Exemple #1
0
int main(int argc, char **argv){
  int np[3], m, window;
  unsigned window_flag;
  ptrdiff_t N[3], n[3], local_M;
  double f_hat_sum, x_max[3];
  pnfft_complex *f1, *f2;
  
  MPI_Init(&argc, &argv);
  pnfft_init();
  
  /* set default values */
  N[0] = N[1] = N[2] = 16;
  n[0] = n[1] = n[2] = 0;
  local_M = 0;
  m = 6;
  window = 4;
  x_max[0] = x_max[1] = x_max[2] = 0.5;
  np[0]=2; np[1]=2; np[2]=2;
  
  /* set parameters by command line */
  init_parameters(argc, argv, N, n, &local_M, &m, &window, x_max, np);

  /* if M or n are set to zero, we choose nice values */
  local_M = (local_M==0) ? N[0]*N[1]*N[2]/(np[0]*np[1]*np[2]) : local_M;
  for(int t=0; t<3; t++)
    n[t] = (n[t]==0) ? 2*N[t] : n[t];

  switch(window){
    case 0: window_flag = PNFFT_WINDOW_GAUSSIAN; break;
    case 1: window_flag = PNFFT_WINDOW_BSPLINE; break;
    case 2: window_flag = PNFFT_WINDOW_SINC_POWER; break;
    case 3: window_flag = PNFFT_WINDOW_BESSEL_I0; break;
    default: window_flag = PNFFT_WINDOW_KAISER_BESSEL;
  }

  pfft_printf(MPI_COMM_WORLD, "******************************************************************************************************\n");
  pfft_printf(MPI_COMM_WORLD, "* Computation of parallel NFFT\n");
  pfft_printf(MPI_COMM_WORLD, "* for  N[0] x N[1] x N[2] = %td x %td x %td Fourier coefficients (change with -pnfft_N * * *)\n", N[0], N[1], N[2]);
  pfft_printf(MPI_COMM_WORLD, "* at   local_M = %td nodes per process (change with -pnfft_local_M *)\n", local_M);
  pfft_printf(MPI_COMM_WORLD, "* with n[0] x n[1] x n[2] = %td x %td x %td FFT grid size (change with -pnfft_n * * *),\n", n[0], n[1], n[2]);
  pfft_printf(MPI_COMM_WORLD, "*      m = %d real space cutoff (change with -pnfft_m *),\n", m);
  pfft_printf(MPI_COMM_WORLD, "*      window = %d window function ", window);
  switch(window){
    case 0: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_GAUSSIAN) "); break;
    case 1: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_BSPLINE) "); break;
    case 2: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_SINC_POWER) "); break;
    case 3: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_BESSEL_I0) "); break;
    default: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_KAISER_BESSEL) "); break;
  }
  pfft_printf(MPI_COMM_WORLD, "(change with -pnfft_window *),\n");
  pfft_printf(MPI_COMM_WORLD, "* on   np[0] x np[1] x np[2] = %td x %td x %td processes (change with -pnfft_np * * *)\n", np[0], np[1], np[2]);
  pfft_printf(MPI_COMM_WORLD, "*******************************************************************************************************\n\n");


  /* calculate parallel NFFT */
  pnfft_perform_guru(N, n, local_M, m,   x_max, window_flag, np, MPI_COMM_WORLD,
      &f1, &f_hat_sum);

  /* calculate parallel NFFT with higher accuracy */
  pnfft_perform_guru(N, n, local_M, m+2, x_max, PNFFT_WINDOW_KAISER_BESSEL, np, MPI_COMM_WORLD,
      &f2, &f_hat_sum);

  /* calculate error of PNFFT */
  compare_f(f1, f2, local_M, f_hat_sum, "* Results in", MPI_COMM_WORLD);

  /* free mem and finalize */
  pnfft_free(f1); pnfft_free(f2);
  pnfft_cleanup();
  MPI_Finalize();
  return 0;
}
Exemple #2
0
int main(int argc, char **argv){
  int np[3];
  ptrdiff_t N[3], local_M;
  ptrdiff_t local_N[3], local_N_start[3];
  double lower_border[3], upper_border[3];
  MPI_Comm comm_cart_3d;
  pnfft_complex *f_hat, *f;
  double *x;
  pnfft_plan pnfft;
  
  MPI_Init(&argc, &argv);
  pnfft_init();
  
  /* Set default values */
  N[0] = N[1] = N[2] = 16;
  np[0]=2; np[1]=2; np[2]=2;
  local_M = N[0]*N[1]*N[2]/(np[0]*np[1]*np[2]);
  
  /* Print infos */
  pfft_printf(MPI_COMM_WORLD, "******************************************************************************************************\n");
  pfft_printf(MPI_COMM_WORLD, "* Computation of parallel NFFT\n");
  pfft_printf(MPI_COMM_WORLD, "* for  N[0] x N[1] x N[2] = %td x %td x %td Fourier coefficients\n", N[0], N[1], N[2]);
  pfft_printf(MPI_COMM_WORLD, "* at   local_M = %td nodes per process\n", local_M);
  pfft_printf(MPI_COMM_WORLD, "* on   np[0] x np[1] x np[2] = %td x %td x %td processes\n", np[0], np[1], np[2]);
  pfft_printf(MPI_COMM_WORLD, "*******************************************************************************************************\n\n");

  /* create three-dimensional process grid of size np[0] x np[1] x np[2], if possible */
  if( pnfft_create_procmesh(3, MPI_COMM_WORLD, np, &comm_cart_3d) ){
    pfft_fprintf(MPI_COMM_WORLD, stderr, "Error: Procmesh of size %d x %d x %d does not fit to number of allocated processes.\n", np[0], np[1], np[2]);
    pfft_fprintf(MPI_COMM_WORLD, stderr, "       Please allocate %d processes (mpiexec -np %d ...) or change the procmesh (with -pnfft_np * * *).\n", np[0]*np[1]*np[2], np[0]*np[1]*np[2]);
    MPI_Finalize();
    return 1;
  }

  /* Get parameters of data distribution */
  pnfft_local_size_3d(N, comm_cart_3d, PNFFT_TRANSPOSED_NONE,
      local_N, local_N_start, lower_border, upper_border);

  /* Plan parallel NFFT */
  pnfft = pnfft_init_3d(N, local_M, comm_cart_3d);

  /* Get data pointers */
  f_hat = pnfft_get_f_hat(pnfft);
  f     = pnfft_get_f(pnfft);
  x     = pnfft_get_x(pnfft);

  /* Initialize Fourier coefficients */
  pnfft_init_f_hat_3d(N, local_N, local_N_start, PNFFT_TRANSPOSED_NONE,
      f_hat);

  /* Initialize nonequispaced nodes */
  init_random_x(lower_border, upper_border, local_M,
      x);

  /* Print input Fourier coefficents */
  vpr_complex(comm_cart_3d, 8, f_hat,
      "Input Fourier coefficients on process 1:");

  /* Execute parallel NFFT */
  pnfft_trafo(pnfft);

  /* Print NFFT results */
  vpr_complex(comm_cart_3d, 8, f,
      "PNFFT Results on process 1:");

  /* Execute parallel adjoint NFFT */
  pnfft_adj(pnfft);

  /* Scale data */
  for(ptrdiff_t l=0; l < local_N[0] * local_N[1] * local_N[2]; l++)
    f_hat[l] /= (N[0]*N[1]*N[2]);

  /* Print output Fourier coefficents */
  vpr_complex(comm_cart_3d, 8, f_hat,
      "Fourier coefficients after one forward and backward PNFFT on process 1:");

  /* free mem and finalize */
  pnfft_finalize(pnfft, PNFFT_FREE_X | PNFFT_FREE_F_HAT| PNFFT_FREE_F);
  MPI_Comm_free(&comm_cart_3d);
  pnfft_cleanup();
  MPI_Finalize();
  return 0;
}
Exemple #3
0
int main(int argc, char **argv){
  int np[3], m, window, interlacing;
  ptrdiff_t N[3], n[3], local_M;
  double x_max[3];
  
  MPI_Init(&argc, &argv);
  pnfft_init();
  
  /* set default values */
  N[0] = N[1] = N[2] = 16;
  n[0] = n[1] = n[2] = 0;
  local_M = 0;
  m = 6;
  window = 4;
  interlacing = 0;
  x_max[0] = x_max[1] = x_max[2] = 0.5;
  np[0]=2; np[1]=2; np[2]=2;
  
  /* set parameters by command line */
  int intpol = -1;
  init_parameters(argc, argv, N, n, &local_M, &m, &window, &intpol, &interlacing, x_max, np);

  /* if M or n are set to zero, we choose nice values */
  local_M = (local_M==0) ? N[0]*N[1]*N[2]/(np[0]*np[1]*np[2]) : local_M;
  for(int t=0; t<3; t++)
    n[t] = (n[t]==0) ? 2*N[t] : n[t];

  unsigned window_flag;
  switch(window){
    case 0: window_flag = PNFFT_WINDOW_GAUSSIAN; break;
    case 1: window_flag = PNFFT_WINDOW_BSPLINE; break;
    case 2: window_flag = PNFFT_WINDOW_SINC_POWER; break;
    case 3: window_flag = PNFFT_WINDOW_BESSEL_I0; break;
    case 4: window_flag = PNFFT_WINDOW_KAISER_BESSEL; break;
    case 5: window_flag = PNFFT_WINDOW_GAUSSIAN_T; break;
    default: window_flag = PNFFT_WINDOW_GAUSSIAN; window = 0;
  }

  unsigned intpol_flag;
  switch(intpol){
    case 0: intpol_flag = PNFFT_PRE_CONST_PSI; break;
    case 1: intpol_flag = PNFFT_PRE_LIN_PSI; break;
    case 2: intpol_flag = PNFFT_PRE_QUAD_PSI; break;
    case 3: intpol_flag = PNFFT_PRE_CUB_PSI; break;
    default: intpol_flag = (window==0) ? PNFFT_FG_PSI : 0;
  }

  unsigned interlacing_flag = (interlacing) ? PNFFT_INTERLACED : 0;

  pfft_printf(MPI_COMM_WORLD, "******************************************************************************************************\n");
  pfft_printf(MPI_COMM_WORLD, "* Computation of parallel NFFT\n");
  pfft_printf(MPI_COMM_WORLD, "* for  N[0] x N[1] x N[2] = %td x %td x %td Fourier coefficients (change with -pnfft_N * * *)\n", N[0], N[1], N[2]);
  pfft_printf(MPI_COMM_WORLD, "* at   local_M = %td nodes per process (change with -pnfft_local_M *)\n", local_M);
  pfft_printf(MPI_COMM_WORLD, "* with n[0] x n[1] x n[2] = %td x %td x %td FFT grid size (change with -pnfft_n * * *),\n", n[0], n[1], n[2]);
  pfft_printf(MPI_COMM_WORLD, "*      m = %d real space cutoff (change with -pnfft_m *),\n", m);
  pfft_printf(MPI_COMM_WORLD, "*      window = %d window function ", window);
  switch(window){
    case 0: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_GAUSSIAN) "); break;
    case 1: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_BSPLINE) "); break;
    case 2: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_SINC_POWER) "); break;
    case 3: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_BESSEL_I0) "); break;
    case 4: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_KAISER_BESSEL) "); break;
    case 5: pfft_printf(MPI_COMM_WORLD, "(PNFFT_WINDOW_GAUSSIAN_T) "); break;
  }
  pfft_printf(MPI_COMM_WORLD, "(change with -pnfft_window *),\n");
  pfft_printf(MPI_COMM_WORLD, "*      intpol = %d interpolation order ", intpol);
  switch(intpol){
    case 0: pfft_printf(MPI_COMM_WORLD, "(PNFFT_PRE_CONST_PSI) "); break;
    case 1: pfft_printf(MPI_COMM_WORLD, "(PNFFT_PRE_LIN_PSI) "); break;
    case 2: pfft_printf(MPI_COMM_WORLD, "(PNFFT_PRE_QUAD_PSI) "); break;
    case 3: pfft_printf(MPI_COMM_WORLD, "(PNFFT_PRE_CUB_PSI) "); break;
    default: if(window==0 || window==5)
               pfft_printf(MPI_COMM_WORLD, "(PNFFT_FG_PSI) ");
             else
               pfft_printf(MPI_COMM_WORLD, "(No interpolation enabled) ");
  }
  pfft_printf(MPI_COMM_WORLD, "(change with -pnfft_intpol *),\n");
  if(interlacing)
    pfft_printf(MPI_COMM_WORLD, "*      interlacing = enabled (disable with -pnfft_interlacing 0)");
  else
    pfft_printf(MPI_COMM_WORLD, "*      interlacing = disabled (enable with -pnfft_interlacing 1)");
  pfft_printf(MPI_COMM_WORLD, "* on   np[0] x np[1] x np[2] = %td x %td x %td processes (change with -pnfft_np * * *)\n", np[0], np[1], np[2]);
  pfft_printf(MPI_COMM_WORLD, "*******************************************************************************************************\n\n");


  /* calculate parallel NFFT */
  pnfft_perform_guru(N, n, local_M, m,   x_max, window_flag| intpol_flag| interlacing_flag, np, MPI_COMM_WORLD);

  /* free mem and finalize */
  pnfft_cleanup();
  MPI_Finalize();
  return 0;
}