C++ (Cpp) SequenceIteratorConstPtr::equals Exemples

Exemple #1

Fichier : halStatsMain.cpp Projet : dayin1989/hal

void printSequences(ostream& os, AlignmentConstPtr alignment, 
                   const string& genomeName)
{
  const Genome* genome = alignment->openGenome(genomeName);
  if (genome == NULL)
  {
    throw hal_exception(string("Genome ") + genomeName + " not found.");
  }
  if (genome->getNumSequences() > 0)
  {
    SequenceIteratorConstPtr seqIt = genome->getSequenceIterator();
    SequenceIteratorConstPtr seqEnd = genome->getSequenceEndIterator();
    for (; !seqIt->equals(seqEnd); seqIt->toNext())
    {
      if (!seqIt->equals(genome->getSequenceIterator()))
      {
        os << ",";
      }
      os << seqIt->getSequence()->getName();
    }
  }
  os << endl;
}