Exemple #1
0
void scanFile(FILE *fp, Args *args){
  char *tag;
  int numRead, *lengths;
  Profile *profiles;
  int n;

  tag = (char *)emalloc(3*sizeof(char));
  numRead = fread(tag,sizeof(char),3,fp);
  assert(numRead == 3);
  while(!feof(fp)){
    if(strcmp(tag,"sum")==0){
      numRead = fread(&n,sizeof(int),1,fp);
      assert(numRead == 1);
      profiles = (Profile *)emalloc(n*sizeof(Profile));
      numRead = fread(profiles,sizeof(Profile),n,fp);
      assert(numRead == n);
      writeProfiles(profiles, n);
      free(profiles);
    }else if(strcmp(tag,"con")==0){
      numRead = fread(&n,sizeof(int),1,fp);
      assert(numRead == 1);
      lengths = (int *)emalloc(n*sizeof(int));
      numRead = fread(lengths,sizeof(int),n,fp);
      assert(numRead == n);
      writeLengths(lengths, n);
      free(lengths);
    }else if(strcmp(tag,"pos")==0){
      writePositions(fp);
    }else if(strcmp(tag,"lik")==0){
      writeLikelihoods(fp);
    }else
      assert(0);
    numRead = fread(tag,sizeof(char),3,fp);
  }
  free(tag);
}
 void CompilationConfigWriter::writeConfig() {
     EL::MapType map;
     map["version"] = EL::Value(1.0);
     map["profiles"] = writeProfiles(m_config);
     m_stream << EL::Value(map) << "\n";
 }