// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void InitializeData::readFilterParameters(AbstractFilterParametersReader* reader, int index)
{
reader->openFilterGroup(this, index);
setCellAttributeMatrixPath( reader->readDataArrayPath("CellAttributeMatrixPath", getCellAttributeMatrixPath() ) );
setXMin( reader->readValue("XMin", getXMin()) );
setYMin( reader->readValue("YMin", getYMin()) );
setZMin( reader->readValue("ZMin", getZMin()) );
setXMax( reader->readValue("XMax", getXMax()) );
setYMax( reader->readValue("YMax", getYMax()) );
setZMax( reader->readValue("ZMax", getZMax()) );
reader->closeFilterGroup();
}
BinnedMap::BinnedMap( QObject */*parent*/, const QStringList &/*args*/ )
: KstDataObject() {
_typeString = i18n("Plugin");
_type = "Plugin";
setXMin(-1.0);
setYMin(-1.0);
setXMax(1.0);
setYMax(1.0);
setNX(1);
setNY(1);
setAutoBin(false);
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void InitializeData::readFilterParameters(AbstractFilterParametersReader* reader, int index)
{
reader->openFilterGroup(this, index);
setCellAttributeMatrixPaths( reader->readDataArrayPathVector("CellAttributeMatrixPaths", getCellAttributeMatrixPaths() ) );
setXMin( reader->readValue("XMin", getXMin()) );
setYMin( reader->readValue("YMin", getYMin()) );
setZMin( reader->readValue("ZMin", getZMin()) );
setXMax( reader->readValue("XMax", getXMax()) );
setYMax( reader->readValue("YMax", getYMax()) );
setZMax( reader->readValue("ZMax", getZMax()) );
setInitType(reader->readValue("InitType", getInitType()));
setInitValue(reader->readValue("InitValue", getInitValue()));
setInitRange(reader->readPairOfDoubles("InitRange", getInitRange()));
reader->closeFilterGroup();
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void CropImageGeometry::readFilterParameters(AbstractFilterParametersReader* reader, int index)
{
reader->openFilterGroup(this, index);
setNewDataContainerName( reader->readString("NewDataContainerName", getNewDataContainerName() ) );
setCellAttributeMatrixPath( reader->readDataArrayPath("CellAttributeMatrixPath", getCellAttributeMatrixPath() ) );
setCellFeatureAttributeMatrixPath( reader->readDataArrayPath("CellFeatureAttributeMatrixPath", getCellFeatureAttributeMatrixPath() ) );
setFeatureIdsArrayPath(reader->readDataArrayPath("FeatureIdsArrayPath", getFeatureIdsArrayPath() ) );
setXMin( reader->readValue("XMin", getXMin()) );
setYMin( reader->readValue("YMin", getYMin()) );
setZMin( reader->readValue("ZMin", getZMin()) );
setXMax( reader->readValue("XMax", getXMax()) );
setYMax( reader->readValue("YMax", getYMax()) );
setZMax( reader->readValue("ZMax", getZMax()) );
setRenumberFeatures( reader->readValue("RenumberFeatures", getRenumberFeatures()) );
setSaveAsNewDataContainer( reader->readValue("SaveAsNewDataContainer", getSaveAsNewDataContainer()) );
setUpdateOrigin( reader->readValue("UpdateOrigin", getUpdateOrigin()) );
reader->closeFilterGroup();
}
void setupInitialConditions()
{
setParticleDimensions(2);
setSystemDimensions(2);
setXMin(-2.0);
setXMax(2.0);
setYMin(-2.0);
setYMax(2.0);
species->setDensity(6.0 / constants::pi);
setGravity(Vec3D(0.0, 0.0, 0.0));
species->setCollisionTimeAndRestitutionCoefficient(0.01, 1.0, 1.0);
setTimeStep(0.0002);
setTimeMax(1.0);
setSaveCount(helpers::getSaveCountFromNumberOfSavesAndTimeMaxAndTimestep(20, getTimeMax(), getTimeStep()));
p1f = particleHandler.copyAndAddObject(BaseParticle());
p2f = particleHandler.copyAndAddObject(BaseParticle());
p3f = particleHandler.copyAndAddObject(BaseParticle());
p1e = particleHandler.copyAndAddObject(BaseParticle());
p2e = particleHandler.copyAndAddObject(BaseParticle());
p3e = particleHandler.copyAndAddObject(BaseParticle());
triangle = wallHandler.copyAndAddObject(IntersectionOfWalls());
std::vector<Vec3D> points={Vec3D(0.5,-std::sqrt(3)/6.0,0.0),Vec3D(0.0,std::sqrt(3)/3.0,0.0),Vec3D(-0.5,-std::sqrt(3)/6.0,0.0),Vec3D(0.5,-std::sqrt(3)/6.0,0.0)};
triangle->createOpenPrism(points,Vec3D(0.0,0.0,1.0));
p1f->setRadius(0.1);
p2f->setRadius(0.1);
p3f->setRadius(0.1);
p1f->setPosition(Vec3D(-0.5, std::sqrt(3)/6.0,0.0));
p2f->setPosition(Vec3D(-0.0,-std::sqrt(3)/3.0,0.0));
p3f->setPosition(Vec3D( 0.5, std::sqrt(3)/6.0,0.0));
p1f->setVelocity(Vec3D( 0.5,-std::sqrt(3)/6.0,0.0));
p2f->setVelocity(Vec3D( 0.0, std::sqrt(3)/3.0,0.0));
p3f->setVelocity(Vec3D(-0.5,-std::sqrt(3)/6.0,0.0));
p1e->setRadius(0.1);
p2e->setRadius(0.1);
p3e->setRadius(0.1);
p1e->setPosition(1.5*Vec3D( 0.5,-std::sqrt(3)/6.0,0.0));
p2e->setPosition(1.5*Vec3D( 0.0, std::sqrt(3)/3.0,0.0));
p3e->setPosition(1.5*Vec3D(-0.5,-std::sqrt(3)/6.0,0.0));
p1e->setVelocity(Vec3D(-0.5, std::sqrt(3)/6.0,0.0));
p2e->setVelocity(Vec3D( 0.0,-std::sqrt(3)/3.0,0.0));
p3e->setVelocity(Vec3D( 0.5, std::sqrt(3)/6.0,0.0));
}
ComplexPlotter::ComplexPlotter(QWidget *parent) : Plotter(parent), mP(ComplexPlotter::Parameter()),
mRepaintEnabled(false),
finishCounter(0), mStopwatch(new QElapsedTimer), mMutex()
{
mP.mF = new MFC_t;
paintThreads = new ImageRendererThread*[MAX_THREADS]; // there's a maximum of MAX_THREADS threads allowed
for(int i=0; i<MAX_THREADS; ++i)
paintThreads[i] = new ImageRendererThread(i, mMutex);
mLabel = new QLabel(this);
mLabel->setSizePolicy(QSizePolicy::MinimumExpanding, QSizePolicy::MinimumExpanding);
QVBoxLayout *l = new QVBoxLayout(this);
l->setContentsMargins(0,0,0,0);
l->addWidget(mLabel);
setYMin(-2);
setYMax(2);
setXMin(-2);
setXMax(2);
}
void setupInitialConditions()
{
relVelocity_ = 1e-1;
setName("AdhesiveForceUnitTest_ParticleWallInteractionWithPlasticForces");
setSystemDimensions(3);
setParticleDimensions(3);
setGravity(Vec3D(0,0,0));
species->setDensity(2000.0);
species->setStiffness(1e2);
species->setAdhesionStiffness(1e2);
species->setAdhesionForceMax(1e-5*species->getAdhesionStiffness());
Mdouble R = 1e-3;
species->setSlidingStiffness(1.2e1);
species->setSlidingFrictionCoefficient(0.01);
setTimeStep(5e-6 / 2.0);
setXMax( 2*R);
setYMax( R);
setZMax( R);
setXMin(0);
setYMin(-R);
setZMin(-R);
particleHandler.clear();
BaseParticle P;
P.setRadius(R);
P.setPosition(Vec3D(R+species->getInteractionDistance()*1/3,0,0));
P.setVelocity(Vec3D(-relVelocity_/2,0,0));
particleHandler.copyAndAddObject(P);
wallHandler.clear();
InfiniteWall w;
w.set(Vec3D(-1, 0, 0), Vec3D(getXMin(), 0, 0));
wallHandler.copyAndAddObject(w);
setTimeMax(getTimeStep()*250*4);
setFileType(FileType::ONE_FILE);
setSaveCount(1);
}
void BinnedMap::load(const QDomElement &e) {
QDomNode n = e.firstChild();
setAutoBin(false);
while (!n.isNull()) {
QDomElement e = n.toElement();
if (!e.isNull()) {
if (e.tagName() == "tag") {
setTag(KstObjectTag::fromString(e.text()));
} else if (e.tagName() == "ivector") {
_inputVectorLoadQueue.append(qMakePair(e.attribute("name"), e.text()));
} else if (e.tagName() == "omatrix") {
KstWriteLocker blockMatrixUpdates(&KST::matrixList.lock());
KstMatrixPtr m;
m = new KstMatrix(KstObjectTag(e.text(), tag()), this);
_outputMatrices.insert(e.attribute("name"), m);
} else if (e.tagName() == "minX") {
setXMin(e.text().toDouble());
} else if (e.tagName() == "maxX") {
setXMax(e.text().toDouble());
} else if (e.tagName() == "minY") {
setYMin(e.text().toDouble());
} else if (e.tagName() == "maxY") {
setYMax(e.text().toDouble());
} else if (e.tagName() == "nX") {
setNX(e.text().toInt());
} else if (e.tagName() == "nY") {
setNY(e.text().toInt());
} else if (e.tagName() == "autoBin") {
setAutoBin(true);
}
}
n = n.nextSibling();
}
}
void setupInitialConditions()
{
if (particleHandler.getNumberOfObjects() != N)
{
particleHandler.clear();
boundaryHandler.clear();
double VP = constants::pi * 4.0 / 3.0;
L = pow(N * VP * DistInt(1, omega) / nu, 1.0 / 3.0);
setXMin(0);
setYMin(0);
setZMin(0);
setXMax(L);
setYMax(L);
setZMax(L);
PeriodicBoundary b0;
b0.set(Vec3D(1, 0, 0), getXMin(), getXMax());
boundaryHandler.copyAndAddObject(b0);
b0.set(Vec3D(0, 1, 0), getYMin(), getYMax());
boundaryHandler.copyAndAddObject(b0);
b0.set(Vec3D(0, 0, 1), getZMin(), getZMax());
boundaryHandler.copyAndAddObject(b0);
particleHandler.setStorageCapacity(2 * N);
BaseParticle p0;
p0.setVelocity(Vec3D(0.0, 0.0, 0.0));
double V = 0;
//Use at least particles with maximum and minimum size
p0.setRadius(1.0);
Vec3D position;
position.Z = random.getRandomNumber(0, getZMax());
position.Y = random.getRandomNumber(0, getYMax());
position.X = random.getRandomNumber(0, getXMax());
p0.setPosition(position);
particleHandler.copyAndAddObject(p0);
V += VP * pow(p0.getRadius(), 3);
p0.setRadius(omega);
position.Z = random.getRandomNumber(0, getZMax());
position.Y = random.getRandomNumber(0, getYMax());
position.X = random.getRandomNumber(0, getXMax());
p0.setPosition(position);
particleHandler.copyAndAddObject(p0);
V += VP * pow(p0.getRadius(), 3);
//For other particles use a random distribution
for (unsigned int i = 2; i < N; i++)
{
p0.setRadius(RandomRadius());
position.Z = random.getRandomNumber(0, getZMax());
position.Y = random.getRandomNumber(0, getYMax());
position.X = random.getRandomNumber(0, getXMax());
p0.setPosition(position);
particleHandler.copyAndAddObject(p0);
V += VP * pow(p0.getRadius(), 3);
}
}
}
void BinnedMap::binnedmap() {
KstVectorPtr x = *_inputVectors.find(VECTOR_X);
KstVectorPtr y = *_inputVectors.find(VECTOR_Y);
KstVectorPtr z = *_inputVectors.find(VECTOR_Z);
KstMatrixPtr map = *_outputMatrices.find(MAP);
KstMatrixPtr hitsMap = *_outputMatrices.find(HITSMAP);
KstScalarPtr autobin = *_inputScalars.find(AUTOBIN);
if (autobin) {
if (autobin->value() != 0.0) {
_autoBin = true;
} else {
_autoBin = false;
}
}
if (_autoBin) {
double minx, miny, maxx, maxy;
int nx, ny;
autoSize(X(), Y(), &nx, &minx, &maxx, &ny, &miny, &maxy);
setNX(nx);
setNY(ny);
setXMin(minx);
setXMax(maxx);
setYMin(miny);
setYMax(maxy);
} else {
KstScalarPtr xmin = *_inputScalars.find(XMIN);
KstScalarPtr xmax = *_inputScalars.find(XMAX);
KstScalarPtr ymin = *_inputScalars.find(YMIN);
KstScalarPtr ymax = *_inputScalars.find(YMAX);
KstScalarPtr nx = *_inputScalars.find(NX);
KstScalarPtr ny = *_inputScalars.find(NY);
if (xmin) {
_xMin = xmin->value();
}
if (xmax) {
_xMax = xmax->value();
}
if (ymin) {
_yMin = ymin->value();
}
if (ymax) {
_yMax = ymax->value();
}
if (nx) {
_nx = (int)nx->value();
}
if (ny) {
_ny = (int)ny->value();
}
}
bool needsresize = false;
if (_nx < 2) {
_nx = 2;
needsresize = true;
}
if (_ny < 2) {
_ny = 2;
needsresize = true;
}
if ((map->xNumSteps() != _nx) || (map->yNumSteps() != _ny) ||
(map->minX() != _xMin) || (map->minY() != _yMin)) {
needsresize = true;
}
if (map->xStepSize() != (_xMax - _xMin)/double(_nx-1)) {
needsresize = true;
}
if (map->yStepSize() != (_yMax - _yMin)/double(_ny-1)) {
needsresize = true;
}
if (needsresize) {
map->change(map->tag(), _nx, _ny, _xMin, _yMin,
(_xMax - _xMin)/double(_nx-1), (_yMax - _yMin)/double(_ny-1));
map->resize(_nx, _ny);
hitsMap->change(hitsMap->tag(), _nx, _ny, _xMin, _yMin,
(_xMax - _xMin)/double(_nx-1), (_yMax - _yMin)/double(_ny-1));
hitsMap->resize(_nx, _ny);
}
map->zero();
hitsMap->zero();
int ns = z->length(); // the z vector defines the number of points.
double n,p, x0, y0, z0;
for (int i=0; i<ns; i++) {
x0 = x->interpolate(i, ns);
y0 = y->interpolate(i, ns);
z0 = z->interpolate(i, ns);
p = map->value(x0, y0)+z0;
map->setValue(x0, y0, p);
n = hitsMap->value(x0, y0)+1;
hitsMap->setValue(x0, y0, n);
}
for (int i=0; i<_nx; i++) {
for (int j=0; j<_ny; j++) {
p = map->valueRaw(i, j);
n = hitsMap->valueRaw(i, j);
if (n>0) {
map->setValueRaw(i, j, p/n);
} else {
map->setValueRaw(i, j, KST::NOPOINT);
}
}
}
}
void setupInitialConditions()
{
auto species = speciesHandler.copyAndAddObject(LinearViscoelasticFrictionSpecies());
species->setDensity(constants::pi / 6.0);
double stiffness = 1e5;
setParticleDimensions(2);
species->setDensity(2500);
species->setStiffness(stiffness);
species->setSlidingStiffness(2.0 / 7.0 * stiffness);
species->setSlidingFrictionCoefficient(0.5);
species->setRollingStiffness(2.0 / 5.0 * stiffness);
species->setRollingFrictionCoefficient(0.5);
species->setTorsionStiffness(2.0 / 5.0 * stiffness);
species->setTorsionFrictionCoefficient(0.5);
setGravity(Vec3D(0.0, 0.0, 0.0));
setTimeMax(8e-2);
setTimeStep(2.0e-4);
setFileType(FileType::NO_FILE);
setXMin(0.0);
setYMin(0.0);
setXMax(1.0);
setYMax(1.0);
PeriodicBoundary b0;
b0.set(Vec3D(1, 0, 0), getXMin(), getXMax());
boundaryHandler.copyAndAddObject(b0);
b0.set(Vec3D(0, 1, 0), getYMin(), getYMax());
boundaryHandler.copyAndAddObject(b0);
BaseParticle P0, P1, P2, P3, P4, P5, P6, P7;
//Particle to be removed
P0.setPosition(Vec3D(0.1, 0.1, 0.0));
P1.setPosition(Vec3D(0.3, 0.3, 0.0));
//Contacts starts normal becomes periodic
P2.setPosition(Vec3D(0.6, 0.041, 0.0));
P2.setAngularVelocity(Vec3D(0.3, 0.6, 0.9));
P3.setPosition(Vec3D(0.4, 0.001, 0.0));
//Normal case
P4.setPosition(Vec3D(0.6, 0.82, 0.0));
P4.setAngularVelocity(Vec3D(0.3, 0.6, 0.9));
P5.setPosition(Vec3D(0.4, 0.78, 0.0));
//Contact starts periodic becomes normal and periodic again
P6.setPosition(Vec3D(0.02, 0.42, 0.0));
P6.setAngularVelocity(Vec3D(0.3, 0.6, 0.9));
P7.setPosition(Vec3D(0.82, 0.38, 0.0));
P0.setVelocity(Vec3D(0.0, 0.0, 0.0));
P1.setVelocity(Vec3D(0.0, 0.0, 0.0));
P2.setVelocity(Vec3D(-1.0, 0.0, 0.0));
P3.setVelocity(Vec3D(1.0, 0.0, 0.0));
P4.setVelocity(Vec3D(-1.0, 0.0, 0.0));
P5.setVelocity(Vec3D(1.0, 0.0, 0.0));
P6.setVelocity(Vec3D(-1.0, 0.0, 0.0));
P7.setVelocity(Vec3D(1.0, 0.0, 0.0));
P0.setRadius(0.1);
P1.setRadius(0.1);
P2.setRadius(0.1);
P3.setRadius(0.1);
P4.setRadius(0.1);
P5.setRadius(0.1);
P6.setRadius(0.1);
P7.setRadius(0.1);
particleHandler.copyAndAddObject(P0);
particleHandler.copyAndAddObject(P1);
particleHandler.copyAndAddObject(P2);
particleHandler.copyAndAddObject(P3);
particleHandler.copyAndAddObject(P4);
particleHandler.copyAndAddObject(P5);
particleHandler.copyAndAddObject(P6);
particleHandler.copyAndAddObject(P7);
}