating initial volume */ NRRD_NEW(norigScl, mop); if (nrrdMaybeAlloc_nva(norigScl, nrrdTypeDouble, 3, sizes)) { airMopAdd(mop, err = biffGetDone(NRRD), airFree, airMopAlways); fprintf(stderr, "trouble allocating:\n%s", err); airMopError(mop); return 1; } origScl = AIR_CAST(double *, norigScl->data); nn = nrrdElementNumber(norigScl); airSrandMT(42*42); for (ii=0; ii<nn/2; ii++) { airNormalRand(origScl + 2*ii + 0, origScl + 2*ii + 1); } /* learn real range */ omin = omax = origScl[0]; for (ii=1; ii<nn; ii++) { omin = AIR_MIN(omin, origScl[ii]); omax = AIR_MAX(omax, origScl[ii]); } ELL_3V_SET(spcOrig, 0.0, 0.0, 0.0); if (nrrdSpaceSet(norigScl, nrrdSpaceRightAnteriorSuperior) || nrrdSpaceOriginSet(norigScl, spcOrig)) { airMopAdd(mop, err = biffGetDone(NRRD), airFree, airMopAlways); fprintf(stderr, "trouble setting space:\n%s", err); airMopError(mop); return 1; } nrrdAxisInfoSet_nva(norigScl, nrrdAxisInfoSpaceDirection, spcVec); dsx = AIR_CAST(double, sizes[0]); dsy = AIR_CAST(double, sizes[1]); dsz = AIR_CAST(double, sizes[2]); sx = AIR_CAST(unsigned int, sizes[0]); sy = AIR_CAST(unsigned int, sizes[1]); sz = AIR_CAST(unsigned int, sizes[2]); subnum = AIR_CAST(unsigned int, PROBE_NUM*0.9); /* --------------------------------------------------------------- */ /* Quantizing to 8-bits and checking */ submop = airMopNew(); NRRD_NEW(nucharScl, mop); NRRD_NEW(nunquant, submop); NRRD_NEW(nqdiff, submop); if (nrrdQuantize(nucharScl, norigScl, NULL, 8) || nrrdUnquantize(nunquant, nucharScl, nrrdTypeDouble) || nrrdArithBinaryOp(nqdiff, nrrdBinaryOpSubtract, norigScl, nunquant)) { airMopAdd(mop, err = biffGetDone(NRRD), airFree, airMopAlways); fprintf(stderr, "trouble quantizing and back:\n%s", err); airMopError(submop); airMopError(mop); return 1; } if (!( nucharScl->oldMin == omin && nucharScl->oldMax == omax )) { fprintf(stderr, "quantization range [%g,%g] != real range [%g,%g]\n", nucharScl->oldMin, nucharScl->oldMax, omin, omax); airMopError(submop); airMopError(mop); return 1; } { double *qdiff, *unquant; /* empirically determined tolerance, which had to be increased in order to work under valgrind (!)- perhaps because of a difference in the use of 80-bit registers */ double epsilon=0.50000000000004; qdiff = AIR_CAST(double *, nqdiff->data); unquant = AIR_CAST(double *, nunquant->data); for (ii=0; ii<nn; ii++) { double dd; /* with infinite precision, the max difference between original and quantized values should be exactly half the width (in value) of 1/256 of value range ==> dd = 0.5 */ dd = qdiff[ii]*256/(omax - omin); if (AIR_ABS(dd) > epsilon) { unsigned int ui; ui = AIR_CAST(unsigned int, ii); fprintf(stderr, "|orig[%u]=%.17g - unquant=%.17g|*256/%.17g " "= %.17g > %.17g!\n", ui, origScl[ii], unquant[ii], omax - omin, AIR_ABS(dd), epsilon); airMopError(submop); airMopError(mop); return 1; } } }