Exemple #1
0
bool CQGlobalQuantityDM::removeGlobalQuantityRows(QModelIndexList rows, const QModelIndex&)
{
  if (rows.isEmpty())
    return false;

  switchToWidget(CCopasiUndoCommand::GLOBALQUANTITYIES);

  //Build the list of pointers to items to be deleted
  //before actually deleting any item.
  QList <CModelValue *> pGlobalQuantities;
  QModelIndexList::const_iterator i;

  for (i = rows.begin(); i != rows.end(); ++i)
    {
      if (!isDefaultRow(*i) && &mpGlobalQuantities->operator [](i->row()))
        pGlobalQuantities.append(&mpGlobalQuantities->operator [](i->row()));
    }

  QList <CModelValue *>::const_iterator j;

  for (j = pGlobalQuantities.begin(); j != pGlobalQuantities.end(); ++j)
    {
      CModelValue * pGQ = *j;

      size_t delRow =
        mpGlobalQuantities->CCopasiVector< CModelValue >::getIndex(pGQ);

      if (delRow == C_INVALID_INDEX)
        continue;

      QMessageBox::StandardButton choice =
        CQMessageBox::confirmDelete(NULL, "quantity",
                                    FROM_UTF8(pGQ->getObjectName()),
                                    pGQ->getDeletedObjects());

      if (choice == QMessageBox::Ok)
        removeRow((int) delRow);
    }

  return true;
}
void CFixLocalReactionParameters::changeModel()
{
  CCopasiParameter * pParameter = NULL;
  CModelValue * pModelValue = NULL;
  CReaction * pReaction = NULL;

  std::stringstream NameStream;
  std::stringstream Message;

  std::string OldCN;
  std::string NewCNBase;
  std::string NewCN;
  std::string Infix;

  std::string::size_type Start;

  // Loop through all changes.
  std::multimap< CCopasiParameter *, const CExpression * >::const_iterator itChanges = mChanges.begin();
  std::multimap< CCopasiParameter *, const CExpression * >::const_iterator endChanges = mChanges.end();

  for (; itChanges != endChanges; ++itChanges)
    {
      if (pParameter != itChanges->first)
        {
          // We have a new parameter
          pParameter = itChanges->first;
          OldCN = "<" + pParameter->getCN() + ",Reference=";

          // Create a global quantity of type FIXED.
          std::string Name = pParameter->getObjectName();
          pReaction = static_cast< CReaction * >(pParameter->getObjectAncestor("Reaction"));
          Name += "{" + pReaction->getObjectName() + "}";

          pModelValue = mpModel->createModelValue(Name, pParameter->getValue< C_FLOAT64 >());

          // In case the created name is not unique we append _n with increasing n
          // until we succeed;
          C_INT32 index = 0;

          while (pModelValue == NULL)
            {
              NameStream.str("");
              NameStream << Name << "_" << index++;
              pModelValue = mpModel->createModelValue(NameStream.str(), pParameter->getValue< C_FLOAT64 >());
            }

          NewCNBase = "<" + pModelValue->getCN() + ",Reference=";

          // If the parameter is actually used in the reaction
          // it is changed to the global quantity.
          if (pReaction->isLocalParameter(pParameter->getObjectName()))
            pReaction->setParameterMapping(pParameter->getObjectName(), pModelValue->getKey());

          Message << "  " << pParameter->getObjectName() << " in " << pReaction->getObjectName()
                  << " is replaced by " << pModelValue->getObjectName() << std::endl;
        }

      // We need to distinguish between initial and other expressions.
      if (itChanges->second->getObjectName().compare(0, 7, "Initial") == 0)
        NewCN = NewCNBase + "Initial";
      else
        NewCN = NewCNBase;

      // Replace the OldCN of the parameter with the NewCN of global quantity in all expressions.
      Infix = itChanges->second->getInfix();

      // There may be more than one occurrence.
      Start = 0;

      while ((Start = Infix.find(OldCN), Start) != std::string::npos)
        Infix.replace(Start, OldCN.length(), NewCN);

      const_cast< CExpression * >(itChanges->second)->setInfix(Infix);
    }

  CCopasiMessage(CCopasiMessage::WARNING, MCXML + 14, Message.str().c_str());
}