Exemple #1
0
int main(int argc, char **argv)
{
    cout << "Test begins." << endl;
    cout << "-------------------------------------------------------" << endl;

    string index_dir = getenv("index_dir");
    string init_data_file = index_dir + "/init_data";
    string update_data_file = index_dir + "/update_data";

    cout << "Read init data from " << init_data_file << endl;
    cout << "Save index to " << index_dir << endl;
    cout << "Read update data from " << update_data_file << endl;

    buildIndex(init_data_file, index_dir);

    IndexMetaData *indexMetaData = new IndexMetaData( new CacheManager(),
    		mergeEveryNSeconds, mergeEveryMWrites,
    		updateHistogramEveryPMerges, updateHistogramEveryQWrites,
    		index_dir);
    Indexer *index = Indexer::load(indexMetaData);
    index->createAndStartMergeThreadLoop();
    cout << "Index loaded." << endl;

    updateIndexAndLookupRecord(update_data_file, index);
    
    delete index;
    delete indexMetaData;

    return 0;
}
/**
 * @brief Adds Jacobian @f$ \frac{\partial F}{\partial \dot{y}} @f$ to bead mobile phase rows of system Jacobian
 * @details Actually adds @f$ \alpha \frac{\partial F}{\partial \dot{y}} @f$, which is useful
 *          for constructing the linear system in BDF time discretization.
 * @param [in,out] jac On entry, RowIterator of the particle block pointing to the beginning of a bead shell;
 *                     on exit, the iterator points to the end of the mobile phase
 * @param [in] idxr Indexer
 * @param [in] alpha Value of \f$ \alpha \f$ (arises from BDF time discretization)
 * @param [in] timeFactor Factor which is premultiplied to the time derivatives originating from time transformation
 */
void GeneralRateModel::addMobilePhaseTimeDerivativeToJacobianParticleBlock(linalg::FactorizableBandMatrix::RowIterator& jac, const Indexer& idxr, double alpha, double timeFactor)
{
	// Compute total factor
	alpha *= timeFactor;

	// Mobile phase
	for (int comp = 0; comp < static_cast<int>(_disc.nComp); ++comp, ++jac)
	{
		// Add derivative with respect to dc_p / dt to Jacobian
		jac[0] += alpha;

		const double invBetaP = (1.0 - static_cast<double>(_parPorosity)) / (static_cast<double>(_poreAccessFactor[comp]) * static_cast<double>(_parPorosity));

		// Add derivative with respect to dq / dt to Jacobian
		for (int i = 0; i < static_cast<int>(_disc.nBound[comp]); ++i)
		{
			// Index explanation:
			//   -comp -> go back to beginning of liquid phase
			//   + strideParLiquid() skip to solid phase
			//   + offsetBoundComp() jump to component (skips all bound states of previous components)
			//   + i go to current bound state
			jac[idxr.strideParLiquid() - comp + idxr.offsetBoundComp(comp) + i] += alpha * invBetaP;
		}
	}
}
BMessage* Copy::Do(PDocument *doc, BMessage *settings)
{
	BMessage 	*clip				= NULL;
	BMessage	*node				= NULL;
	BMessage	*from				= NULL;
	BMessage	*to					= NULL;
	bool		fselect				= false;
	bool		tselect				= false;
	BMessage	*copyMessage		= new BMessage();
	BList		*selected			= doc->GetSelected();
	BList		*allConnections		= doc->GetAllConnections();

	int32		i					= 0;
	Indexer		*indexer			= new Indexer(doc);
	if (doc->Lock())
	{
		for (i=0;i<selected->CountItems();i++)
		{
			if (node=(BMessage *)selected->ItemAt(i))
			{
				if (node->what != P_C_CONNECTION_TYPE)
					copyMessage->AddMessage("node",indexer->IndexNode(node));
			}

		}
		for (i=0;i<allConnections->CountItems();i++ )
		{

			node = (BMessage *)allConnections->ItemAt(i);
			if ( (node->FindPointer("From",(void **)&from) == B_OK) &&
				 (node->FindPointer("To",(void **)&to) == B_OK) )
			{
				if ((from->FindBool("selected",&fselect)==B_OK) && (to->FindBool("selected",&tselect) == B_OK) )
				{
					if (fselect && tselect)
						copyMessage->AddMessage("node",indexer->IndexConnection(node,true));
					else if (fselect || tselect)
						copyMessage->AddMessage("node",indexer->IndexConnection(node));
				}
			}

		}	
		doc->Unlock();
	}
	if (be_clipboard->Lock()) 
	{
		be_clipboard->Clear();
		if (clip = be_clipboard->Data()) 
		{
			clip->AddData("application/x-vnd.projectconceptor-document", B_MIME_TYPE, copyMessage, sizeof(copyMessage));
			clip->AddMessage("test",copyMessage);
			PRINT_OBJECT(*clip);
			be_clipboard->Commit();
		}
		be_clipboard->Unlock();
	} 
	settings = PCommand::Do(doc,settings);
	return settings;
}
status_t PDocument::Archive(BMessage* archive, bool deep) const
{
	TRACE();
	BLooper::Archive(archive, deep);
	Indexer		*indexer				= new Indexer((PDocument *)this);
	int32		i						= 0;
	BMessage	*commandManage			= new BMessage();
	BMessage	*tmpNode				= NULL;
	BMessage	*allNodesMessage		= new BMessage();
	BMessage	*allConnectionsMessage	= new BMessage();
	BMessage	*selectedMessage		= new BMessage();

	archive->AddMessage("PDocument::documentSetting",documentSetting);
	//save all Nodes
	for (i=0; i<allNodes->CountItems();i++)
	{
		tmpNode=(BMessage *)allNodes->ItemAt(i);
		allNodesMessage->AddMessage("node",indexer->IndexNode(tmpNode));
	}
	archive->AddMessage("PDocument::allNodes",allNodesMessage);
	//save all Connections
	for (i=0; i<allConnections->CountItems();i++)
	{
		tmpNode=(BMessage *)allConnections->ItemAt(i);
		allConnectionsMessage->AddMessage("node",indexer->IndexConnection(tmpNode));
	}
	archive->AddMessage("PDocument::allConnections",allConnectionsMessage);
	//save the selected List
	for (i=0; i<selected->CountItems();i++)
	{
		selectedMessage->AddPointer("node",selected->ItemAt(i));
	}
	archive->AddMessage("PDocument::selected",selectedMessage);
	//save all Command related Stuff like Undo/Makor
//	commandManager->Archive(commandManage);
	for (i=0;i<(commandManager->GetUndoList())->CountItems();i++)
	{
		commandManage->AddMessage("undo",indexer->IndexMacroCommand((BMessage *)(commandManager->GetUndoList())->ItemAt(i)));

	}
	for (i=0;i<(commandManager->GetMacroList())->CountItems();i++)
	{
		commandManage->AddMessage("macro",(BMessage *)(commandManager->GetMacroList())->ItemAt(i));

	}
	commandManage->AddInt32("undoStatus",commandManager->GetUndoIndex());
	archive->AddMessage("PDocument::commandManager", commandManage);

	delete	indexer;
	delete	commandManage;
	//delete	tmpNode;
	delete	allNodesMessage;
	delete	allConnectionsMessage;
	delete	selectedMessage;

	return B_OK;
}
BMessage* Paste::Do(PDocument *doc, BMessage *settings)
{
	BMessage 	*clip				= NULL;
	BMessage	*node				= new BMessage();
	BMessage	*deIndexedNode		= NULL;
	BMessage	*connect			= NULL;
	bool		connectselect		= false;
	BMessage	*copyMessage		= new BMessage;
	int32		messagelen			= 0;
	int32		i					= 0;
	Indexer		*indexer			= new Indexer(doc);
	if (be_clipboard->Lock())
	{
		if (clip = be_clipboard->Data())
		{
//			clip->FindData("application/x-vnd.projectconceptor-document", B_MIME_TYPE, (const void **)&copyMessage, &messagelen);
			clip->FindMessage("test",copyMessage);
			copyMessage->PrintToStream();
		}
		be_clipboard->Unlock();
	}

	if (copyMessage)
	{
		BMessage	*inserter	= new BMessage(P_C_EXECUTE_COMMAND);
		BMessage	*select		= new BMessage(P_C_EXECUTE_COMMAND);
		inserter->AddString("Command::Name","Insert");
		select->AddString("Command::Name","Select");
		while (copyMessage->FindMessage("node",i,node) == B_OK)
		{
			if (node->what == P_C_CONNECTION_TYPE)
				deIndexedNode		= indexer->DeIndexConnection(node);
			else
			{
				deIndexedNode		= indexer->RegisterDeIndexNode(node);
				//only select nodes.. because es the copy and paste funktion with selected nodes dosent work proper
				select->AddPointer("node",deIndexedNode);
			}
			inserter->AddPointer("node",deIndexedNode);

			i++;
			node = new BMessage();
		}
		i=0;
		while (inserter->FindPointer("node",i,(void **)&node) == B_OK)
		{
			if (node->what != P_C_CONNECTION_TYPE)
				indexer->DeIndexNode(node);
			i++;
		}
		inserter->AddMessage("PCommand::subPCommand",select);
		PRINT_OBJECT(*inserter);
		(new BMessenger(NULL,doc))->SendMessage(inserter);
	}
	return settings;
}
void test3()
{
    addRecords();
    
    /// Test the Trie

    SynonymContainer *syn = SynonymContainer::getInstance("", SYNONYM_DONOT_KEEP_ORIGIN);
    syn->init();

    Analyzer *analyzer = new Analyzer(NULL, NULL, NULL, syn, "");

    unsigned mergeEveryNSeconds = 3;
    unsigned mergeEveryMWrites = 5;
    unsigned updateHistogramEveryPMerges = 1;
    unsigned updateHistogramEveryQWrites = 5;
    string INDEX_DIR = ".";
    IndexMetaData *indexMetaData = new IndexMetaData( GlobalCache::create(1000,1000),
    		mergeEveryNSeconds, mergeEveryMWrites,
    		updateHistogramEveryPMerges, updateHistogramEveryQWrites,
    		INDEX_DIR);
    
    Indexer *indexer = Indexer::load(indexMetaData);

    //index->print_Index();

    Record *record = new Record(indexer->getSchema());
    record->setPrimaryKey(1999);
    record->setSearchableAttributeValue(0, "steve jobs");
    record->setSearchableAttributeValue(1, "stanford speech");
    record->setRecordBoost(90);
    indexer->addRecord(record, analyzer);
    indexer->merge_ForTesting();

/*    // create an index searcher
    IndexSearcher *indexSearcher = IndexSearcher::create(indexer);
    Analyzer *analyzer = indexer->getAnalyzer();

    indexer->print_Index();

    ASSERT ( ping(analyzer, indexSearcher, "tom" , 1 , 1001) == true);
    ASSERT ( ping(analyzer, indexSearcher, "jimi" , 1 , 1008) == true);
    ASSERT ( ping(analyzer, indexSearcher, "smith" , 1 , 1001) == true);
    ASSERT ( ping(analyzer, indexSearcher, "jobs" , 1 , 1999) == true);

    (void)analyzer;
    delete indexSearcher;*/

    delete indexer;
    delete analyzer;
}
void PCommandManager::PlayMacro(BMessage *makro)
{
	int32 		i				= 0;
	BMessage	*message		= new BMessage();
	Indexer		*playDeIndexer	= new Indexer(doc);
	status_t	err				= B_OK;
	while ( (makro->FindMessage("Macro::Commmand", i,message) == B_OK) && (err==B_OK) )
	{
		err = Execute(playDeIndexer->DeIndexCommand(message));
		snooze(100000);
		i++;
	}

}
Exemple #8
0
int main()
{
	Parser *parser = new Parser("base/");
	parser->Process();
	vector<Document *>* collection = parser->GetCollection();
	
	Indexer *indexer = new Indexer(collection);
	indexer->Initialize();
	indexer->Process();
	indexer->Print();
	indexer->WriteIndexFile();

	delete indexer;
	delete parser;
}
Indexer* Indexer::createIndex(QString path, int ordinal)
{
	Indexer* indexer;
	QList<QStringList> indices = listIndices(path);
	QStringList info = indices[ordinal];
	
	ImageFeatures* alg = ImageFeatures::factory(info[3]);
	alg->setParams(info[4]);
	indexer = factory(info[1], alg, path);
	indexer->setParams(info[2]);
	
	indexer->loadIndex(info[0]);
	
	return indexer;
}
Exemple #10
0
void I2C::init400k(void){ //todo:3 parameters for fast and a kiloHertz
  init();
  clearHW();
#if I2C_TRACE
  stageTrace.rewind();
#endif
  //cr1 as apb.init sets it up is fine
  int apbRate = getClockRate();
  dcb->cr2 = apbRate / 1000000; //keeps all interrupt enable stuff disabled
  //compute the two fast options, choose the highest
  int r1 = rate(apbRate, (25 * 400000)); //@36 = 4, 4*25 = 100 clocks = 360kHz
  int r0 = rate(apbRate, (3 * 400000)); //@36 = 30, 30*3 = 90 clocks = 400kHz
  if(25 * r1 > 3 * r0) {
    dcb->ccr = (3 << 14) /* fast 9:16*/ | r1;
  } else {
    dcb->ccr = (2 << 14) /* 400kHz 1:2*/ | r0;
  }
  //maximum clock risetime: 3/1000000 = 3e-9 in integers without overflowing
  dcb->riseTime = 1 + quanta(apbRate * 3, 10000000); //300ns: ~11 clocks at 36MHz apb clock.
  //alh: suspect the +1 given in the documents is due to them truncating rather than rounding up.

  //enable interrupts at NVIC:
  eventIrq.prepare(); //NB: simple enable() often generates an interrupt even when all interrupts are masked, dammit! (Busy was true)
  errorIrq.enable();
} /* init */
void AccessTreeViewListener::OnDropIndex(DesktopDragObject* drag_object, index_gid_t source, index_gid_t dest)
{
	AccessModel* model = static_cast<AccessModel*>(m_treeview.GetTreeModel());
	Indexer* indexer = g_m2_engine->GetIndexer();

	if (dest == 0)
		dest = model->GetCategoryID();
	else if (drag_object->GetInsertType() == DesktopDragObject::INSERT_BEFORE || drag_object->GetInsertType() == DesktopDragObject::INSERT_AFTER)
		dest = indexer->GetIndexById(dest)->GetParentId();

	if (!CanDropIndex(source, dest))
		return;

	// corner case, changing the order of two folders
	OpINT32Vector children;
	indexer->GetChildren(source, children, FALSE);
	if (children.Find(dest) != -1)
	{
		Index* index = indexer->GetIndexById(dest);
			
		while (index->GetParentId() != source)
		{
			index = indexer->GetIndexById(index->GetParentId());
		}

		index->SetParentId(indexer->GetIndexById(source)->GetParentId());
	}

	indexer->GetIndexById(source)->SetParentId(dest);
}
void PDocument::PushToStream(BPositionIO *pushTo)
{
	Indexer		*indexer			= new Indexer((PDocument *)this);
	BMessage	*tmpNode			= NULL;
	BMessage	*commandManage		= new BMessage();
	BMessage	*selectedMessage	= new BMessage();
	int			i					= 0;
	//**security check if the passed BPositionIO ok is
	documentSetting->Flatten(pushTo);
	for (i=0; i<allNodes->CountItems();i++)
	{
		tmpNode=(BMessage *)allNodes->ItemAt(i);
		BMessage *indexed = indexer->IndexNode(tmpNode);
		indexed->Flatten(pushTo);
	}
	for (i=0; i<allConnections->CountItems();i++)
	{
		tmpNode=(BMessage *)allConnections->ItemAt(i);
		BMessage *indexed = indexer->IndexConnection(tmpNode);
		indexed->Flatten(pushTo);
	}
	for (i=0; i<selected->CountItems();i++)
	{
		selectedMessage->AddPointer("node",selected->ItemAt(i));
	}
	selectedMessage->Flatten(pushTo);
	for (i=0;i<(commandManager->GetMacroList())->CountItems();i++)
	{
			BMessage *macro =(BMessage *)(commandManager->GetMacroList()->ItemAt(i));
			macro->Flatten(pushTo);
	}
	for (i=0;i<(commandManager->GetUndoList())->CountItems();i++)
	{
		BMessage *indexed = indexer->IndexMacroCommand((BMessage *)(commandManager->GetUndoList()->ItemAt(i)));
		indexed->Flatten(pushTo);
	}
	//**add the UndoIndex
	commandManage->AddInt32("undoStatus",commandManager->GetUndoIndex());
	//add the commandManage
	commandManage->Flatten(pushTo);
	delete	indexer;
	delete	commandManage;
	delete	selectedMessage;
}
Exemple #13
0
template <typename T> void
GenericFactor<T>::absorveEvidence (const T& arg, unsigned obsIdx)
{
  size_t idx = indexOf (arg);
  assert (idx != args_.size());
  assert (obsIdx < ranges_[idx]);
  Params newps;
  newps.reserve (params_.size() / ranges_[idx]);
  Indexer indexer (ranges_);
  for (unsigned i = 0; i < obsIdx; ++i) {
    indexer.incrementDimension (idx);
  }
  while (indexer.valid()) {
    newps.push_back (params_[indexer]);
    indexer.incrementExceptDimension (idx);
  }
  params_ = newps;
  args_.erase (args_.begin() + idx);
  ranges_.erase (ranges_.begin() + idx);
}
Exemple #14
0
TEST(IndexerTest, testGetUserPostIdsMultipleUsers) {
    Indexer i;
    const string username1 = "val";
    const string username2 = "kim";
    const uint64_t postId1 = 666;
    const uint64_t postId2 = 777;
    {
        const TTopics topics = {"find", "secret", "on", "valbok.com"};
        EXPECT_TRUE(i.index(topics, username1, postId1));

        auto item = i.getTopicItem("secret");
        auto postIds = item.userPostIds;
        EXPECT_EQ(1, postIds.size());
        auto it = postIds.begin();
        EXPECT_EQ(username1, it->first);
        EXPECT_EQ(1, it->second.size());
        auto sit = it->second.begin();
        EXPECT_EQ(postId1, *sit);
    }
    {
        const TTopics topics = {"open", "secret", "page"};
        EXPECT_TRUE(i.index(topics, username2, postId2));

        auto item = i.getTopicItem("secret");
        auto postIds = item.userPostIds;
        EXPECT_EQ(2, postIds.size());
        auto it = postIds.begin();
        EXPECT_EQ(username2, it->first);
        EXPECT_EQ(1, it->second.size());
        auto sit = it->second.begin();
        EXPECT_EQ(postId2, *sit);
        ++it;
        EXPECT_EQ(username1, it->first);
        EXPECT_EQ(1, it->second.size());
        sit = it->second.begin();
        EXPECT_EQ(postId1, *sit);
    }
}
Exemple #15
0
void testLELASplicerVsIndexer(const char *file_name)
{
	typedef uint16 modulus_type;
	typedef Modular<modulus_type> Ring;

	modulus_type modulus = MatrixUtil::loadF4Modulus(file_name);
	Ring R (modulus);
	Context<Ring> ctx (R);
	Indexer<uint32> indexer;

	std::ostream &report = commentator.report (Commentator::LEVEL_NORMAL, INTERNAL_DESCRIPTION);

	commentator.start("Loading matrix");
		SparseMatrix<Ring::Element> A = MatrixUtil::loadF4Matrix(R, file_name);
        MatrixUtil::invertMatrixRows(A);	//accomodate format to LELA's splicer
	commentator.stop(MSG_DONE);
        
        commentator.start("Constructing submatrices using Splicer", "USING LELA SPLICER");
                LELA_GF_UTIL::spliceMatrix(R, A);
        commentator.stop(MSG_DONE, "USING LELA SPLICER");
        
        report << endl;
        commentator.start("Constructing submatrices using Indexer", "USING INDEXER");
                commentator.start("Constructing indexes");
                        indexer.processMatrix(A);
                commentator.stop(MSG_DONE);

                SparseMatrix<Ring::Element>    sub_A (indexer.Npiv, indexer.Npiv),
                                                        sub_B (indexer.Npiv, A.coldim () - indexer.Npiv),
                                                        sub_C (A.rowdim () - indexer.Npiv, indexer.Npiv),
                                                        sub_D (A.rowdim () - indexer.Npiv, A.coldim () - indexer.Npiv);

                commentator.start("Constructing sub matrices");
                        indexer.constructSubMatrices(A, sub_A, sub_B, sub_C, sub_D, true);
                commentator.stop(MSG_DONE);
        
        commentator.stop(MSG_DONE, "USING INDEXER");
}
Exemple #16
0
void Serialize(string directoryName)
{
	// Create a schema
	Schema *schema = Schema::create(LocationIndex);
	schema->setPrimaryKey("list_id"); // integer, by default not searchable
	schema->setSearchableAttribute("title", 2); // searchable text
	schema->setSearchableAttribute("address", 7); // searchable text

    // Create an analyzer
    Analyzer *analyzer = new Analyzer(NULL, NULL, NULL, NULL, "");

    unsigned mergeEveryNSeconds = 3;
    unsigned mergeEveryMWrites = 5;
    unsigned updateHistogramEveryPMerges = 1;
    unsigned updateHistogramEveryQWrites = 5;
	CacheManager *cache = new CacheManager(134217728);
    IndexMetaData *indexMetaData = new IndexMetaData(cache,
    		mergeEveryNSeconds, mergeEveryMWrites,
    		updateHistogramEveryPMerges, updateHistogramEveryQWrites,
    		directoryName);

	Indexer *indexer = Indexer::create(indexMetaData, analyzer, schema);

	readRecordsFromFile(indexer, schema, analyzer, directoryName+"/quadtree/1K");

    boost::shared_ptr<QuadTreeRootNodeAndFreeLists> quadtree_ReadView;
    quadtree_ReadView = dynamic_cast<IndexReaderWriter *>(indexer)->getQuadTree_ReadView();
    QuadTreeNode *qt = quadtree_ReadView->root;

	// serialize the index
	indexer->commit();
	indexer->save(directoryName);

	delete indexer;
    delete indexMetaData;
	delete analyzer;
	delete schema;
}
Exemple #17
0
TEST(IndexerTest, testGetUserPostIds) {
    Indexer i;
    const string username = "******";
    const uint64_t postId1 = 666;
    const uint64_t postId2 = 777;
    {
        const TTopics topics = {"please", "give", "me", "job"};
        EXPECT_TRUE(i.index(topics, username, postId1));

        EXPECT_FALSE(i.hasTopicItem("unknown"));
        EXPECT_TRUE(i.hasTopicItem("job"));
        auto item = i.getTopicItem("job");
        EXPECT_EQ(1, item.postsCount);
        auto postIds = item.userPostIds;
        EXPECT_EQ(1, postIds.size());
        auto it = postIds.begin();
        EXPECT_EQ(username, it->first);
        EXPECT_EQ(1, it->second.size());
        auto sit = it->second.begin();
        EXPECT_EQ(postId1, *sit);
    }
    {
        const TTopics topics = {"waiting", "for", "job"};
        EXPECT_TRUE(i.index(topics, username, postId2));

        EXPECT_FALSE(i.hasTopicItem("unknown"));
        EXPECT_TRUE(i.hasTopicItem("job"));
        auto item = i.getTopicItem("job");
        EXPECT_EQ(2, item.postsCount);
        auto postIds = item.userPostIds;
        EXPECT_EQ(1, postIds.size());
        auto it = postIds.begin();
        EXPECT_EQ(username, it->first);
        EXPECT_EQ(2, it->second.size());
        auto sit = it->second.begin();
        EXPECT_EQ(postId2, *sit);
        EXPECT_EQ(postId1, *(++sit));
    }
}
Exemple #18
0
  /* Article indexer methods */
  void *Indexer::indexArticles(void *ptr) {
    pthread_setcanceltype(PTHREAD_CANCEL_DEFERRED, NULL);
    Indexer *self = (Indexer *)ptr;
    unsigned int indexedArticleCount = 0;
    indexerToken token;

    self->indexingPrelude(self->getIndexPath());

    while (self->popFromToIndexQueue(token)) {
      self->index(token.url,
		  token.accentedTitle,
		  token.title,
		  token.keywords,
		  token.content,
		  token.snippet,
		  token.size,
		  token.wordCount
		  );

      indexedArticleCount += 1;

      /* Make a hard-disk flush every 10.000 articles */
      if (indexedArticleCount % 5000 == 0) {
	self->flush();
      }

      /* Test if the thread should be cancelled */
      pthread_testcancel();
    }
    self->indexingPostlude();

    usleep(100);

    self->articleIndexerRunning(false);
    pthread_exit(NULL);
    return NULL;
  }
/**
 * @brief Assembles a particle Jacobian block @f$ J_i @f$ (@f$ i > 0 @f$) of the time-discretized equations
 * @details The system \f[ \left( \frac{\partial F}{\partial y} + \alpha \frac{\partial F}{\partial \dot{y}} \right) x = b \f]
 *          has to be solved. The system Jacobian of the original equations,
 *          \f[ \frac{\partial F}{\partial y}, \f]
 *          is already computed (by AD or manually in residualImpl() with @c wantJac = true). This function is responsible
 *          for adding
 *          \f[ \alpha \frac{\partial F}{\partial \dot{y}} \f]
 *          to the system Jacobian, which yields the Jacobian of the time-discretized equations
 *          \f[ F\left(t, y_0, \sum_{k=0}^N \alpha_k y_k \right) = 0 \f]
 *          when a BDF method is used. The time integrator needs to solve this equation for @f$ y_0 @f$, which requires
 *          the solution of the linear system mentioned above (@f$ \alpha_0 = \alpha @f$ given in @p alpha).
 *
 * @param [in] pblk Index of the particle block
 * @param [in] alpha Value of \f$ \alpha \f$ (arises from BDF time discretization)
 * @param [in] idxr Indexer
 * @param [in] timeFactor Factor which is premultiplied to the time derivatives originating from time transformation
 */
void GeneralRateModel::assembleDiscretizedJacobianParticleBlock(unsigned int pblk, double alpha, const Indexer& idxr, double timeFactor)
{
	linalg::FactorizableBandMatrix& fbm = _jacPdisc[pblk];
	const linalg::BandMatrix& bm = _jacP[pblk];

	// Copy normal matrix over to factorizable matrix
	fbm.copyOver(bm);

	// Add time derivatives to particle shells
	linalg::FactorizableBandMatrix::RowIterator jac = fbm.row(0);
	for (unsigned int j = 0; j < _disc.nPar; ++j)
	{
		// Mobile phase (advances jac accordingly)
		addMobilePhaseTimeDerivativeToJacobianParticleBlock(jac, idxr, alpha, timeFactor);

		// Stationary phase
		_binding->jacobianAddDiscretized(alpha * timeFactor, jac);

		// Advance pointers over all bound states
		jac += idxr.strideParBound();
	}
}
Exemple #20
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TEST(IndexerTest, testGetPostTopic) {
    Indexer i;
    const string username = "******";
    const uint64_t postId = 666;
    {
        const TTopics topics = {"secret", "still", "there"};
        EXPECT_TRUE(i.index(topics, username, postId));
        EXPECT_FALSE(i.hasPostTopics(0));
        EXPECT_TRUE(i.hasPostTopics(postId));
        auto set = i.getPostTopics(postId);
        EXPECT_EQ(3, set.size());
        auto it = set.begin();
        EXPECT_EQ("there", *it);
        EXPECT_EQ("still", *++it);
        EXPECT_EQ("secret", *++it);
    }
    {
        EXPECT_TRUE(i.index({"check_html"}, username, postId));
        auto set = i.getPostTopics(postId);
        EXPECT_EQ(4, set.size());
        auto it = set.begin();
        EXPECT_EQ("check_html", *it);
    }
}
int main(int agrc, char * argv[]){
	
	Indexer indexer;
	indexer.readFiles(argv[1]);
}
Exemple #22
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TEST(IndexerTest, testExtractTopics) {
    Indexer i;
    {
        vector<string> v;
        bool found = i.extractTopics("", v);
        EXPECT_FALSE(found);
        EXPECT_EQ(0, v.size());
    }
    {
        vector<string> v;
        bool found = i.extractTopics("#", v);
        EXPECT_FALSE(found);
        EXPECT_EQ(0, v.size());
    }
    {
        vector<string> v;
        bool found = i.extractTopics("#!", v);
        EXPECT_FALSE(found);
        EXPECT_EQ(0, v.size());
    }
    {
        vector<string> v;
        bool found = i.extractTopics("no #bc!de", v);
        EXPECT_FALSE(found);
        EXPECT_EQ(0, v.size());
    }
    {
        vector<string> v;
        bool found = i.extractTopics("eating steak for dinner", v);
        EXPECT_FALSE(found);
        EXPECT_EQ(0, v.size());
    }
    {
        vector<string> v;
        bool found = i.extractTopics("eating #steak for dinner", v);
        EXPECT_TRUE(found);
        EXPECT_EQ(1, v.size());
        EXPECT_EQ("steak", v[0]);
    }
    {
        vector<string> v;
        bool found = i.extractTopics("#eating #steak for #dinner", v);
        EXPECT_TRUE(found);
        EXPECT_EQ(3, v.size());
        EXPECT_EQ("eating", v[0]);
        EXPECT_EQ("steak", v[1]);
        EXPECT_EQ("dinner", v[2]);
    }

    {
        vector<string> v;
        bool found = i.extractTopics("#eating, #steak. for #dinner. #exactly! #yes?", v);
        EXPECT_TRUE(found);
        EXPECT_EQ(5, v.size());
        EXPECT_EQ("eating", v[0]);
        EXPECT_EQ("steak", v[1]);
        EXPECT_EQ("dinner", v[2]);
        EXPECT_EQ("exactly", v[3]);
        EXPECT_EQ("yes", v[4]);
    }
    {
        vector<string> v;
        bool found = i.extractTopics("#eating!!!, #steak???. for #dinner...... #exactly!,,.: #yes?:", v);
        EXPECT_TRUE(found);
        EXPECT_EQ(5, v.size());
        EXPECT_EQ("eating", v[0]);
        EXPECT_EQ("steak", v[1]);
        EXPECT_EQ("dinner", v[2]);
        EXPECT_EQ("exactly", v[3]);
        EXPECT_EQ("yes", v[4]);
    }
}
Exemple #23
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// Read data from file, build the index, and save the index to disk
void buildIndex(string data_file, string index_dir)
{
    /// Set up the Schema
    Schema *schema = Schema::create(srch2is::DefaultIndex);
    schema->setPrimaryKey("primaryKey");
    schema->setSearchableAttribute("description", 2);
    schema->setScoringExpression("idf_score*doc_boost");

    /// Create an Analyzer
    Analyzer *analyzer = new Analyzer(NULL, NULL, NULL, NULL, "",
                                      srch2is::STANDARD_ANALYZER);

    /// Create an index writer
    unsigned mergeEveryNSeconds = 2;
    unsigned mergeEveryMWrites = 5;
    unsigned updateHistogramEveryPMerges = 1;
    unsigned updateHistogramEveryQWrites = 5;
    IndexMetaData *indexMetaData = new IndexMetaData( new CacheManager(),
    		mergeEveryNSeconds, mergeEveryMWrites,
    		updateHistogramEveryPMerges, updateHistogramEveryQWrites, index_dir);
    Indexer *indexer = Indexer::create(indexMetaData, analyzer, schema);

    Record *record = new Record(schema);

    unsigned docsCounter = 0;
    string line;

    ifstream data(data_file.c_str());

    /// Read records from file
    /// the file should have two fields, seperated by '^'
    /// the first field is the primary key, the second field is a searchable attribute
    while(getline(data,line))
    {
        unsigned cellCounter = 0;
        stringstream  lineStream(line);
        string cell;

        while(getline(lineStream,cell,'^') && cellCounter < 3 )
        {
            if (cellCounter == 0)
            {
                record->setPrimaryKey(cell.c_str());
            }
            else if (cellCounter == 1)
            {
                record->setSearchableAttributeValue(0, cell);
            }
            else
            {
                float recordBoost = atof(cell.c_str());
                record->setRecordBoost(recordBoost);
            }

            cellCounter++;
        }

        indexer->addRecord(record, analyzer);

        docsCounter++;

        record->clear();
    }

    cout << "#Docs Read:" << docsCounter << endl;

    indexer->commit();
    indexer->save();

    cout << "Index saved." << endl;

    data.close();

    delete indexer;
    delete indexMetaData;
    delete analyzer;
    delete schema;
}
Exemple #24
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// Test using the circle range
void testCircleRange(string directoryName)
{
	// Create a schema
	Schema *schema = Schema::create(LocationIndex);
	schema->setPrimaryKey("list_id"); // integer, by default not searchable
	schema->setSearchableAttribute("title", 2); // searchable text
	schema->setSearchableAttribute("address", 7); // searchable text

    // Create an analyzer
    Analyzer *analyzer = new Analyzer(NULL, NULL, NULL, NULL, "");

    unsigned mergeEveryNSeconds = 3;
    unsigned mergeEveryMWrites = 5;
    unsigned updateHistogramEveryPMerges = 1;
    unsigned updateHistogramEveryQWrites = 5;
	CacheManager *cache = new CacheManager(134217728);
    IndexMetaData *indexMetaData = new IndexMetaData( cache,
    		mergeEveryNSeconds, mergeEveryMWrites,
    		updateHistogramEveryPMerges, updateHistogramEveryQWrites,
    		directoryName);

	Indexer *indexer = Indexer::create(indexMetaData, analyzer, schema);

	// Create five records of 8 attributes and add them to the index
	addGeoRecord(indexer, schema, analyzer, 0, "Tom Smith and Jack Lennon", "Yesterday Once More", 100.0, 100.0);
	addGeoRecord(indexer, schema, analyzer, 1, "George Harris", "Here comes the sun", 110.0, 110.0);
	addGeoRecord(indexer, schema, analyzer, 2, "George Harris", "Here comes the sun", 10.0, 10.0);
	addGeoRecord(indexer, schema, analyzer, 3, "George Harris", "Here comes the sun", -100.0, -100.0);
	addGeoRecord(indexer, schema, analyzer, 4, "George Harris", "Here comes the sun", -110.0, -110.0);
	addGeoRecord(indexer, schema, analyzer, 5, "George Harris", "Here comes the sun", -100.0, 100.0);
	addGeoRecord(indexer, schema, analyzer, 6, "George Harris", "Here comes the sun", 100.0, -100.0);
	addGeoRecord(indexer, schema, analyzer, 7, "George Harris", "Here comes the sun", 101.0, -101.0);

	// commit the index
    bool retval = indexer->commit();
	ASSERT( retval == 1 );
    (void)retval;

    // Storing results of the query and expected results
    vector<vector<unsigned>*> expectedResults;
    vector<vector<GeoElement*>*>  results;

    QueryEvaluatorRuntimeParametersContainer runTimeParameters;
    QueryEvaluator * queryEvaluator = new QueryEvaluator(indexer,&runTimeParameters );


    //Rectangle queryRange(pair(pair(-20,-20),pair(20,20)));
    Point point;
    point.x = 100; point.y = 100;
    Circle circle(point,30);
    boost::shared_ptr<QuadTreeRootNodeAndFreeLists> quadtree_ReadView;
    quadtree_ReadView = dynamic_cast<IndexReaderWriter *>(indexer)->getQuadTree_ReadView();
    QuadTreeNode *qt = quadtree_ReadView->root;
    qt->rangeQuery(results,circle);
    vector<unsigned> res;

    res.push_back(getExternalId(queryEvaluator,0));
    res.push_back(getExternalId(queryEvaluator,1));
    res.push_back(getExternalId(queryEvaluator,2));

    expectedResults.push_back(&res);

    verifyResults(results,expectedResults);

	delete indexer;
    delete indexMetaData;
	delete analyzer;
	delete schema;
}
Exemple #25
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TEST(IndexerTest, testPurgeByUserSingleItem) {
    Indexer i;
    const string username = "******";
    const uint64_t postId = 666;
    const TTopics topics = {"check", "source", "html"};
    EXPECT_TRUE(i.index(topics, username, postId));
    EXPECT_TRUE(i.hasPostTopics(postId));
    EXPECT_TRUE(i.hasTopicItem("check"));
    EXPECT_TRUE(i.hasTopicItem("source"));
    EXPECT_TRUE(i.hasTopicItem("html"));

    EXPECT_FALSE(i.purgeByUser("kim"));
    EXPECT_TRUE(i.purgeByUser(username));

    EXPECT_FALSE(i.hasPostTopics(postId));
    EXPECT_FALSE(i.hasTopicItem("check"));
    EXPECT_FALSE(i.hasTopicItem("source"));
    EXPECT_FALSE(i.hasTopicItem("html"));
}
Exemple #26
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void I2C::setStage(I2C::Stage stageCode){
  stage = stageCode;
  if(stageTrace.hasNext()) {
    stageTrace.next() = stageCode;
  }
}
Exemple #27
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TEST(IndexerTest, testPurgeByUser) {
    Indexer i;
    const string username1 = "val";
    const uint64_t postId1 = 666;
    const string username2 = "kim";
    const uint64_t postId2 = 777;

    EXPECT_TRUE(i.index(TTopics({"href", "cv", "date"}), username1, postId1));
    EXPECT_TRUE(i.index(TTopics({"cv"}), username1, postId1 + 1));

    EXPECT_TRUE(i.hasPostTopics(postId1));
    EXPECT_TRUE(i.hasPostTopics(postId1 + 1));
    EXPECT_FALSE(i.hasPostTopics(postId2));
    EXPECT_TRUE(i.hasTopicItem("href"));
    EXPECT_TRUE(i.hasTopicItem("cv"));
    EXPECT_TRUE(i.hasTopicItem("date"));

    EXPECT_EQ(2, i.getTopicItem("cv").postsCount);

    EXPECT_TRUE(i.index(TTopics({"href", "cv"}), username2, postId2));
    EXPECT_TRUE(i.index(TTopics({"cv"}), username2, postId2 + 1));

    EXPECT_TRUE(i.hasPostTopics(postId2));
    EXPECT_TRUE(i.hasPostTopics(postId2 + 1));
    EXPECT_EQ(4, i.getTopicItem("cv").postsCount);
    EXPECT_EQ(2, i.getTopicItem("href").postsCount);

    EXPECT_TRUE(i.purgeByUser(username1));

    EXPECT_FALSE(i.hasPostTopics(postId1));
    EXPECT_FALSE(i.hasPostTopics(postId1 + 1));

    EXPECT_TRUE(i.hasPostTopics(postId2));
    EXPECT_TRUE(i.hasPostTopics(postId2 + 1));
    EXPECT_EQ(2, i.getTopicItem("cv").postsCount);
    EXPECT_EQ(1, i.getTopicItem("href").postsCount);
    EXPECT_FALSE(i.hasTopicItem("date"));

    EXPECT_TRUE(i.purgeByUser(username2));

    EXPECT_FALSE(i.hasPostTopics(postId2));
    EXPECT_FALSE(i.hasPostTopics(postId2 + 1));
    EXPECT_FALSE(i.hasTopicItem("cv"));
    EXPECT_FALSE(i.hasTopicItem("href"));
}
Exemple #28
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TEST(IndexerTest, testSizes) {
    Indexer i;

    EXPECT_TRUE(i.index({"Y",}, "val", 1));
    EXPECT_EQ(1, i.getTopicItemsSize());
    EXPECT_EQ(1, i.getPostTopicsSize());
    EXPECT_EQ(1, i.getUserTopicsSize());

    EXPECT_TRUE(i.index({"m"}, "val", 1));
    EXPECT_EQ(2, i.getTopicItemsSize());
    EXPECT_EQ(1, i.getPostTopicsSize());
    EXPECT_EQ(1, i.getUserTopicsSize());

    EXPECT_TRUE(i.index({"d"}, "val", 2));
    EXPECT_EQ(3, i.getTopicItemsSize());
    EXPECT_EQ(2, i.getPostTopicsSize());
    EXPECT_EQ(1, i.getUserTopicsSize());

    EXPECT_TRUE(i.index({"find"}, "kim", 3));
    EXPECT_EQ(4, i.getTopicItemsSize());
    EXPECT_EQ(3, i.getPostTopicsSize());
    EXPECT_EQ(2, i.getUserTopicsSize());

    EXPECT_TRUE(i.index({"Y"}, "kim", 3));
    EXPECT_EQ(4, i.getTopicItemsSize());
    EXPECT_EQ(3, i.getPostTopicsSize());
    EXPECT_EQ(2, i.getUserTopicsSize());

    EXPECT_TRUE(i.purgeByUser("val"));

    EXPECT_EQ(2, i.getTopicItemsSize());
    EXPECT_EQ(1, i.getPostTopicsSize());
    EXPECT_EQ(1, i.getUserTopicsSize());

    EXPECT_TRUE(i.purgeByUser("kim"));

    EXPECT_EQ(0, i.getTopicItemsSize());
    EXPECT_EQ(0, i.getPostTopicsSize());
    EXPECT_EQ(0, i.getUserTopicsSize());

    EXPECT_TRUE(i.index({"find", "admin", "page"}, "kim", 4));
    EXPECT_EQ(3, i.getTopicItemsSize());
    EXPECT_EQ(1, i.getPostTopicsSize());
    EXPECT_EQ(1, i.getUserTopicsSize());

}
void test1()
{
    Schema *schema = Schema::create(srch2::instantsearch::DefaultIndex);

    schema->setPrimaryKey("article_id"); // integer, not searchable

    schema->setSearchableAttribute("article_id"); // convert id to searchable text
    schema->setSearchableAttribute("article_authors", 2); // searchable text
    schema->setSearchableAttribute("article_title", 7); // searchable text

    // create an analyzer
    SynonymContainer *syn = SynonymContainer::getInstance("", SYNONYM_DONOT_KEEP_ORIGIN);
    syn->init();
    Analyzer *analyzer = new Analyzer(NULL, NULL, NULL, syn, "");
    
    unsigned mergeEveryNSeconds = 3;
    unsigned mergeEveryMWrites = 5;
    unsigned updateHistogramEveryPMerges = 1;
    unsigned updateHistogramEveryQWrites = 5;
    string INDEX_DIR = "test";
    IndexMetaData *indexMetaData = new IndexMetaData( new CacheManager(),
    		mergeEveryNSeconds, mergeEveryMWrites,
    		updateHistogramEveryPMerges, updateHistogramEveryQWrites,
    		INDEX_DIR);
    
    Indexer *index = Indexer::create(indexMetaData, analyzer, schema);
    Record *record = new Record(schema);
    char* authorsCharStar = new char[30];
    char* titleCharStar = new char[30];

    //generate random characers
    srand ( time(NULL) );
    // create a record of 3 attributes
    for (unsigned i = 0; i < 1000; i++)
    {
        record->setPrimaryKey(i + 1000);

        sprintf(authorsCharStar,"John %cLen%cnon",(rand() % 50)+65,(rand() % 10)+65);
        string authors = string(authorsCharStar);
        record->setSearchableAttributeValue("article_authors", authors);

        sprintf(titleCharStar,"Yesterday %cOnc%ce %cMore",
                (rand()%59)+65, (rand()%59)+65, (rand()%10)+65);
        string title = string(titleCharStar);
        record->setSearchableAttributeValue("article_title", title);

        record->setRecordBoost(rand() % 100);
        index->addRecord(record, analyzer);

        // for creating another record
        record->clear();
    }

    // build the index
    index->commit();

    //indexer->printNumberOfBytes();

    delete[] authorsCharStar;
    delete[] titleCharStar;
    delete record;
    delete index;
    delete analyzer;
    delete schema;
}
void addRecords()
{
    ///Create Schema
    Schema *schema = Schema::create(srch2::instantsearch::DefaultIndex);
    schema->setPrimaryKey("article_id"); // integer, not searchable
    schema->setSearchableAttribute("article_id"); // convert id to searchable text
    schema->setSearchableAttribute("article_authors", 2); // searchable text
    schema->setSearchableAttribute("article_title", 7); // searchable text
    
    SynonymContainer *syn = SynonymContainer::getInstance("", SYNONYM_DONOT_KEEP_ORIGIN);
    syn->init();
    Record *record = new Record(schema);
    Analyzer *analyzer = new Analyzer(NULL, NULL, NULL, syn, "");

    unsigned mergeEveryNSeconds = 3;
    unsigned mergeEveryMWrites = 5;
    unsigned updateHistogramEveryPMerges = 1;
    unsigned updateHistogramEveryQWrites = 5;
    string INDEX_DIR = ".";
    IndexMetaData *indexMetaData = new IndexMetaData( NULL,
    		mergeEveryNSeconds, mergeEveryMWrites,
    		updateHistogramEveryPMerges, updateHistogramEveryQWrites,
    		INDEX_DIR);
    Indexer *index = Indexer::create(indexMetaData, analyzer, schema);
    
    record->setPrimaryKey(1001);
    record->setSearchableAttributeValue("article_authors", "Tom Smith and Jack Lennon");
    record->setSearchableAttributeValue("article_title", "come Yesterday Once More");
    record->setRecordBoost(10);
    index->addRecord(record, analyzer);

    record->clear();
    record->setPrimaryKey(1008);
    record->setSearchableAttributeValue(0, "Jimi Hendrix");
    record->setSearchableAttributeValue(1, "Little wing");
    record->setRecordBoost(90);
    index->addRecord(record, analyzer);

    index->commit();
    //index->commit();
    //index->print_Index();

    std::cout << "print 1 $$$$$$$$$$$$$$" << std::endl;

    record->clear();
    record->setPrimaryKey(1007);
    record->setSearchableAttributeValue(0, "Jimaai Hendaarix");
    record->setSearchableAttributeValue(1, "Littaale waaing");
    record->setRecordBoost(90);
    index->addRecord(record, analyzer);

    //index->print_Index();

    std::cout << "print 2 $$$$$$$$$$$$$$" << std::endl;

    delete schema;
    delete record;
    delete analyzer;
    delete index;
    syn->free();
}