void
ASTBase::loadASTPlugins(const SBMLNamespaces * sbmlns)
{
if (sbmlns == NULL)
{
const std::vector<std::string>& names = SBMLExtensionRegistry::getAllRegisteredPackageNames();
unsigned int numPkgs = (unsigned int)names.size();
for (unsigned int i=0; i < numPkgs; i++)
{
const std::string& uri = names[i];
const SBMLExtension* sbmlext = SBMLExtensionRegistry::getInstance().getExtensionInternal(uri);
if (sbmlext && sbmlext->isEnabled())
{
//const std::string &prefix = xmlns->getPrefix(i);
const ASTBasePlugin* astPlugin = sbmlext->getASTBasePlugin();
if (astPlugin != NULL)
{
ASTBasePlugin* myastPlugin = astPlugin->clone();
myastPlugin->setSBMLExtension(sbmlext);
// myastPlugin->setPrefix(xmlns->getPrefix(i));
myastPlugin->connectToParent(this);
mPlugins.push_back(myastPlugin);
}
}
}
}
else
{
const XMLNamespaces *xmlns = sbmlns->getNamespaces();
if (xmlns)
{
int numxmlns= xmlns->getLength();
for (int i=0; i < numxmlns; i++)
{
const std::string &uri = xmlns->getURI(i);
const SBMLExtension* sbmlext = SBMLExtensionRegistry::getInstance().getExtensionInternal(uri);
if (sbmlext && sbmlext->isEnabled())
{
const ASTBasePlugin* astPlugin = sbmlext->getASTBasePlugin();
if (astPlugin != NULL)
{
ASTBasePlugin* myastPlugin = astPlugin->clone();
myastPlugin->setSBMLExtension(sbmlext);
myastPlugin->setPrefix(xmlns->getPrefix(i));
myastPlugin->connectToParent(this);
mPlugins.push_back(myastPlugin);
}
}
}
}
}
}
void
ASTBase::loadASTPlugins(SBMLNamespaces * sbmlns)
{
if (sbmlns == NULL)
{
unsigned int numPkgs = SBMLExtensionRegistry::getNumRegisteredPackages();
for (unsigned int i=0; i < numPkgs; i++)
{
const std::string &uri = SBMLExtensionRegistry::getRegisteredPackageName(i);
const SBMLExtension* sbmlext = SBMLExtensionRegistry::getInstance().getExtensionInternal(uri);
if (sbmlext && sbmlext->isEnabled())
{
//const std::string &prefix = xmlns->getPrefix(i);
ASTBasePlugin* astPlugin = const_cast<ASTBasePlugin*>(sbmlext->getASTBasePlugin());
if (astPlugin != NULL)
{
//// need to give the plugin infomrtaion about itself
//astPlugin->setSBMLExtension(sbmlext);
//astPlugin->connectToParent(this);
mPlugins.push_back(astPlugin->clone());
}
}
}
}
else
{
XMLNamespaces *xmlns = sbmlns->getNamespaces();
if (xmlns)
{
int numxmlns= xmlns->getLength();
for (int i=0; i < numxmlns; i++)
{
const std::string &uri = xmlns->getURI(i);
const SBMLExtension* sbmlext = SBMLExtensionRegistry::getInstance().getExtensionInternal(uri);
if (sbmlext && sbmlext->isEnabled())
{
ASTBasePlugin* astPlugin = const_cast<ASTBasePlugin*>(sbmlext->getASTBasePlugin());
if (astPlugin != NULL)
{
astPlugin->setSBMLExtension(sbmlext);
astPlugin->setPrefix(xmlns->getPrefix(i));
astPlugin->connectToParent(this);
mPlugins.push_back(astPlugin->clone());
}
}
}
}
}
}
ASTBasePlugin* operator() (ASTBasePlugin* ast) {
if (!ast) return 0;
ASTBasePlugin * cl = ast->clone();
cl->connectToParent(NULL);
return cl;
}
