/*
 * Routine to add dimensions and associated coordinate variables
 * to cudims and cuvars.
 * Also updates numbers of dims and vars
 */
int pp_add_dims_and_coord_vars(
       PPlist *xaxes, PPlist *yaxes, PPlist *zaxes, PPlist *taxes, int tmdimid, 
       CuDim *cudims, CuVar *cuvars, int *ndimsp, int *nvarsp, 
       PPlist *heaplist)
{
  PPlist *axislist;
  PPaxistype axistype;
  int idim; /* dim number of given type */
  int dimid;
  int varid;
  PPlisthandle handle;
  PPgenaxis *axis;  /*JAK 2005-01-10 */
  CuDim *dim;
  CuVar *var;
  /* PPdim *ppdim; */
  PPvar *ppvar;
  char dimnamestem[CU_MAX_NAME], units[CU_MAX_NAME];
  char *varnamea, *varnameb;
  char formulaterms[MAX_ATT_LEN+1];
  PPlist *catts;

  varid = *nvarsp;
  dimid = *ndimsp;

  for (axistype = 0; axistype < num_axistype; axistype++) {
    switch(axistype){
    case xaxistype: axislist = xaxes; break;
    case yaxistype: axislist = yaxes; break;
    case zaxistype: axislist = zaxes; break;
    case taxistype: axislist = taxes; break;
    default: pp_switch_bug("cdunifpp_process");
    }
    pp_list_startwalk(axislist, &handle);
    idim = 0;

    while ((axis = pp_list_walk(&handle, 0)) != NULL) {
      dim = &cudims[dimid];
      var = &cuvars[varid];
      /* ppdim = (PPdim*) dim->internp; */
      ppvar = (PPvar*) var->internp;
      
      dim->coord = var;

      axis->dimid = dimid;
      dim->len = pp_genaxis_len(axis);
      CKP(  ppvar->data = pp_genaxis_getCF(axis, dimnamestem, units, ppvar->atts, heaplist)  );
      sprintf(dim->name, dimnamestem, idim);
      if (units != NULL) {
	strncpy(dim->units, units, CU_MAX_NAME);
	dim->units[CU_MAX_NAME] = '\0';
      }
      strncpy(var->name, dim->name, CU_MAX_NAME);
      var->name[CU_MAX_NAME] = '\0';
      var->ndims = 1;
      var->dims[0] = dimid;
      varid++;
      /* now add certain variables for hybrid_sigmap z axis */
      if (axistype == zaxistype && pp_zaxis_lev_type(axis) == hybrid_sigmap_lev_type) {
      
	catts = ppvar->atts; /* attribute list for the main coord var */

	/* Hybrid sigma-p A coefficient */
	var = &cuvars[varid];
	ppvar = (PPvar*) var->internp;
	sprintf(var->name, "z%d_hybrid_sigmap_acoeff", idim);
	varnamea = var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis, hybrid_sigmap_a_type, heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts, "units", "Pa", heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts, "long_name", 
				 "atmospheric hybrid sigma-pressure 'A' coefficient", heaplist)   );
	var->ndims = 1;
	var->dims[0] = dimid;
	varid++;

	/* Hybrid sigma-p B coefficient */
	var = &cuvars[varid];
	ppvar = (PPvar*) var->internp;
	sprintf(var->name, "z%d_hybrid_sigmap_bcoeff", idim);
	varnameb = var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis, hybrid_sigmap_b_type, heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts, "long_name", 
				 "atmospheric hybrid sigma-pressure 'B' coefficient", heaplist)   );
	var->ndims = 1;
	var->dims[0] = dimid;
	varid++;
	
	snprintf(formulaterms, MAX_ATT_LEN, "ap: %s b: %s ps: ps p0: p0", varnamea, varnameb);

	CKI(   pp_add_string_att(catts, "formula_terms", formulaterms, heaplist)   );
	CKI(   pp_add_string_att(catts, "standard_name", "atmosphere_hybrid_sigma_pressure_coordinate", heaplist)   );

	CKI(   pp_add_string_att(catts, "comments", 
				 "The \"ps\" term in formula_terms is set to \"ps\" variable. "
				 "This variable may or may not be provided.", heaplist)   );
      }

      /* now add certain variables for hybrid_height z axis */
      if (axistype == zaxistype && pp_zaxis_lev_type(axis) == hybrid_height_lev_type) {
      
	catts = ppvar->atts; /* attribute list for the main coord var */

	/* Hybrid height A coefficient */
	var = &cuvars[varid];
	ppvar = (PPvar*) var->internp;
	sprintf(var->name, "z%d_hybrid_height_acoeff", idim);
	varnamea = var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis, hybrid_height_a_type, heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts, "units", "m", heaplist)   );
	var->ndims = 1;
	var->dims[0] = dimid;
	varid++;

	/* Hybrid height B coefficient */
	var = &cuvars[varid];
	ppvar = (PPvar*) var->internp;
	sprintf(var->name, "z%d_hybrid_height_bcoeff", idim);
	varnameb = var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis, hybrid_height_b_type, heaplist)   );
	var->ndims = 1;
	var->dims[0] = dimid;
	varid++;
	
	snprintf(formulaterms, MAX_ATT_LEN, "a: %s b: %s orog: orography", varnamea, varnameb);

	CKI(   pp_add_string_att(catts, "formula_terms", formulaterms, heaplist)   );
	CKI(   pp_add_string_att(catts, "standard_name", "atmosphere_hybrid_sigma_pressure_coordinate", heaplist)   );

	CKI(   pp_add_string_att(catts, "comments", 
				 "The \"orog\" term in formula_terms is set to \"orography\" variable. "
				 "This variable may or may not be provided.", heaplist)   );
      }


      /* add the boundary variable for time mean */
      if (axistype == taxistype && pp_taxis_is_time_mean(axis)) {
	catts = ppvar->atts; /* attribute list for the main coord var */

	var = &cuvars[varid];
	ppvar = (PPvar*) var->internp;
	sprintf(var->name, "time_bnd%d", idim);
	CKP(   ppvar->data = pp_taxis_to_boundary_values(axis->axis, heaplist)   );
	var->ndims = 2;
	var->dims[0] = dimid;
	var->dims[1] = tmdimid;
	
	CKI(   pp_add_string_att(catts, "bounds", var->name, heaplist)   );

	varid++;
      }
      dimid++;
      idim++;      
    } /* end loop over axes of given */
  } /* end loop over axis types */

  *nvarsp = varid;
  *ndimsp = dimid;
  return 0;

  

  ERRBLKI("pp_add_dims_and_coord_vars");
}
Exemple #2
0
int pp_process(CuFile *file)
{
  int rec, nrec, at_start_rec, at_end_rec;
  PPfile *ppfile;
  PPfieldvar *fvar;
  PPrec *recp;
  PPhdr *hdrp;
  PPgenaxis *xaxis, *yaxis, *zaxis, *taxis; /* JAK 2005-01-05 */
  PPlist *heaplist;
  PPlist *fieldvars;
  PPlisthandle handle, thandle;
  PPlist *gatts, *catts;

  int ndims, dimid;
  int idim; /* dim number of given type */
  int have_time_mean, tmdimid; /* dimensions used for meaning (CF cell methods) */
  CuDim *cudims,*dim;
  PPdim *ppdim;

  int nvars, varid, cvarid;
  int ncvars; /* coord vars */
  int nfvars; /* field vars */  
  int nvrec;  
  PPrec **recs, **vrecs;
  CuVar *cuvars, *var;  
  PPvar *ppvar;
  PPlist *atts;
  PPlist *axislist;
  PPlist *xaxes, *yaxes, *taxes, *zaxes; /* JAK 2005-01-05 */
  PPgenaxis *axis;  /*JAK 2005-01-10 */
  int have_hybrid_sigmap;
  PPaxistype axistype;
  
  int rotmapid, rotgridid;
  PPlist *rotgrids, *rotmaps;
  PProtmap *rotmap;
  PProtgrid *rotgrid;
  CuVar *lonvar, *latvar;  
  PPvar *lonppvar, *latppvar;

  PPlandmask *landmask;

  char *varnamea, *varnameb;

  char dimnamestem[CU_MAX_NAME], units[CU_MAX_NAME];
  char formulaterms[MAX_ATT_LEN+1];

  int dont_free_horiz_axes;

  int added;

  int zindex,tindex,svindex;

  /* ------------------------------------------------------ */  
  /* initialisation constants which matter */
  ncvars = 0;
  have_hybrid_sigmap = 0;
  have_time_mean = 0;
  svindex = 1;

  /* initialisation constants just to avoid compiler warnings
   * (rather than get accustomed to ignoring warnings)
   * but flow logic should mean that these vars do actually get
   * initialised elsewhere before use
   */
  at_end_rec=0;
  xaxis=yaxis=NULL;
  fvar=NULL;
  zaxis=NULL;
  taxis=NULL;
  axislist=NULL;
  tmdimid=-1;
  dont_free_horiz_axes=0;
  /* ------------------------------------------------------ */

  ppfile = file->internp;

  heaplist=ppfile->heaplist;

  nrec = ppfile->nrec;  
  recs = ppfile->recs;

  /* initialise elements in the records before sorting */
  CKI(   pp_initialise_records(recs, nrec, heaplist)   );

  /* sort the records */
  qsort(recs, nrec, sizeof(PPrec*), pp_compare_records);  

  /* now sort out the list of variables and dimensions */

  CKP(   fieldvars=pp_list_new(heaplist)   );
  CKP(   xaxes=pp_list_new(heaplist)   );
  CKP(   yaxes=pp_list_new(heaplist)   );
  CKP(   zaxes=pp_list_new(heaplist)   );
  CKP(   taxes=pp_list_new(heaplist)   );
  CKP(   rotmaps=pp_list_new(heaplist)  );
  CKP(   rotgrids=pp_list_new(heaplist)  );

  /* before main loop over records, look for land mask */
  for (rec=0; rec<nrec ; rec++) {

    recp = recs[rec];
    hdrp = &recp->hdr;    

    if (pp_var_is_land_mask(hdrp)) {
      
      CKP(   landmask = pp_malloc(sizeof(PPlandmask),heaplist)   );

      CKI(  pp_set_horizontal_axes(recp,ppfile,&xaxis,&yaxis,rotmaps,heaplist)  );

      CKP(   landmask->data = pp_data_new(inttype,pp_genaxis_len(xaxis) * pp_genaxis_len(yaxis),heaplist)   ); /* JAK 2005-01-05 */

      /* read in land mask data values */

      landmask->xaxis = xaxis;
      landmask->yaxis = yaxis;
      CKP(   landmask->data->values=pp_read_data_record(recp,ppfile,heaplist)   );

      ppfile->landmask = landmask;

    }	
  }

  /* ====== START LOOP OVER RECORDS ====== */

  for (rec=0; rec<nrec ; rec++) {

    recp = recs[rec];
    hdrp = &recp->hdr;

    /* we are at start record of a variable at the very start, or if at we were at the
     * end record last time
     */
    at_start_rec = ( rec == 0 || at_end_rec );

    /* we are at end record of a variable at the very end, or if the header shows a 
     * difference from the next record which constitutes a different variable
     */
    at_end_rec = ( rec == nrec-1 ||
		   pp_records_from_different_vars(recs[rec+1],recp));
    
    /*------------------------------*/
    /* allow for variables which are unsupported for some reason */

    if (at_start_rec)
      if (pp_test_skip_var(hdrp, ppfile->landmask))
	continue;
      
    /* -------

    if (at_start_rec) 
      puts("++++++ START OF VARIABLE +++++++++");
    printf("processing record %d / %d\n",rec,nrec);
    pp_dump_header(hdrp);

    ------ */


    if (at_start_rec) {
      /* ====== THINGS DONE ONLY AT START RECORD OF EACH VARIABLE ====== */

      /* get PPvar structure, and initialise certain structure members for tidiness */
      CKP(   fvar=pp_malloc(sizeof(PPfieldvar), heaplist)   );
      CKP(   fvar->axes=pp_list_new(heaplist)  );  /* JAK 2005-01-05 */
      fvar->firstrecno = rec;
      fvar->firstrec = recp;

      if (pp_get_var_compression(hdrp) == 2) {
	/* land/sea mask compression: for horiz axes use those of LSM */
	xaxis = ppfile->landmask->xaxis;
	yaxis = ppfile->landmask->yaxis;
	dont_free_horiz_axes = 1;
      } else {

	CKI(  pp_set_horizontal_axes(recp,ppfile,&xaxis,&yaxis,rotmaps,heaplist)  );

	dont_free_horiz_axes = 0;
      }

      CKP(   zaxis=pp_genaxis_new(zaxis_type,zdir,heaplist)   );
      CKI(  pp_zaxis_set(zaxis,hdrp)  );

      CKP(   taxis=pp_genaxis_new(taxis_type,tdir,heaplist)   );
      CKI(  pp_taxis_set(taxis,hdrp)  );

    }

    /* construct pp_lev struct, and add it to the z axis if not already present
     * (could already be present if field has multiple times on each level)
     */

    /* ====== THINGS DONE FOR EVERY PP RECORD ====== */

    CKI(  pp_zaxis_add(zaxis, recp->lev, &zindex, heaplist)  );
    recp->zindex = zindex;

    CKI(  pp_taxis_add(taxis, recp->time, &tindex, heaplist)  );
    recp->tindex = tindex;

    /* ===================================================== */
    if (at_end_rec) {
     /* ====== THINGS DONE ONLY AT END RECORD OF EACH VARIABLE ====== */

      fvar->lastrecno = rec;
      nvrec = fvar->lastrecno - fvar->firstrecno + 1;
      vrecs = recs + fvar->firstrecno;

      /* now if the axes are not regular, free the axes, split the variable into a number of variables and try again... */
      if (pp_set_disambig_index(zaxis, taxis, vrecs, nvrec, svindex)) {
	
	/* increment the supervar index, used later to show the connection between
	 *  the separate variables into which this one will be split
	 */
	svindex++;

	/* now re-sort this part of the record list, now that we have set the disambig index */
	qsort(vrecs, nvrec, sizeof(PPrec*), pp_compare_records);  

	/* now go back to the start record of the variable; set to one less because it
	 * will get incremented in the "for" loop reinitialisation
	 */
	rec = fvar->firstrecno - 1;

	/* and free the stuff assoc with the var we won't be using */
	if (!dont_free_horiz_axes) {
	  CKI(  pp_genaxis_free(xaxis,heaplist)  );
	  CKI(  pp_genaxis_free(yaxis,heaplist)  );
	}
	CKI(  pp_genaxis_free(zaxis,heaplist)  );
	CKI(  pp_genaxis_free(taxis,heaplist)  );
	CKI(  pp_free(fvar,heaplist)  );

	continue;
      }

      /*------------------------------------------------------------*/

      /*
       * For each axis, see if it matches an axis which already exists from a previous
       * variable.
       *
       * If so, then free the structure and point to the existing occurrence instead.
       *
       * If not, then add to the list.
       */

      /* x */
      CKI(  added = pp_list_add_or_find(xaxes, &xaxis, pp_genaxis_compare, 0, 
					(dont_free_horiz_axes ? NULL : (free_func) pp_genaxis_free),
					NULL, heaplist)  );
      if (added)
	ncvars++;

      /* y */
      CKI(  added = pp_list_add_or_find(yaxes, &yaxis, pp_genaxis_compare, 0, 
					(dont_free_horiz_axes ? NULL : (free_func) pp_genaxis_free),
					NULL, heaplist)  );
      if (added)
	ncvars++;

      /* z */
      CKI(  added = pp_list_add_or_find(zaxes, &zaxis, pp_genaxis_compare, 0, 
					(free_func) pp_genaxis_free,
					NULL, heaplist)  );
      if (added) {
	ncvars++;
	if (pp_zaxis_lev_type(zaxis) == hybrid_sigmap_lev_type) {
	  /* two more coord vars (a and b coeffs) */
	  ncvars+=2;
	  have_hybrid_sigmap=1;
	}
	if (pp_zaxis_lev_type(zaxis) == hybrid_height_lev_type) {
	  /* two more coord vars (a and b coeffs) */
	  ncvars+=2;
	}
      }

      /* t */
      CKI(  added = pp_list_add_or_find(taxes, &taxis, pp_genaxis_compare, 0, 
					(free_func) pp_genaxis_free,
					NULL, heaplist)  );
      if (added) {
	ncvars++;
	if (pp_taxis_is_time_mean(taxis)) {
	  /* need to make sure we have the mean dim (size 2),
	   * also one more coordinate var
	   */	  
	  have_time_mean=1;
	  ncvars++;
	}
      }

      /* associate var with these axes */
      CKI(   pp_list_add(fvar->axes,xaxis,heaplist)   );
      CKI(   pp_list_add(fvar->axes,yaxis,heaplist)   );
      CKI(   pp_list_add(fvar->axes,zaxis,heaplist)   );
      CKI(   pp_list_add(fvar->axes,taxis,heaplist)   );
      
      /* get the rotated grid, if any 
       * (NB this is done *after* the pp_list_add_or_find stuff above, because 
       * otherwise the axis pointers could get orphaned if the axes are found to 
       * be duplicates)
       */
      CKP(  fvar->rotgrid = pp_get_rotgrid(xaxis,yaxis,rotgrids,heaplist)  );

      /* add the variable */
      CKI(   pp_list_add(fieldvars, fvar, heaplist)   );
      
      /* ===================================================== */
    }
  }

    
  /*  ====================================================================
   *  Having completed the loop over records, we now know the number of
   *  dimensions and variables, so we can finally do the relevant calls
   *  to allocate these arrays and populate them usefully.
   *  ====================================================================
   */
  /* FIRST ALLOCATE THE ARRAYS, and initialise some values */
  nfvars = pp_list_size(fieldvars);

  if (nfvars <= 0) {
    CuError(CU_EOPEN,"No valid fields in file\n");
    ERR; /* not the most elegant dealing with this error - ideally would free this file */
  }
  ndims = pp_list_size(xaxes) + pp_list_size(yaxes) + pp_list_size(zaxes) + pp_list_size(taxes);

  if (have_time_mean){    
    tmdimid=ndims;
    ndims++;
  }
  if (have_hybrid_sigmap) {
    /* will need a scalar variable called "p0" */
   ncvars++;
 }

  CKP(   cudims = CuCreateDims(file,ndims)   );

  /* need a grid_mapping variable for every rotation mapping,
   * and need lon and lat variables for every rotated grid
   */
  ncvars += pp_list_size(rotmaps) + 2*pp_list_size(rotgrids);

  nvars = ncvars + nfvars;

  CKP(   cuvars = CuCreateVars(file,nvars)   );

  for (dimid=0; dimid<ndims; dimid++) {
    dim=&cudims[dimid];
    dim->var = (CuVar*)0;
    dim->coord = (CuVar*)0;
    dim->datatype = realtype;
    dim->dimtype = CuGlobalDim;

    /* uncomment if internal structure is to be used
     *   CKP(   dim->internp = pp_malloc(sizeof(PPdim), heaplist)   );
     *   ppdim=(PPdim*)dim->internp;
     */
  }
  for (varid=0; varid<nvars; varid++) {
    var=&cuvars[varid];
    var->datatype = realtype;
    CKP(   var->internp = pp_malloc(sizeof(PPvar), heaplist)   );
    ppvar=(PPvar*)var->internp;
    ppvar->firstrecno=-1;
    ppvar->lastrecno=-1;
    ppvar->data=NULL;
    CKP(   ppvar->atts = pp_list_new(heaplist)   );
  }


  /* 
   * NOW POPULATE THE STRUCTURES
   *
   * The procedure will be to loop over all the axes, adding dimensions and
   * variables associated with those axes.
   *
   * Having done that, any dimensions not associated with axes will be added,
   * and then the field variables will be added.
   */

  dimid=0;
  varid=0;

  for (axistype=0; axistype<num_axistype; axistype++) {
    switch(axistype){
    case xaxistype: axislist=xaxes; break;
    case yaxistype: axislist=yaxes; break;
    case zaxistype: axislist=zaxes; break;
    case taxistype: axislist=taxes; break;
    default: pp_switch_bug("cdunifpp_process");
    }
    pp_list_startwalk(axislist,&handle);
    idim=0;

    while ((axis=pp_list_walk(&handle,0))!=NULL) {
      dim=&cudims[dimid];
      var=&cuvars[varid];
      ppdim=(PPdim*) dim->internp;
      ppvar=(PPvar*) var->internp;
      
      dim->coord = var;

      axis->dimid=dimid;
      dim->len=pp_genaxis_len(axis);
      CKP(  ppvar->data=pp_genaxis_getCF(axis,dimnamestem,units,ppvar->atts,heaplist)  );
      sprintf(dim->name,dimnamestem,idim);
      if (units != NULL) {
	strncpy(dim->units,units,CU_MAX_NAME);
	dim->units[CU_MAX_NAME]='\0';
      }
      strncpy(var->name,dim->name,CU_MAX_NAME);
      var->name[CU_MAX_NAME]='\0';
      var->ndims=1;
      var->dims[0] = dimid;
      varid++;
      /* now add certain variables for hybrid_sigmap z axis */
      if (axistype == zaxistype && pp_zaxis_lev_type(axis) == hybrid_sigmap_lev_type) {
      
	catts=ppvar->atts; /* attribute list for the main coord var */

	/* Hybrid sigma-p A coefficient */
	var=&cuvars[varid];
	ppvar=(PPvar*) var->internp;
	sprintf(var->name,"z%d_hybrid_sigmap_acoeff",idim);
	varnamea=var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis,hybrid_sigmap_a_type,heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts,"units","Pa",heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts,"long_name",
				 "atmospheric hybrid sigma-pressure 'A' coefficient",heaplist)   );
	var->ndims=1;
	var->dims[0] = dimid;
	varid++;

	/* Hybrid sigma-p B coefficient */
	var=&cuvars[varid];
	ppvar=(PPvar*) var->internp;
	sprintf(var->name,"z%d_hybrid_sigmap_bcoeff",idim);
	varnameb=var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis,hybrid_sigmap_b_type,heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts,"long_name",
				 "atmospheric hybrid sigma-pressure 'B' coefficient",heaplist)   );
	var->ndims=1;
	var->dims[0] = dimid;
	varid++;
	
	snprintf(formulaterms,MAX_ATT_LEN,"ap: %s b: %s ps: ps p0: p0",varnamea,varnameb);

	CKI(   pp_add_string_att(catts,"formula_terms",formulaterms,heaplist)   );
	CKI(   pp_add_string_att(catts,"standard_name","atmosphere_hybrid_sigma_pressure_coordinate",heaplist)   );

	CKI(   pp_add_string_att(catts,"comments",
				 "The \"ps\" term in formula_terms is set to \"ps\" variable. "
				 "This variable may or may not be provided.",heaplist)   );
      }

      /* now add certain variables for hybrid_height z axis */
      if (axistype == zaxistype && pp_zaxis_lev_type(axis) == hybrid_height_lev_type) {
      
	catts=ppvar->atts; /* attribute list for the main coord var */

	/* Hybrid height A coefficient */
	var=&cuvars[varid];
	ppvar=(PPvar*) var->internp;
	sprintf(var->name,"z%d_hybrid_height_acoeff",idim);
	varnamea=var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis,hybrid_height_a_type,heaplist)   );
	CKI(   pp_add_string_att(ppvar->atts,"units","m",heaplist)   );
	var->ndims=1;
	var->dims[0] = dimid;
	varid++;

	/* Hybrid height B coefficient */
	var=&cuvars[varid];
	ppvar=(PPvar*) var->internp;
	sprintf(var->name,"z%d_hybrid_height_bcoeff",idim);
	varnameb=var->name;
	CKP(   ppvar->data = pp_genaxis_to_values(axis,hybrid_height_b_type,heaplist)   );
	var->ndims=1;
	var->dims[0] = dimid;
	varid++;
	
	snprintf(formulaterms,MAX_ATT_LEN,"a: %s b: %s orog: orography",varnamea,varnameb);

	CKI(   pp_add_string_att(catts,"formula_terms",formulaterms,heaplist)   );
	CKI(   pp_add_string_att(catts,"standard_name","atmosphere_hybrid_sigma_pressure_coordinate",heaplist)   );

	CKI(   pp_add_string_att(catts,"comments",
				 "The \"orog\" term in formula_terms is set to \"orography\" variable. "
				 "This variable may or may not be provided.",heaplist)   );
      }


      /* add the boundary variable for time mean */
      if (axistype == taxistype && pp_taxis_is_time_mean(axis)) {
	catts=ppvar->atts; /* attribute list for the main coord var */

	var=&cuvars[varid];
	ppvar=(PPvar*) var->internp;
	sprintf(var->name,"time_bnd%d",idim);
	CKP(   ppvar->data = pp_taxis_to_boundary_values(axis->axis,heaplist)   );
	var->ndims=2;
	var->dims[0]=dimid;
	var->dims[1]=tmdimid;
	
	CKI(   pp_add_string_att(catts,"bounds",var->name,heaplist)   );

	varid++;
      }
      dimid++;
      idim++;      
    } /* end loop over axes of given */
  } /* end loop over axis types */

  /* add nv dimension if we had time mean */
  if (have_time_mean) {

    dim=&cudims[dimid];

    strcpy(dim->name,"nv");
    dim->len=2;
    
    /* Should have tmdimid=dimid, but actually we already set it above (it evaluates to ndims)
     * as we needed it before we got here.  So just do a check here.
     */
    if ( tmdimid != dimid ) {
      pp_error_mesg("cdunifpp_process","ID wrong for 'nv' dimension?");
      ERR;
    }

    dimid++;
  }

  /* add p0 variable if we had hybrid_sigmap coords */
  if (have_hybrid_sigmap) {
     
    var=&cuvars[varid];
    ppvar=(PPvar*) var->internp;
    sprintf(var->name,"p0");
    var->ndims=0;
    CKI(   pp_add_string_att(ppvar->atts,"long_name",
			     "reference pressure value for atmospheric hybrid sigma-pressure coordinates",
			     heaplist)   );
    /* single value consisting of p0 */
    CKP(   ppvar->data = pp_data_new(realtype,1,heaplist)   );
    ((Freal*)(ppvar->data->values))[0]=reference_pressure;
    varid++;
  }

  /* add any rotated_pole variables */
  rotmapid=0;
  pp_list_startwalk(rotmaps,&handle);
  while ((rotmap=pp_list_walk(&handle,0))!=NULL) {
    
    var=&cuvars[varid];
    ppvar=(PPvar*) var->internp;
    sprintf(var->name,"rotated_pole%d",rotmapid);

    strncpy(rotmap->name,var->name,CU_MAX_NAME);
    rotmap->name[CU_MAX_NAME]='\0';

    /* single value of arbitrary type; set as integer = 0 */
    var->datatype=inttype;
    var->ndims=0;
    CKP(   ppvar->data = pp_data_new(inttype,1,heaplist)   );
    ((Freal*)(ppvar->data->values))[0]=0;

    /* and add attributes */
    catts=ppvar->atts;
    CKI(  pp_add_string_att(catts,"grid_mapping_name","rotated_latitude_longitude",heaplist)  );
    CKI(  pp_add_att(catts,"grid_north_pole_longitude",realtype,1,&rotmap->pole_lon,heaplist)  );
    CKI(  pp_add_att(catts,"grid_north_pole_latitude",realtype,1,&rotmap->pole_lat,heaplist)  );
    CKI(  pp_add_att(catts,"north_pole_grid_longitude",realtype,1,&rotmap->truepole_gridlon,heaplist)  );

    rotmapid++;
    varid++;
  }

  /* and add any lon, lat variables for rotated grids */
  rotgridid=0;
  pp_list_startwalk(rotgrids,&handle);
  while ((rotgrid=pp_list_walk(&handle,0))!=NULL) {

    lonvar=&cuvars[varid];
    lonppvar=(PPvar*) lonvar->internp;
    varid++;

    latvar=&cuvars[varid];
    latppvar=(PPvar*) latvar->internp;
    varid++;

    xaxis = rotgrid->xaxis;
    yaxis = rotgrid->yaxis;
      
    sprintf(lonvar->name,"true_lon%d",rotgridid);
    sprintf(latvar->name,"true_lat%d",rotgridid);

    sprintf(rotgrid->coords,"%s %s",lonvar->name,latvar->name);

    lonvar->ndims=2;
    latvar->ndims=2;

    lonvar->dims[0]=yaxis->dimid;
    latvar->dims[0]=yaxis->dimid;

    lonvar->dims[1]=xaxis->dimid;
    latvar->dims[1]=xaxis->dimid;

    CKI(   pp_calc_rot_grid(rotgrid,&lonppvar->data,&latppvar->data,heaplist)   );
    CKI(  pp_add_string_att(lonppvar->atts,"long_name","longitude",heaplist)  );
    CKI(  pp_add_string_att(latppvar->atts,"long_name","latitude",heaplist)  );

    CKI(  pp_add_string_att(lonppvar->atts,"standard_name","longitude",heaplist)  );
    CKI(  pp_add_string_att(latppvar->atts,"standard_name","latitude",heaplist)  );

    CKI(  pp_add_string_att(lonppvar->atts,"units","degrees_east",heaplist)  );
    CKI(  pp_add_string_att(latppvar->atts,"units","degrees_north",heaplist)  );

    CKI(  pp_add_att(lonppvar->atts,"modulo",realtype,1,&lon_modulo,heaplist)  );

    rotgridid++;
  }

  /* sanity check - the variable ID for the next variable to be added should 
   * now match the number of coordinate variables
   */
  if ( varid != ncvars ) {
    pp_error_mesg("cdunifpp_process","wrong number of coord vars?");
    ERR;
  }
  

  /* add all the attributes for coord variables
   * (didn't do inside the loop because more complicated
   * for hybrid z coords / t mean)
   */
  for (cvarid=0; cvarid<ncvars; cvarid++) {
    var=&cuvars[cvarid];
    ppvar=(PPvar*) var->internp;
    CKI(   pp_copy_and_free_atts(file,var,ppvar->atts,heaplist)   );
  }

  

  /*========================================================
   * Okay we've done all the variables related to dimensions
   * Add the field variables.
   *========================================================
   */
  pp_list_startwalk(fieldvars,&handle);
  while ((fvar=pp_list_walk(&handle,0))!=NULL) {
    var=&cuvars[varid];
    ppvar=(PPvar*) var->internp;
    atts = ppvar->atts;
    hdrp = &fvar->firstrec->hdr;

    CKI(   pp_var_lookup(hdrp, &fvar->stashmeta)   );

    CKI(   pp_get_var_name(varid, fvar->stashmeta.shortname, cuvars)   );
    
    var->ndims=4; /* rpw axeslist len */

    /*
     *  Axes in fvar->axes list are fastest varying first (lon,lat,lev,time)
     *  But require them in netCDF-like order (time,lev,lat,lon), so
     *  reverse the order while copying into var->dims.
     */
    idim=var->ndims;
    pp_list_startwalk(fvar->axes,&thandle);
    while ((axis=pp_list_walk(&thandle,0)) != NULL) {
      var->dims[--idim] = axis->dimid;
    }

    var->datatype = pp_get_var_type(hdrp);

    ppvar->firstrecno = fvar->firstrecno;
    ppvar->lastrecno = fvar->lastrecno;

    CKI(   pp_var_get_extra_atts(var, fvar, cudims, atts, heaplist)   );
   
    CKI(   pp_copy_and_free_atts(file, var, atts, heaplist)   );

    varid++;
  }

  /* sanity check - the variable ID for the next variable to be added (if there was one,
   * which there isn't), should now match the total number of variables
   */
  if ( varid != nvars ) {
    pp_error_mesg("cdunifpp_process","wrong number of vars?");
    ERR;
  }

  
  /* set numbers in file structure */
  file->ndims=ndims;
  file->nvars=nvars;
  file->recdim=-1;

  /* set global attributes */
  CKP(   gatts = pp_get_global_attributes(file->controlpath, ppfile, heaplist)   );
  CKI(   pp_copy_and_free_atts(file,NULL,gatts,heaplist)   );

  /*========================================================
   * All done and ready for dimget / varget.
   *========================================================
   */

  /* free what memory we can */
  CKI(   pp_free_tmp_vars(xaxes, yaxes, zaxes, taxes, fieldvars, heaplist)   );

  return 0;

  ERRBLKI("pp_process");
}