Exemple #1
0
void list_view::set_row_shown(const boost::dynamic_bitset<>& shown)
{
	assert(generator_);
	assert(shown.size() == get_item_count());

	window* window = get_window();
	assert(window);

	const int selected_row = get_selected_row();

	bool resize_needed = false;
	{
		window::invalidate_layout_blocker invalidate_layout_blocker(*window);

		for(size_t i = 0; i < shown.size(); ++i) {
			generator_->set_item_shown(i, shown[i]);
		}
		generator_->place(generator_->get_origin(),
						  generator_->calculate_best_size());
		// resize_needed = !content_resize_request();
	}

	if(resize_needed) {
		window->invalidate_layout();
	} else {
		// content_grid_->set_visible_rectangle(content_visible_rectangle());
		set_is_dirty(true);
	}

	if(selected_row != get_selected_row()) {
		fire(event::NOTIFY_MODIFIED, *this, nullptr);
	}
}
Exemple #2
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/******************************************************************************
* Remaps the bonds after some of the particles have been deleted.
* Dangling bonds are removed too.
******************************************************************************/
void BondsObject::particlesDeleted(const boost::dynamic_bitset<>& deletedParticlesMask)
{
	// Build map that maps old particle indices to new indices.
	std::vector<size_t> indexMap(deletedParticlesMask.size());
	auto index = indexMap.begin();
	size_t oldParticleCount = deletedParticlesMask.size();
	size_t newParticleCount = 0;
	for(size_t i = 0; i < deletedParticlesMask.size(); i++)
		*index++ = deletedParticlesMask.test(i) ? std::numeric_limits<size_t>::max() : newParticleCount++;

	auto result = modifiableStorage()->begin();
	auto bond = modifiableStorage()->begin();
	auto last = modifiableStorage()->end();
	for(; bond != last; ++bond) {
		// Remove invalid bonds.
		if(bond->index1 >= oldParticleCount || bond->index2 >= oldParticleCount)
			continue;

		// Remove dangling bonds whose particles have gone.
		if(deletedParticlesMask.test(bond->index1) || deletedParticlesMask.test(bond->index2))
			continue;

		// Keep but remap particle indices.
		result->pbcShift = bond->pbcShift;
		result->index1 = indexMap[bond->index1];
		result->index2 = indexMap[bond->index2];
		++result;
	}
	modifiableStorage()->erase(result, last);
	changed();
}
Exemple #3
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const bool PartialPage::getBitmap(const unsigned long sequence) const
{
	if (sequence > bitmap.size()) {
		return false;
	}
	return (bitmap[sequence] == 1);
}
void multimenu_button::select_options(boost::dynamic_bitset<> states)
{
	assert(states.size() == values_.size());
	toggle_states_ = states;
	update_config_from_toggle_states();
	update_label();
}
		void
		DigitalInputWriter::setDigitalInput(const ::boost::dynamic_bitset<>& bitset)
		{
			for (::std::size_t i = 0; i < bitset.size(); ++i)
			{
				this->setDigitalInput(i, bitset[i]);
			}
		}
 void bitset_to_vector( binary_truth_table::cube_type& vec, const boost::dynamic_bitset<> number )
 {
   vec.clear();
   for ( unsigned i = 0u; i < number.size(); ++i )
   {
     vec.push_back( number.test( i ) );
   }
 }
Exemple #7
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const bool PartialPage::setBitmap(const unsigned long sequence)
{
	if (sequence > bitmap.size()) {
		return false;
	}
	bitmap[sequence] = 1;
	return true;
}
Exemple #8
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template<class T> std::vector<T>
bitset_to_vector(const boost::dynamic_bitset<>& b)
{
    std::vector<T> v(b.size());
    for (size_t i=0; i<v.size(); ++i) {
        if (b[i])
            v[i] = 1;
    }
    return v;
}
void decrement(boost::dynamic_bitset<> &bitset)
{
	for (unsigned loop = 0; loop < bitset.size(); ++loop)
	{
		if ((bitset[loop] ^= 0x1) == 0x0)
		{
			break;
		}
	}
}
Exemple #10
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    void serialize(output_archive& ar,
        boost::dynamic_bitset<Block, Alloc> const& bs, unsigned)
    {
        std::size_t num_bits = bs.size();
        std::vector<Block> blocks(bs.num_blocks());
        boost::to_block_range(bs, blocks.begin());

        ar << num_bits;
        ar << blocks;
    }
Exemple #11
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void listbox::set_row_shown(const boost::dynamic_bitset<>& shown)
{
	assert(generator_);
	assert(shown.size() == get_item_count());

	if(generator_->get_items_shown() == shown) {
		LOG_GUI_G << LOG_HEADER << " returning early" << std::endl;
		return;
	}

	window* window = get_window();
	assert(window);

	const int selected_row = get_selected_row();

	bool resize_needed = false;

	// Local scope for invalidate_layout_blocker
	{
		window::invalidate_layout_blocker invalidate_layout_blocker(*window);

		for(size_t i = 0; i < shown.size(); ++i) {
			generator_->set_item_shown(i, shown[i]);
		}

		point best_size = generator_->calculate_best_size();
		generator_->place(generator_->get_origin(), {std::max(best_size.x, content_visible_area().w), best_size.y});

		resize_needed = !content_resize_request();
	}

	if(resize_needed) {
		window->invalidate_layout();
	} else {
		content_grid_->set_visible_rectangle(content_visible_area());
		set_is_dirty(true);
	}

	if(selected_row != get_selected_row()) {
		fire(event::NOTIFY_MODIFIED, *this, nullptr);
	}
}
Exemple #12
0
 //
 // Derive index code from a bitset, that is, return a vector of all indices
 // that are set in the bitset
 //
 std::vector<int> index_code(const boost::dynamic_bitset<>& b)
 {
     std::vector<int> v;
     v.reserve(b.count());
     for (int i=0; i<int(b.size()); ++i) {
         if (b.test(i)) {    //if (b[i] == 1)
             v.push_back(i);
         }
     }
     return v;
 }
bool executive::ReconvergenceTFGen6::eval_Bra(executive::CTAContext &context, 
	const ir::PTXInstruction &instr, 
	const boost::dynamic_bitset<> & branch, 
	const boost::dynamic_bitset<> & fallthrough) {
	
	report("eval_Bra([PC " << context.PC << "])");

	// handle nops
	if (!context.active.count()) { 
		context.PC++;
		return false;
	}
	
	for (unsigned int id = 0, end = branch.size(); id != end; ++id) {
		if (branch[id]) {
			threadPCs[id] = instr.branchTargetInstruction;
		}
	}

	for (unsigned int id = 0, end = fallthrough.size(); id != end; ++id) {
		if (fallthrough[id]) {
			++threadPCs[id];
		}
	}
	
	bool divergent = true;
	
	if (branch.count() == branch.size()) {
		context.PC = instr.branchTargetInstruction;
		divergent = false;
	}
	else if (fallthrough.count() == fallthrough.size()) {
		++context.PC;
		divergent = false;
	}
	else {
		context.PC = instr.reconvergeInstruction;
	}
	
	return divergent;
}
Exemple #14
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void removeDeadInstructions(Trace* trace, const boost::dynamic_bitset<>& live) {
  auto &blocks = trace->getBlocks();
  for (auto it = blocks.begin(), end = blocks.end(); it != end;) {
    auto cur = it; ++it;
    Block* block = *cur;
    block->remove_if([&] (const IRInstruction& inst) {
      assert(inst.getIId() < live.size());
      return !live.test(inst.getIId());
    });
    if (block->empty()) blocks.erase(cur);
  }
}
Exemple #15
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void tlistbox::set_row_shown(const boost::dynamic_bitset<>& shown)
{
	assert(generator_);
	assert(shown.size() == get_item_count());

	if (generator_->get_items_shown() == shown)
	{
		LOG_GUI_G << LOG_HEADER << " returning early" << std::endl;
		return;
	}

	twindow* window = get_window();
	assert(window);

	const int selected_row = get_selected_row();

	bool resize_needed;
	{
		twindow::tinvalidate_layout_blocker invalidate_layout_blocker(*window);

		for(size_t i = 0; i < shown.size(); ++i) {
			generator_->set_item_shown(i, shown[i]);
		}
		tpoint best_size = generator_->calculate_best_size();
		generator_->place(generator_->get_origin(), { std::max(best_size.x, content_visible_area().w), best_size.y });
		resize_needed = !content_resize_request();
	}

	if(resize_needed) {
		window->invalidate_layout();
	} else {
		content_grid_->set_visible_rectangle(content_visible_area());
		set_is_dirty(true);
	}

	if(selected_row != get_selected_row() && callback_value_changed_) {
		callback_value_changed_(*this);
	}
}
void stacked_widget::select_layers(const boost::dynamic_bitset<>& mask)
{
	assert(mask.size() == get_layer_count());

	select_layer_impl([&](unsigned int i)
	{
		if(mask[i]) {
			update_selected_layer_index(i);
		}

		return mask[i];
	});
}
void EditableSceneBody::setLinkVisibilities(const boost::dynamic_bitset<>& visibilities)
{
    int i;
    const int m = numSceneLinks();
    const int n = std::min(m, (int)visibilities.size());
    for(i=0; i < n; ++i){
        sceneLink(i)->setVisible(visibilities[i]);
    }
    while(i < m){
        sceneLink(i)->setVisible(false);
        ++i;
    }
    notifyUpdate(impl->modified);
}
void randomize(boost::dynamic_bitset<> &bitset)
{
	for (unsigned loop = 0; loop < bitset.size(); ++loop)
	{
		double rand_num = (double)rand()/RAND_MAX;

		if (rand_num < 0.1)
		{
			bitset[loop] = true;
		}
		else
		{
			bitset[loop] = false;
		}
	}
}
Exemple #19
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	std::string format_binary(const boost::dynamic_bitset<>& b) {
		std::ostringstream oss;
		oss.imbue(std::locale::classic());
		oss.put('"');
		oss << std::hex << std::setw(1);
		unsigned c = b.size();
		unsigned n = (4 - (c % 4)) & 3;
		oss << n;
		for (unsigned i = 0; i < c + n;) {
			unsigned accum = 0;
			for (int j = 0; j < 4; ++j, ++i) {
				unsigned bit = i < n ? 0 : b.test(c - i + n - 1) ? 1 : 0;
				accum |= bit << (3-j);
			}
			oss << accum;
		}
		oss.put('"');
		return oss.str();
	}
Exemple #20
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inline void insert_if_exists(boost::dynamic_bitset<>& cont, const boost::dynamic_bitset<> *other) {
	if (other && !other->empty()) {
		cont.resize(std::max(cont.size(), other->size()));
		cont |= *other;
	}
}
Exemple #21
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/// \brief Check if the split is informative
///
/// \param p The split
bool informative(const boost::dynamic_bitset<>& p) {
  int N = p.size();
  int C = p.count();
  return (C >= 2) and ((N-C) >= 2);
}
Exemple #22
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Response::Response(bitset<1*BYTE> type, bitset<4*BYTE> ID, boost::dynamic_bitset<> message)
    :type(type), ID(ID), message(message), datasize(message.size()/8)
{
    CRC = bitset<2*BYTE>(createCRC());
}
/******************************************************************************
* Performs the actual rejection of particles.
******************************************************************************/
size_t SliceModifier::filterParticles(boost::dynamic_bitset<>& mask, TimePoint time, TimeInterval& validityInterval)
{
	// Get the required input properties.
	ParticlePropertyObject* const posProperty = expectStandardProperty(ParticleProperty::PositionProperty);
	ParticlePropertyObject* const selProperty = applyToSelection() ? inputStandardProperty(ParticleProperty::SelectionProperty) : nullptr;
	OVITO_ASSERT(posProperty->size() == mask.size());
	OVITO_ASSERT(!selProperty || selProperty->size() == mask.size());

	FloatType sliceWidth = 0;
	if(_widthCtrl) sliceWidth = _widthCtrl->getFloatValue(time, validityInterval);
	sliceWidth *= 0.5;

	Plane3 plane = slicingPlane(time, validityInterval);

	size_t na = 0;
	boost::dynamic_bitset<>::size_type i = 0;
	const Point3* p = posProperty->constDataPoint3();
	const Point3* p_end = p + posProperty->size();

	if(sliceWidth <= 0) {
		if(selProperty) {
			const int* s = selProperty->constDataInt();
			for(; p != p_end; ++p, ++s, ++i) {
				if(*s && plane.pointDistance(*p) > 0) {
					mask.set(i);
					na++;
				}
				else mask.reset(i);
			}
		}
		else {
			for(; p != p_end; ++p, ++i) {
				if(plane.pointDistance(*p) > 0) {
					mask.set(i);
					na++;
				}
				else mask.reset(i);
			}
		}
	}
	else {
		bool invert = inverse();
		if(selProperty) {
			const int* s = selProperty->constDataInt();
			for(; p != p_end; ++p, ++s, ++i) {
				if(*s && invert == (plane.classifyPoint(*p, sliceWidth) == 0)) {
					mask.set(i);
					na++;
				}
				else mask.reset(i);
			}
		}
		else {
			for(; p != p_end; ++p, ++i) {
				if(invert == (plane.classifyPoint(*p, sliceWidth) == 0)) {
					mask.set(i);
					na++;
				}
				else mask.reset(i);
			}
		}
	}
	return na;
}
Exemple #24
0
// finds all possible chiral special cases.
// at the moment this is just candidates for ring stereochemistry
void findChiralAtomSpecialCases(ROMol &mol,
                                boost::dynamic_bitset<> &possibleSpecialCases) {
  PRECONDITION(possibleSpecialCases.size() >= mol.getNumAtoms(),
               "bit vector too small");
  possibleSpecialCases.reset();
  if (!mol.getRingInfo()->isInitialized()) {
    VECT_INT_VECT sssrs;
    MolOps::symmetrizeSSSR(mol, sssrs);
  }
  boost::dynamic_bitset<> atomsSeen(mol.getNumAtoms());
  boost::dynamic_bitset<> atomsUsed(mol.getNumAtoms());
  boost::dynamic_bitset<> bondsSeen(mol.getNumBonds());

  for (ROMol::AtomIterator ait = mol.beginAtoms(); ait != mol.endAtoms();
       ++ait) {
    const Atom *atom = *ait;
    if (atomsSeen[atom->getIdx()]) continue;
    if (atom->getChiralTag() == Atom::CHI_UNSPECIFIED ||
        atom->hasProp(common_properties::_CIPCode) ||
        !mol.getRingInfo()->numAtomRings(atom->getIdx()) ||
        !atomIsCandidateForRingStereochem(mol, atom)) {
      continue;
    }
    // do a BFS from this ring atom along ring bonds and find other
    // stereochemistry candidates.
    std::list<const Atom *> nextAtoms;
    // start with finding viable neighbors
    ROMol::OEDGE_ITER beg, end;
    boost::tie(beg, end) = mol.getAtomBonds(atom);
    while (beg != end) {
      unsigned int bidx = mol[*beg]->getIdx();
      if (!bondsSeen[bidx]) {
        bondsSeen.set(bidx);
        if (mol.getRingInfo()->numBondRings(bidx)) {
          const Atom *oatom = mol[*beg]->getOtherAtom(atom);
          if (!atomsSeen[oatom->getIdx()]) {
            nextAtoms.push_back(oatom);
            atomsUsed.set(oatom->getIdx());
          }
        }
      }
      ++beg;
    }
    INT_VECT ringStereoAtoms(0);
    if (!nextAtoms.empty()) {
      atom->getPropIfPresent(common_properties::_ringStereoAtoms,
                             ringStereoAtoms);
    }

    while (!nextAtoms.empty()) {
      const Atom *ratom = nextAtoms.front();
      nextAtoms.pop_front();
      atomsSeen.set(ratom->getIdx());
      if (ratom->getChiralTag() != Atom::CHI_UNSPECIFIED &&
          !ratom->hasProp(common_properties::_CIPCode) &&
          atomIsCandidateForRingStereochem(mol, ratom)) {
        int same = (ratom->getChiralTag() == atom->getChiralTag()) ? 1 : -1;
        ringStereoAtoms.push_back(same * (ratom->getIdx() + 1));
        INT_VECT oringatoms(0);
        ratom->getPropIfPresent(common_properties::_ringStereoAtoms,
                                oringatoms);
        oringatoms.push_back(same * (atom->getIdx() + 1));
        ratom->setProp(common_properties::_ringStereoAtoms, oringatoms, true);
        possibleSpecialCases.set(ratom->getIdx());
        possibleSpecialCases.set(atom->getIdx());
      }
      // now push this atom's neighbors
      boost::tie(beg, end) = mol.getAtomBonds(ratom);
      while (beg != end) {
        unsigned int bidx = mol[*beg]->getIdx();
        if (!bondsSeen[bidx]) {
          bondsSeen.set(bidx);
          if (mol.getRingInfo()->numBondRings(bidx)) {
            const Atom *oatom = mol[*beg]->getOtherAtom(ratom);
            if (!atomsSeen[oatom->getIdx()] && !atomsUsed[oatom->getIdx()]) {
              nextAtoms.push_back(oatom);
              atomsUsed.set(oatom->getIdx());
            }
          }
        }
        ++beg;
      }
    }  // end of BFS
    if (ringStereoAtoms.size() != 0) {
      atom->setProp(common_properties::_ringStereoAtoms, ringStereoAtoms, true);
      // because we're only going to hit each ring atom once, the first atom we
      // encounter in a ring is going to end up with all the other atoms set as
      // stereoAtoms, but each of them will only have the first atom present. We
      // need to fix that. because the traverse from the first atom only
      // followed ring bonds, these things are all by definition in one ring
      // system. (Q: is this true if there's a spiro center in there?)
      INT_VECT same(mol.getNumAtoms(), 0);
      BOOST_FOREACH (int ringAtomEntry, ringStereoAtoms) {
        int ringAtomIdx =
            ringAtomEntry < 0 ? -ringAtomEntry - 1 : ringAtomEntry - 1;
        same[ringAtomIdx] = ringAtomEntry;
      }
      for (INT_VECT_CI rae = ringStereoAtoms.begin();
           rae != ringStereoAtoms.end(); ++rae) {
        int ringAtomEntry = *rae;
        int ringAtomIdx =
            ringAtomEntry < 0 ? -ringAtomEntry - 1 : ringAtomEntry - 1;
        INT_VECT lringatoms(0);
        mol.getAtomWithIdx(ringAtomIdx)
            ->getPropIfPresent(common_properties::_ringStereoAtoms, lringatoms);
        CHECK_INVARIANT(lringatoms.size() > 0, "no other ring atoms found.");
        for (INT_VECT_CI orae = rae + 1; orae != ringStereoAtoms.end();
             ++orae) {
          int oringAtomEntry = *orae;
          int oringAtomIdx =
              oringAtomEntry < 0 ? -oringAtomEntry - 1 : oringAtomEntry - 1;
          int theseDifferent = (ringAtomEntry < 0) ^ (oringAtomEntry < 0);
          lringatoms.push_back(theseDifferent ? -(oringAtomIdx + 1)
                                              : (oringAtomIdx + 1));
          INT_VECT olringatoms(0);
          mol.getAtomWithIdx(oringAtomIdx)
              ->getPropIfPresent(common_properties::_ringStereoAtoms,
                                 olringatoms);
          CHECK_INVARIANT(olringatoms.size() > 0, "no other ring atoms found.");
          olringatoms.push_back(theseDifferent ? -(ringAtomIdx + 1)
                                               : (ringAtomIdx + 1));
          mol.getAtomWithIdx(oringAtomIdx)
              ->setProp(common_properties::_ringStereoAtoms, olringatoms);
        }
        mol.getAtomWithIdx(ringAtomIdx)
            ->setProp(common_properties::_ringStereoAtoms, lringatoms);
      }

    } else {