// Write data to an open socket, repeat until all data has been sent.
int wxLuaCSocket::Write(const char *buffer_, wxUint32 length_)
{
if ((m_sockstate != SOCKET_CONNECTED) && (m_sockstate != SOCKET_ACCEPTED))
{
AddErrorMessage(wxT("Unable to write to unconnected or unaccepted socket. "));
return 0;
}
int length = length_;
const char *buffer = buffer_;
int num_written = 0;
while (num_written < length)
{
int s = ::send(m_sock, buffer, length - num_written, 0);
if (s == SOCKET_ERROR)
{
AddErrorMessage(wxT("Got a socket error trying to write to socket."));
return num_written;
}
num_written += s;
buffer += s;
}
return num_written;
}
bool wxLuaCSocket::Close()
{
if (m_sockstate != SOCKET_CLOSED)
{
#ifdef WIN32
if (::closesocket(m_sock) == SOCKET_ERROR)
{
AddErrorMessage(wxT("Unable to close socket."));
return false;
}
#else
if (::close(m_sock))
{
AddErrorMessage(wxT("Unable to close socket."));
return false;
}
#endif // WIN32
else
{
m_sockstate = SOCKET_CLOSED;
return true;
}
}
return false;
}
// Read data from an open socket, repeat reading until all data has been read
int wxLuaCSocket::Read(char *buffer_, wxUint32 length_)
{
if ((m_sockstate != SOCKET_CONNECTED) && (m_sockstate != SOCKET_ACCEPTED))
{
AddErrorMessage(wxT("Unable to read from an unconnected or unaccepted socket. "));
return 0;
}
int length = length_;
char *buffer = buffer_;
int num_read = 0;
while (num_read < length)
{
int r = ::recv(m_sock, buffer, length - num_read, 0);
if (r == 0)
return num_read;
if (r == SOCKET_ERROR)
{
AddErrorMessage(wxT("Got a socket error trying to read."));
return num_read;
}
num_read += r;
buffer += r;
}
return num_read;
}
int wxLuawxSocket::Write(const char *buffer, wxUint32 length)
{
wxCHECK_MSG(m_socket, 0, wxT("Invalid wxLuawxSocket"));
if (!IsConnected())
{
AddErrorMessage(wxT("Unable to write to an unconnected or unaccepted socket. "));
return 0;
}
long num_written = 0;
if (m_socket->WaitForWrite(20, 0))
num_written = m_socket->Write(buffer, length).LastCount();
if ((num_written < (long)length) || m_socket->Error())
{
wxString s(wxT("Got a socket error trying to read. "));
if (m_socket->Error())
s += GetLastErrorMsg();
AddErrorMessage(s);
}
return num_written;
}
bool
ArgList::V2QuotedToV2Raw(char const *v1_input,MyString *v2_raw,MyString *errmsg)
{
if(!v1_input) return true;
ASSERT(v2_raw);
// allow leading whitespace
while(isspace(*v1_input)) {
v1_input++;
}
ASSERT(IsV2QuotedString(v1_input));
ASSERT(*v1_input == '"');
v1_input++;
const char *quote_terminated = NULL;
while(*v1_input) {
if(*v1_input == '"') {
v1_input++;
if(*v1_input == '"') {
// Repeated (i.e. escaped) double-quote.
(*v2_raw) += *(v1_input++);
}
else {
quote_terminated = v1_input-1;
break;
}
}
else {
(*v2_raw) += *(v1_input++);
}
}
if(!quote_terminated) {
AddErrorMessage("Unterminated double-quote.",errmsg);
return false;
}
// allow trailing whitespace
while(isspace(*v1_input)) {
v1_input++;
}
if(*v1_input) {
if(errmsg) {
MyString msg;
msg.sprintf(
"Unexpected characters following double-quote. "
"Did you forget to escape the double-quote by repeating it? "
"Here is the quote and trailing characters: %s\n",quote_terminated);
AddErrorMessage(msg.Value(),errmsg);
}
return false;
}
return true;
}
bool wxLuaCSocket::Connect(const wxString &addr, u_short port_number)
{
m_port_number = port_number;
hostent *pHost = NULL;
if (m_sockstate != SOCKET_CLOSED)
{
AddErrorMessage(wxString::Format(wxT("Unable to connect to addr '%s' socket already open."), addr.c_str()));
return false;
}
m_sock = ::socket(AF_INET, SOCK_STREAM, 0);
if (m_sock == INVALID_SOCKET)
{
AddErrorMessage(wxString::Format(wxT("Unable to create client socket for addr '%s'."), addr.c_str()));
return false;
}
unsigned long address = ::inet_addr(wx2lua(addr));
if (address != INADDR_NONE)
pHost = ::gethostbyaddr((const char*) &address, 4, AF_INET);
else
pHost = ::gethostbyname(wx2lua(addr));
if (pHost == NULL)
{
AddErrorMessage(wxString::Format(wxT("Unable to get hostbyaddr or gethostbyname for addr '%s'."), addr.c_str()));
return false;
}
if (pHost->h_addrtype != AF_INET)
{
AddErrorMessage(wxString::Format(wxT("Socket for addr '%s' is wrong type, isn't AF_INET."), addr.c_str()));
return false;
}
memset(&m_sockaddress, 0, sizeof(m_sockaddress));
memcpy(&(m_sockaddress.sin_addr), pHost->h_addr_list[0], pHost->h_length);
m_sockaddress.sin_family = AF_INET;
m_sockaddress.sin_port = htons(port_number);
m_address = lua2wx(inet_ntoa(m_sockaddress.sin_addr));
m_port_number = ntohs(m_sockaddress.sin_port);
if (::connect(m_sock, (sockaddr *) &m_sockaddress, sizeof(m_sockaddress)) == SOCKET_ERROR)
{
AddErrorMessage(wxString::Format(wxT("Unable to connect socket to addr '%s'."), addr.c_str()));
return false;
}
m_sockstate = SOCKET_CONNECTED;
return true;
}
bool
Env::getDelimitedStringV1Raw(MyString *result,MyString *error_msg,char delim) const
{
MyString var, val;
bool emptyString = true;
if(!delim) delim = env_delimiter;
ASSERT(result);
_envTable->startIterations();
while( _envTable->iterate( var, val ) ) {
if(!IsSafeEnvV1Value(var.Value(),delim) ||
!IsSafeEnvV1Value(val.Value(),delim)) {
if(error_msg) {
MyString msg;
msg.sprintf("Environment entry is not compatible with V1 syntax: %s=%s",var.Value(),val.Value());
AddErrorMessage(msg.Value(),error_msg);
}
return false;
}
// only insert the delimiter if there's already an entry...
if( !emptyString ) {
(*result) += delim;
}
WriteToDelimitedString(var.Value(),*result);
if(val != NO_ENVIRONMENT_VALUE) {
WriteToDelimitedString("=",*result);
WriteToDelimitedString(val.Value(),*result);
}
emptyString = false;
}
return true;
}
bool HDFBaseCallsWriter::_WritePulseIndex(const SMRTSequence & read) {
if (HasPulseIndex()) {
if (read.copiedFromBam) {
const PacBio::BAM::BamRecord & record = read.bamRecord;
if (record.HasPulseCall()) {
const std::string & pulsecall = record.PulseCall();
std::vector<uint16_t> data(read.length, 0);
size_t indx = 0;
for(size_t i = 0; i < pulsecall.size(); i++) {
const char base = pulsecall[i];
if (base == 'A' or base == 'C' or base == 'G' or base == 'T') {
assert(indx < read.length);
data[indx] = static_cast<uint16_t>(i);
indx ++;
} else {
assert(base == 'a' or base == 'c' or base == 'g' or base == 't');
}
}
assert(indx == read.length);
pulseIndexArray_.Write(&data[0], read.length);
return true;
}
}
AddErrorMessage(std::string(PacBio::GroupNames::pulseindex) + " absent in read " + read.GetTitle());
return false;
}
return true;
}
HDFPulseWriter::HDFPulseWriter(const std::string& filename, const std::string& basecallerVersion,
const std::map<char, size_t>& baseMap,
const std::vector<PacBio::BAM::BaseFeature>& qvsToWrite,
const H5::FileAccPropList& fileAccPropList)
: HDFWriterBase(filename)
, fileaccproplist_(fileAccPropList)
, basecallsWriter_(nullptr)
, pulsecallsWriter_(nullptr)
, regionsWriter_(nullptr)
{
// open file
outfile_.Open(filename_, H5F_ACC_TRUNC, fileaccproplist_);
// Add PulseData group to the root group '/'
AddChildGroup(outfile_.rootGroup, pulseDataGroup_, PacBio::GroupNames::pulsedata);
if (basecallerVersion.empty()) {
AddErrorMessage("Base caller version must be specified.");
}
// Create a BaseCaller writer.
basecallsWriter_.reset(
new HDFBaseCallsWriter(filename_, pulseDataGroup_, baseMap, basecallerVersion, qvsToWrite));
// Create a PulseCalls writer
pulsecallsWriter_.reset(new HDFPulseCallsWriter(filename_, pulseDataGroup_, baseMap,
basecallerVersion, qvsToWrite));
}
bool
ArgList::V1WackedToV1Raw(char const *v1_input,MyString *v1_raw,MyString *errmsg)
{
if(!v1_input) return true;
ASSERT(v1_raw);
ASSERT(!IsV2QuotedString(v1_input));
while(*v1_input) {
if(*v1_input == '"') {
if(errmsg) {
MyString msg;
msg.sprintf("Found illegal unescaped double-quote: %s",v1_input);
AddErrorMessage(msg.Value(),errmsg);
}
return false;
}
else if(v1_input[0] == '\\' && v1_input[1] == '"') {
// Escaped double-quote.
v1_input++;
(*v1_raw) += *(v1_input++);
}
else {
(*v1_raw) += *(v1_input++);
}
}
return true;
}
wxLuaCSocket* wxLuaCSocket::Accept()
{
if (m_sockstate != SOCKET_LISTENING)
{
AddErrorMessage(wxT("Unable to accept from a socket that's not listening."));
return NULL;
}
sockaddr_in fromAddr = { 0 };
socklen_t length = sizeof(fromAddr);
socket_type acceptedSocket = ::accept(m_sock, (sockaddr *)&fromAddr, &length);
if (acceptedSocket == INVALID_SOCKET)
{
AddErrorMessage(wxT("Unable to accept socket connection."));
return NULL;
}
return new wxLuaCSocket(acceptedSocket, fromAddr);
}
bool wxLuaCSocket::Listen(u_short port_number, int backLog)
{
m_port_number = port_number;
if (m_sockstate != SOCKET_CLOSED)
{
AddErrorMessage(wxT("Failed to create a listening socket, socket already open."));
return false;
}
m_sock = ::socket(AF_INET, SOCK_STREAM, 0);
if (m_sock == INVALID_SOCKET)
{
AddErrorMessage(wxT("Unable to create a listening socket."));
return false;
}
sockaddr_in localAddr = { 0 };
localAddr.sin_family = AF_INET;
localAddr.sin_port = htons(port_number);
localAddr.sin_addr.s_addr = htonl(INADDR_ANY);
if (::bind(m_sock, (sockaddr *) &localAddr, sizeof(localAddr)) == SOCKET_ERROR)
{
AddErrorMessage(wxT("Unable to bind to socket to listen for clients."));
return false;
}
if (::listen(m_sock, backLog) == SOCKET_ERROR)
{
AddErrorMessage(wxT("Unable to listen to bound socket."));
return false;
}
memset(&m_sockaddress, 0, sizeof(m_sockaddress));
m_sockstate = SOCKET_LISTENING;
return true;
}
bool HDFBaseCallsWriter::_WriteSubstitutionTag(const SMRTSequence & read) {
if (HasSubstitutionTag()) {
if (read.substitutionTag == nullptr) {
AddErrorMessage(std::string(PacBio::GroupNames::substitutiontag) + " absent in read " + read.GetTitle());
return false;
} else {
substitutionTagArray_.Write(read.substitutionTag, read.length);
return true;
}
}
return true;
}
bool HDFBaseCallsWriter::_WriteMergeQV(const SMRTSequence & read) {
if (HasMergeQV()) {
if (read.mergeQV.Empty()) {
AddErrorMessage(std::string(PacBio::GroupNames::mergeqv) + " absent in read " + read.GetTitle());
return false;
} else {
mergeQVArray_.Write(read.mergeQV.data, read.length);
return true;
}
}
return true;
}
bool HDFBaseCallsWriter::_WriteIPD(const SMRTSequence & read) {
if (HasIPD()) {
if (read.preBaseFrames == nullptr) {
AddErrorMessage(std::string(PacBio::GroupNames::prebaseframes) + " absent in read " + read.GetTitle());
return false;
} else {
ipdArray_.Write(read.preBaseFrames, read.length);
return true;
}
}
return true;
}
bool HDFBaseCallsWriter::_WritePulseWidth(const SMRTSequence & read) {
if (HasPulseWidth()) {
if (read.widthInFrames == nullptr) {
AddErrorMessage(std::string(PacBio::GroupNames::widthinframes) + " absent in read " + read.GetTitle());
return false;
} else {
pulseWidthArray_.Write(read.widthInFrames, read.length);
return true;
}
}
return true;
}
bool HDFRegionsWriter::Write(const RegionAnnotation &annotation)
{
try {
regionsArray_.WriteRow(annotation.row, HDFRegionsWriter::NCOLS);
} catch (H5::Exception &e) {
std::ostringstream sout;
sout << "Failed to write region annotation " << annotation.GetHoleNumber();
AddErrorMessage(sout.str());
return false;
}
++curRow_;
return true;
}
bool
Env::SetEnvWithErrorMessage( const char *nameValueExpr, MyString *error_msg )
{
char *expr, *delim;
int retval;
if( nameValueExpr == NULL || nameValueExpr[0] == '\0' ) {
return false;
}
// make a copy of nameValueExpr for modifying
expr = strnewp( nameValueExpr );
ASSERT( expr );
// find the delimiter
delim = strchr( expr, '=' );
if(delim == NULL && strstr(expr,"$$")) {
// This environment entry is an unexpanded $$() macro.
// We just want to keep it in the environment verbatim.
SetEnv(expr,NO_ENVIRONMENT_VALUE);
delete[] expr;
return true;
}
// fail if either name or delim is missing
if( expr == delim || delim == NULL ) {
if(error_msg) {
MyString msg;
if(delim == NULL) {
msg.sprintf(
"ERROR: Missing '=' after environment variable '%s'.",
nameValueExpr);
}
else {
msg.sprintf("ERROR: missing variable in '%s'.",expr);
}
AddErrorMessage(msg.Value(),error_msg);
}
delete[] expr;
return false;
}
// overwrite delim with '\0' so we have two valid strings
*delim = '\0';
// do the deed
retval = SetEnv( expr, delim + 1 );
delete[] expr;
return retval;
}
HDFBaseCallsWriter::HDFBaseCallsWriter(const std::string & filename,
HDFGroup & parentGroup,
const std::map<char, size_t> & baseMap,
const std::string & basecallerVersion,
const std::vector<PacBio::BAM::BaseFeature> & qvsToWrite)
: HDFWriterBase(filename)
, parentGroup_(parentGroup)
, qvsToWrite_({})
, basecallerVersion_(basecallerVersion)
, arrayLength_(0)
, zmwWriter_(nullptr)
, zmwMetricsWriter_(nullptr)
{
// Add BaseCalls as a child group to the parent group.
AddChildGroup(parentGroup_, basecallsGroup_, PacBio::GroupNames::basecalls);
if (basecallerVersion.empty()) {
AddErrorMessage("BaseCallerVersion must not be empty!");
return;
}
// Initialize the 'basecall' group.
basecallArray_.Initialize(basecallsGroup_, PacBio::GroupNames::basecall);
qvsToWrite_ = HDFBaseCallsWriter::WritableQVs(qvsToWrite);
// It's ok to only write basecall.
if (qvsToWrite_.size() > 0 and not InitializeQVGroups()) {
AddErrorMessage("Failed to initialize QV Groups.");
return;
}
// Create a zmwWriter.
zmwWriter_.reset(new HDFZMWWriter(filename, basecallsGroup_));
// Create a zmwMetricsWriter.
zmwMetricsWriter_.reset(new HDFZMWMetricsWriter(filename, basecallsGroup_, baseMap));
}
bool
ArgList::AppendArgsV2Quoted(char const *args,MyString *error_msg)
{
if(!IsV2QuotedString(args)) {
AddErrorMessage("Expecting double-quoted input string (V2 format).",error_msg);
return false;
}
MyString v2;
if(!V2QuotedToV2Raw(args,&v2,error_msg)) {
return false;
}
return AppendArgsV2Raw(v2.Value(),error_msg);
}
bool
Env::MergeFromV2Quoted( const char *delimitedString, MyString *error_msg )
{
if(!delimitedString) return true;
if(IsV2QuotedString(delimitedString)) {
MyString v2;
if(!V2QuotedToV2Raw(delimitedString,&v2,error_msg)) {
return false;
}
return MergeFromV2Raw(v2.Value(),error_msg);
}
else {
AddErrorMessage("Expecting a double-quoted environment string (V2 format).",error_msg);
return false;
}
}
void HDFBaseCallsWriter::Close(void) {
this->Flush();
try { _WriteAttributes(); }
catch (H5::Exception e) {
AddErrorMessage("Failed to write attributes to " +
PacBio::GroupNames::basecalls);
}
basecallArray_.Close();
if (HasDeletionQV()) deletionQVArray_.Close();
if (HasDeletionTag()) deletionTagArray_.Close();
if (HasInsertionQV()) insertionQVArray_.Close();
if (HasMergeQV()) mergeQVArray_.Close();
if (HasSubstitutionQV()) substitutionQVArray_.Close();
if (HasSubstitutionTag()) substitutionTagArray_.Close();
if (HasIPD()) ipdArray_.Close();
if (HasPulseWidth()) pulseWidthArray_.Close();
if (HasPulseIndex()) pulseIndexArray_.Close();
}
bool HDFRegionsWriter::WriteAttributes(void)
{
if (curRow_ > 0) {
/*
AddAttribute<std::vector<std::string>>(regionsArray_,
PacBio::AttributeNames::Regions::columnnames,
PacBio::AttributeValues::Regions::columnnames);
AddAttribute<std::vector<std::string>>(
regionsArray_, PacBio::AttributeNames::Regions::regiontypes, regionTypes_);
AddAttribute<std::vector<std::string>>(
regionsArray_, PacBio::AttributeNames::Regions::regiondescriptions,
PacBio::AttributeValues::Regions::regiondescriptions);
AddAttribute<std::vector<std::string>>(regionsArray_,
PacBio::AttributeNames::Regions::regionsources,
PacBio::AttributeValues::Regions::regionsources);
*/
return true;
} else {
AddErrorMessage("Could not write attributes when Regions group is empty.");
return false;
}
}
bool
Env::InsertEnvIntoClassAd( ClassAd *ad, MyString *error_msg, char const *opsys, CondorVersionInfo *condor_version) const
{
bool has_env1 = ad->LookupExpr(ATTR_JOB_ENVIRONMENT1) != NULL;
bool has_env2 = ad->LookupExpr(ATTR_JOB_ENVIRONMENT2) != NULL;
bool requires_env1 = false;
if(condor_version) {
requires_env1 = CondorVersionRequiresV1(*condor_version);
}
if(requires_env1) {
if(has_env2) {
ad->Delete(ATTR_JOB_ENVIRONMENT2);
}
}
if( (has_env2 || !has_env1) && !requires_env1)
{
MyString env2;
if(!getDelimitedStringV2Raw(&env2,error_msg)) {
return false;
}
ad->Assign(ATTR_JOB_ENVIRONMENT2,env2.Value());
}
if(has_env1 || requires_env1) {
// Record the OPSYS that is being used to delimit the environment.
char *lookup_delim = NULL;
char delim = '\0';
if(opsys) {
// Use delimiter for target opsys.
delim = GetEnvV1Delimiter(opsys);
}
else if(ad->LookupString(ATTR_JOB_ENVIRONMENT1_DELIM,&lookup_delim)) {
// Use delimiter that was used previously in this ad.
delim = *lookup_delim;
}
else {
// Use delimiter for the opsys we are currently running under.
delim = env_delimiter;
}
if(!lookup_delim) {
// Save the delimiter that we have chosen, in case the ad
// is read by somebody on a platform that is not the same
// as opsys. Example: we are writing the expanded ad in
// the schedd for a starter on a different opsys, but we
// want shadows to be able to still parse the environment.
char delim_str[2];
delim_str[0] = delim;
delim_str[1] = '\0';
ad->Assign(ATTR_JOB_ENVIRONMENT1_DELIM,delim_str);
}
MyString env1;
bool env1_success = getDelimitedStringV1Raw(&env1,error_msg,delim);
if(lookup_delim) {
free(lookup_delim);
lookup_delim = NULL;
}
if(env1_success) {
ad->Assign(ATTR_JOB_ENVIRONMENT1,env1.Value());
}
else {
if(has_env2) {
// We failed to convert to V1 syntax, but we started
// with V2, so this is a special kind of failure.
// Rather than failing outright, simply stick
// an invalid environment value in the V1 attribute.
// This happens, for example, when the schedd is
// generating the expanded ad to send to an older
// starter that does not understand V2 syntax.
// The end result in this case is to fail when the
// starter tries to read the environment, and then
// we go back and get a new match, which hopefully
// is a machine that understands V2 syntax. A more
// direct mechanism would be nice, but this one should
// at least prevent incorrect behavior.
ad->Assign(ATTR_JOB_ENVIRONMENT1,"ENVIRONMENT_CONVERSION_ERROR");
dprintf(D_FULLDEBUG,"Failed to convert environment to V1 syntax: %s\n",error_msg ? error_msg->Value() : "");
}
else {
// Failed to convert to V1 syntax, and the ad does not
// already contain V2 syntax, so we should assume the
// worst.
AddErrorMessage("Failed to convert to target environment syntax.",error_msg);
return false;
}
}
}
return true;
}
bool
ArgList::AppendArgsV1Raw_win32(char const *args,MyString *error_msg)
{
// Parse an args string in the format expected by the Windows
// function CommandLineToArgv().
while(*args) {
char const *begin_arg = args;
MyString buf = "";
while(*args) {
if(*args == ' ' || *args == '\t' || \
*args == '\n' || *args == '\r') {
break;
}
else if(*args != '"') {
buf += *(args++);
}
else {
// quoted section
char const *begin_quote = args;
args++; //begin quote
while(*args) {
int backslashes = 0;
while(*args == '\\') {
backslashes++;
args++;
}
if(backslashes && *args == '"') {
//2n backslashes followed by quote
// --> n backslashes
//2n+1 backslashes followed by quote
// --> n backslashes followed by quote
while(backslashes >= 2) {
backslashes -= 2;
buf += '\\';
}
if(backslashes) {
buf += *(args++); //literal quote
}
else {
break; //terminal quote
}
}
else if(backslashes) {
//literal backslashes
while(backslashes--) {
buf += '\\';
}
}
else if(*args == '"') {
break; //terminal quote
}
else {
buf += *(args++);
}
}
if(*args != '"') {
MyString msg;
msg.sprintf("Unterminated quote in windows argument string starting here: %s",begin_quote);
AddErrorMessage(msg.Value(),error_msg);
return false;
}
args++;
}
}
if(args > begin_arg) {
ASSERT(args_list.Append(buf));
}
while(*args == ' ' || *args == '\t' || *args == '\n' || *args == '\r')
{
args++;
}
}
return true;
}
STDMETHODIMP CUpdateCallback100Imp::UpdateErrorMessage(const wchar_t *message)
{
AddErrorMessage(message);
return S_OK;
}
bool
ArgList::InsertArgsIntoClassAd(ClassAd *ad,CondorVersionInfo *condor_version,MyString *error_msg)
{
bool has_args1 = ad->LookupExpr(ATTR_JOB_ARGUMENTS1) != NULL;
bool has_args2 = ad->LookupExpr(ATTR_JOB_ARGUMENTS2) != NULL;
bool requires_v1 = false;
bool condor_version_requires_v1 = false;
if(condor_version) {
requires_v1 = CondorVersionRequiresV1(*condor_version);
condor_version_requires_v1 = true;
}
else if(input_was_unknown_platform_v1) {
requires_v1 = true;
}
if( !requires_v1 )
{
MyString args2;
if(!GetArgsStringV2Raw(&args2,error_msg)) return false;
ad->Assign(ATTR_JOB_ARGUMENTS2,args2.Value());
}
else if(has_args2) {
ad->Delete(ATTR_JOB_ARGUMENTS2);
}
if(requires_v1) {
MyString args1;
if(GetArgsStringV1Raw(&args1,error_msg)) {
ad->Assign(ATTR_JOB_ARGUMENTS1,args1.Value());
}
else {
if(condor_version_requires_v1 && !input_was_unknown_platform_v1) {
// We failed to convert to V1 syntax, but otherwise we could
// have converted to V2 syntax.
// Rather than failing outright, simply remove
// all arguments from the ClassAd, which will
// cause failures in older versions of Condor.
// We get here, for example, when the schedd is
// generating the expanded ad to send to an older
// starter that does not understand V2 syntax.
// The end result in this case is to fail when the
// starter tries to read the arguments, and then
// we go back and get a new match, which hopefully
// is a machine that understands V2 syntax. A more
// direct mechanism would be nice, but this one should
// at least prevent incorrect behavior.
ad->Delete(ATTR_JOB_ARGUMENTS1);
ad->Delete(ATTR_JOB_ARGUMENTS2);
if(error_msg) {
dprintf(D_FULLDEBUG,"Failed to convert arguments to V1 syntax: %s\n",error_msg->Value());
}
}
else {
// Failed to convert to V1 syntax, and the ad does not
// already contain V2 syntax, so we should assume the
// worst.
AddErrorMessage("Failed to convert arguments to V1 syntax.",error_msg);
return false;
}
}
}
else if(has_args1) {
ad->Delete(ATTR_JOB_ARGUMENTS1);
}
return true;
}
