int main(int argc, char *argv[]) { int driver = DB_PDB; char *filename = "empty.silo"; int show_all_errors = FALSE; int i, pass; char const * const cnames[3] = {"x","y","z"}; void *coords[3] = {(void*)1,(void*)2,(void*)3}; /* really funky dummy pointers */ void *vars[3] = {(void*)1,(void*)2,(void*)3}; /* really funky dummy pointers */ void const * const vvars[3] = {(void*)1,(void*)2,(void*)3}; /* really funky dummy pointers */ void *var = (void*)1; int iarr[3] = {1,1,1}; /* dummy int array */ int ZDIMS[3] = {0,0,0}; double exts[4] = {0,0,0,0}; DBoptlist *ol = 0; double dtime = 0.0; int hide_from_gui=0; int *gnodeno = 0; int *gzoneno = 0; char *ghostn = 0; char *ghostz = 0; /* Parse command-line */ for (i=1; i<argc; i++) { if (!strncmp(argv[i], "DB_", 3)) { driver = StringToDriver(argv[i]); } else if (!strcmp(argv[i], "show-all-errors")) { show_all_errors = 1; } else if (argv[i][0] != '\0') { fprintf(stderr, "%s: ignored argument `%s'\n", argv[0], argv[i]); } } DBSetDeprecateWarnings(0); DBShowErrors(show_all_errors?DB_ALL_AND_DRVR:DB_NONE, NULL); printf("Creating test file \"%s\".\n", filename); dbfile = DBCreate(filename, DB_CLOBBER, DB_LOCAL, "test empty silo objects", driver); ol = DBMakeOptlist(10); DBAddOption(ol, DBOPT_DTIME, &dtime); DBAddOption(ol, DBOPT_HIDE_FROM_GUI, &hide_from_gui); DBAddOption(ol, DBOPT_NODENUM, gnodeno); DBAddOption(ol, DBOPT_ZONENUM, gzoneno); DBAddOption(ol, DBOPT_GHOST_NODE_LABELS, ghostn); DBAddOption(ol, DBOPT_GHOST_ZONE_LABELS, ghostz); /* first pass confirms we catch bad arguments; second pass confirms we permit empty objects */ for (pass = 0; pass < 2; pass++) { const int dt = DB_FLOAT; const int ct = DB_ZONECENT; const int ZZ = 0; /* Used for sole arg causing emptiness */ if (pass) DBSetAllowEmptyObjects(1); /* Because references to the following objects will not ever appear in a multi-xxx object, we do not currently test for support of empties... DBPutUcdsubmesh, DBPutMrgtree, DBPutMrgvar, DBPutGroupelmap Note: 'ZZ' or 'ZDIMS' is the key argument in each call that triggers an empty */ /* empty curve objects */ ASSERT(DBPutCurve(dbfile,"empty_curvea",coords[0],coords[0],dt,ZZ,OL(ol)),retval<0,retval==0); ASSERT(DBPutCurve(dbfile,"empty_curveb", 0,coords[0],dt,ZZ,OL(ol)),retval<0,retval==0); ASSERT(DBPutCurve(dbfile,"empty_curvec",coords[0], 0,dt,ZZ,OL(ol)),retval<0,retval==0); /* empty point meshes and vars */ ASSERT(DBPutPointmesh(dbfile,"empty_pointmesha",1,coords,ZZ,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutPointmesh(dbfile,"empty_pointmeshb",3, 0,ZZ,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutPointvar(dbfile,"pva","empty_pointmesha",1,vars,ZZ,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutPointvar(dbfile,"pvb","empty_pointmesha",3, 0,ZZ,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutPointvar1(dbfile,"pv1a","empty_pointmesha",var,ZZ,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutPointvar1(dbfile,"pv1b","empty_pointmesha", 0,ZZ,dt,OL(ol)),retval<0,retval==0); /* empty quad meshes and vars (ZDIMS is the magic zero'ing arg) */ ASSERT(DBPutQuadmesh(dbfile,"empty_quadmesha", 0,coords,ZDIMS,1,dt,DB_COLLINEAR,OL(ol)),retval<0,retval==0); ASSERT(DBPutQuadmesh(dbfile,"empty_quadmeshb",cnames, 0,ZDIMS,2,dt,DB_COLLINEAR,OL(ol)),retval<0,retval==0); ASSERT(DBPutQuadmesh(dbfile,"empty_quadmeshc",cnames,coords,ZDIMS,3,dt,DB_COLLINEAR,OL(ol)),retval<0,retval==0); ASSERT(DBPutQuadvar(dbfile,"qva","empty_quadmesha",2, 0,vars,ZDIMS,2,0,0,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutQuadvar(dbfile,"qvb","empty_quadmesha",3,cnames, 0,ZDIMS,3,0,0,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutQuadvar1(dbfile,"qv1a","empty_quadmesha", 0,ZDIMS,ZZ,var,0,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutQuadvar1(dbfile,"qv1b","empty_quadmesha",var,ZDIMS,ZZ, 0,0,dt,ct,OL(ol)),retval<0,retval==0); /* empty ucd meshes, facelists, zonelists and vars */ ASSERT(DBPutUcdmesh(dbfile,"empty_ucdmesh1",3,cnames,coords,ZZ,1,"foo","bar",dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdmesh(dbfile,"empty_ucdmesh2",1, 0,coords,ZZ,1,"foo","bar",dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdmesh(dbfile,"empty_ucdmesh3",2,cnames, 0,ZZ,0,"foo","bar",dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdmesh(dbfile,"empty_ucdmesh3",0, 0, 0,ZZ,0, 0, 0,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutFacelist(dbfile,"empty_facelista",ZZ,0,iarr,1,1,iarr,iarr,iarr,1,iarr,iarr,1),retval<0,retval==0); ASSERT(DBPutFacelist(dbfile,"empty_facelistb",ZZ,0, 0,1,1,iarr,iarr,iarr,1,iarr,iarr,1),retval<0,retval==0); ASSERT(DBPutFacelist(dbfile,"empty_facelistc",ZZ,0,iarr,1,1, 0,iarr,iarr,1,iarr,iarr,1),retval<0,retval==0); ASSERT(DBPutFacelist(dbfile,"empty_facelistd",ZZ,0,iarr,1,1,iarr, 0,iarr,1,iarr,iarr,1),retval<0,retval==0); ASSERT(DBPutFacelist(dbfile,"empty_faceliste",ZZ,0,iarr,1,1,iarr,iarr, 0,1,iarr,iarr,1),retval<0,retval==0); ASSERT(DBPutFacelist(dbfile,"empty_facelistf",ZZ,0,iarr,1,1,iarr,iarr,iarr,1, 0,iarr,1),retval<0,retval==0); ASSERT(DBPutFacelist(dbfile,"empty_facelistg",ZZ,0,iarr,1,1,iarr,iarr,iarr,1,iarr, 0,1),retval<0,retval==0); ASSERT(DBPutZonelist(dbfile,"empty_zonelista",ZZ,1,iarr,10,0,iarr,iarr,10),retval<0,retval==0); ASSERT(DBPutZonelist(dbfile,"empty_zonelistb",ZZ,1, 0,10,0,iarr,iarr,10),retval<0,retval==0); ASSERT(DBPutZonelist(dbfile,"empty_zonelistc",ZZ,1,iarr,10,0, 0,iarr,10),retval<0,retval==0); ASSERT(DBPutZonelist(dbfile,"empty_zonelistd",ZZ,1,iarr,10,0,iarr, 0,10),retval<0,retval==0); ASSERT(DBPutZonelist2(dbfile,"empty_zonelist2a",ZZ,1,iarr,1,0,0,0,iarr,iarr,iarr,1,OL(ol)),retval<0,retval==0); ASSERT(DBPutZonelist2(dbfile,"empty_zonelist2b",ZZ,0, 0,1,3,3,3,iarr,iarr,iarr,1,OL(ol)),retval<0,retval==0); ASSERT(DBPutZonelist2(dbfile,"empty_zonelist2c",ZZ,1,iarr,0,3,3,3, 0,iarr,iarr,1,OL(ol)),retval<0,retval==0); ASSERT(DBPutZonelist2(dbfile,"empty_zonelist2d",ZZ,1,iarr,1,0,3,0,iarr, 0,iarr,0,OL(ol)),retval<0,retval==0); ASSERT(DBPutZonelist2(dbfile,"empty_zonelist2e",ZZ,1,iarr,1,3,0,0,iarr,iarr, 0,1,OL(ol)),retval<0,retval==0); ASSERT(DBPutPHZonelist(dbfile,"empty_phzonelista",ZZ,iarr,1,iarr,cnames[0],1,iarr,1,iarr,0,0,0,OL(ol)),retval<0,retval==0); ASSERT(DBPutPHZonelist(dbfile,"empty_phzonelistb",ZZ, 0,1,iarr,cnames[0],1,iarr,1,iarr,0,0,0,OL(ol)),retval<0,retval==0); ASSERT(DBPutPHZonelist(dbfile,"empty_phzonelistc",ZZ,iarr,1, 0,cnames[0],1,iarr,1,iarr,0,0,0,OL(ol)),retval<0,retval==0); ASSERT(DBPutPHZonelist(dbfile,"empty_phzonelistd",ZZ,iarr,1,iarr, 0,1,iarr,1,iarr,0,0,0,OL(ol)),retval<0,retval==0); ASSERT(DBPutPHZonelist(dbfile,"empty_phzoneliste",ZZ,iarr,1,iarr,cnames[0],1, 0,1,iarr,0,0,0,OL(ol)),retval<0,retval==0); ASSERT(DBPutPHZonelist(dbfile,"empty_phzonelistf",ZZ,iarr,1,iarr,cnames[0],1,iarr,1, 0,0,0,0,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar(dbfile,"uva","empty_ucdmesh1",0,cnames,vars,ZZ,vars,1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar(dbfile,"uvb","empty_ucdmesh1",1, 0,vars,ZZ,vars,1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar(dbfile,"uvc","empty_ucdmesh1",2,cnames, 0,ZZ,vars,1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar(dbfile,"uvd","empty_ucdmesh1",3,cnames,vars,ZZ, 0,1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar(dbfile,"uve","empty_ucdmesh1",3, 0, 0,ZZ, 0,1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar1(dbfile,"uv1a","empty_ucdmesh1",var,ZZ,vars[0],1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar1(dbfile,"uv1b","empty_ucdmesh1", 0,ZZ,vars[0],1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar1(dbfile,"uv1c","empty_ucdmesh1",var,ZZ, 0,1,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutUcdvar1(dbfile,"uv1d","empty_ucdmesh1", 0,ZZ, 0,1,dt,ct,OL(ol)),retval<0,retval==0); /* csg meshes and vars */ ASSERT(DBPutCsgmesh(dbfile,"empty_csgmesh1",2,ZZ, 0,iarr,var,1,dt,exts,"foo",OL(ol)),retval<0,retval==0); ASSERT(DBPutCsgmesh(dbfile,"empty_csgmesh2",2,ZZ,iarr, 0,var,2,dt,exts,"foo",OL(ol)),retval<0,retval==0); ASSERT(DBPutCsgmesh(dbfile,"empty_csgmesh3",3,ZZ,iarr,iarr, 0,3,dt,exts,"foo",OL(ol)),retval<0,retval==0); ASSERT(DBPutCsgmesh(dbfile,"empty_csgmesh4",3,ZZ,iarr,iarr,var,0,dt,exts,"foo",OL(ol)),retval<0,retval==0); ASSERT(DBPutCSGZonelist(dbfile,"empty_csgzonelista",0,iarr,iarr,iarr,0,0,dt,ZZ,iarr,OL(ol)),retval<0,retval==0); ASSERT(DBPutCSGZonelist(dbfile,"empty_csgzonelistb",1, 0,iarr,iarr,0,0,dt,ZZ,iarr,OL(ol)),retval<0,retval==0); ASSERT(DBPutCSGZonelist(dbfile,"empty_csgzonelistc",1,iarr, 0,iarr,0,0,dt,ZZ,iarr,OL(ol)),retval<0,retval==0); ASSERT(DBPutCSGZonelist(dbfile,"empty_csgzonelistd",1,iarr,iarr, 0,0,0,dt,ZZ,iarr,OL(ol)),retval<0,retval==0); ASSERT(DBPutCSGZonelist(dbfile,"empty_csgzoneliste",1,iarr,iarr,iarr,0,0,dt,ZZ, 0,OL(ol)),retval<0,retval==0); ASSERT(DBPutCsgvar(dbfile,"csgva","empty_csgmesh1",0,cnames,vvars,ZZ,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutCsgvar(dbfile,"csgvb","empty_csgmesh1",1, 0,vvars,ZZ,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutCsgvar(dbfile,"csgvc","empty_csgmesh1",1,cnames, 0, ZZ,dt,ct,OL(ol)),retval<0,retval==0); ASSERT(DBPutCsgvar(dbfile,"csgvd","empty_csgmesh1",1,cnames,vvars,ZZ,dt,ct,OL(ol)),retval<0,retval==0); /* empty materials and species */ ASSERT(DBPutMaterial(dbfile,"empty_mata","foo",1,iarr,iarr,ZDIMS,1,iarr,iarr,iarr,vars[0],1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMaterial(dbfile,"empty_matb","foo",1, 0,iarr,ZDIMS,1,iarr,iarr,iarr,vars[0],1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMaterial(dbfile,"empty_matc","foo",1,iarr, 0,ZDIMS,1,iarr,iarr,iarr,vars[0],1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMaterial(dbfile,"empty_matd","foo",1,iarr,iarr,ZDIMS,1, 0,iarr,iarr,vars[0],1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMaterial(dbfile,"empty_mate","foo",1,iarr,iarr,ZDIMS,1,iarr, 0,iarr,vars[0],1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMaterial(dbfile,"empty_matf","foo",1,iarr,iarr,ZDIMS,1,iarr,iarr, 0,vars[0],1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMaterial(dbfile,"empty_matg","foo",1,iarr,iarr,ZDIMS,1,iarr,iarr,iarr, 0,1,dt,OL(ol)),retval<0,retval==0); /* empty matspecies via dims[i] == 0 */ ASSERT(DBPutMatspecies(dbfile,"empty_speca","empty_mata",1,iarr,iarr,ZDIMS,1,1,var,iarr,1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMatspecies(dbfile,"empty_specb","empty_mata",1,iarr,iarr,ZDIMS,2,1,var,iarr,1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMatspecies(dbfile,"empty_specc","empty_mata",1,iarr,iarr,ZDIMS,3,1,var,iarr,1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMatspecies(dbfile,"empty_specd","empty_mata",1,iarr,iarr,ZDIMS,1,1, 0,iarr,1,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMatspecies(dbfile,"empty_spece","empty_mata",1,iarr,iarr,ZDIMS,1,1,var, 0,0,dt,OL(ol)),retval<0,retval==0); /* empty matspeces via nspecies_mf==0 */ { int nd=2, d[2]={3,2}, slm[6]={0,0,-1,-3,0,0}, ml=4, msl[4]={1,2,1,2}, slc[6]={0,0,0,0,0,0}; ASSERT(DBPutMatspecies(dbfile,"empty_specf","empty_mata",1,iarr,slc,d,nd,ZZ,var, 0, 0,dt,OL(ol)),retval<0,retval==0); ASSERT(DBPutMatspecies(dbfile,"empty_specg","empty_mata",1,iarr,slm,d,nd,ZZ,var,msl,ml,dt,OL(ol)),retval<0,retval==0); } } DBClose(dbfile); dbfile = 0; /* Ok, now try to read each empty object to make sure we get what we expect and nothing fails */ dbfile = DBOpen(filename, DB_UNKNOWN, DB_READ); /* test read back of empty curves */ { int i=0; char *cnames[] = {"empty_curvea", "empty_curveb", "empty_curvec", 0}; DBSetDir(dbfile, "DBPutCurve"); while (cnames[i]) { DBcurve *curve = DBGetCurve(dbfile, cnames[i++]); assert(DBIsEmptyCurve(curve)); DBFreeCurve(curve); } DBSetDir(dbfile, ".."); } /* test read back of empty point meshes and vars */ { int i=0; char *pmnames[] = {"empty_pointmesha", "empty_pointmeshb", 0}; DBSetDir(dbfile, "DBPutPointmesh"); while (pmnames[i]) { DBpointmesh *pointmesh = DBGetPointmesh(dbfile, pmnames[i++]); assert(DBIsEmptyPointmesh(pointmesh)); DBFreePointmesh(pointmesh); } DBSetDir(dbfile, ".."); } { int i=0; char *vnames[] = {"pva", "pvb", "pv1a", "pv1b", 0}; DBSetDir(dbfile, "DBPutPointvar"); while (vnames[i]) { DBpointvar *pointvar = DBGetPointvar(dbfile, vnames[i++]); assert(DBIsEmptyPointvar(pointvar)); DBFreePointvar(pointvar); } DBSetDir(dbfile, ".."); } /* test read back of empty quad meshes and vars */ { int i=0; char *qmnames[] = {"empty_quadmesha", "empty_quadmeshb", "empty_quadmeshc", 0}; DBSetDir(dbfile, "DBPutQuadmesh"); while (qmnames[i]) { DBquadmesh *quadmesh = DBGetQuadmesh(dbfile, qmnames[i++]); assert(DBIsEmptyQuadmesh(quadmesh)); DBFreeQuadmesh(quadmesh); } DBSetDir(dbfile, ".."); } { int i=0; char *vnames[] = {"qva" , "qvb", "qv1a", "qv1b", 0}; DBSetDir(dbfile, "DBPutQuadvar"); while (vnames[i]) { DBquadvar *quadvar = DBGetQuadvar(dbfile, vnames[i++]); assert(DBIsEmptyQuadvar(quadvar)); DBFreeQuadvar(quadvar); } DBSetDir(dbfile, ".."); } /* test read back of empty ucd meshes, zonelists and vars */ { int i=0; char *mnames[] = {"empty_ucdmesh1", "empty_ucdmesh2", "empty_ucdmesh3", 0}; DBSetDir(dbfile, "DBPutUcdmesh"); while (mnames[i]) { DBucdmesh *ucdmesh = DBGetUcdmesh(dbfile, mnames[i++]); assert(DBIsEmptyUcdmesh(ucdmesh)); DBFreeUcdmesh(ucdmesh); } DBSetDir(dbfile, ".."); } { int i=0; char *flnames[] = {"empty_facelista", "empty_facelistb", "empty_facelistc", "empty_facelistd", "empty_faceliste", "empty_facelistf", "empty_facelistg", 0}; DBSetDir(dbfile, "DBPutFacelist"); while (flnames[i]) { DBfacelist *fl = DBGetFacelist(dbfile, flnames[i++]); assert(DBIsEmptyFacelist(fl)); DBFreeFacelist(fl); } DBSetDir(dbfile, ".."); } { int i=0; char *zlnames[] = {"empty_zonelista", "empty_zonelistb", "empty_zonelistc", "empty_zonelistd", "empty_zonelist2a", "empty_zonelist2b", "empty_zonelist2c", "empty_zonelist2d", "empty_zonelist2e", 0}; DBSetDir(dbfile, "DBPutZonelist"); while (zlnames[i]) { DBzonelist *zl = DBGetZonelist(dbfile, zlnames[i++]); assert(DBIsEmptyZonelist(zl)); DBFreeZonelist(zl); } DBSetDir(dbfile, ".."); } { int i=0; char *zlnames[] = {"empty_phzonelista", "empty_phzonelistb", "empty_phzonelistc", "empty_phzonelistd", "empty_phzoneliste", "empty_phzonelistf", 0}; DBSetDir(dbfile, "DBPutPHZonelist"); while (zlnames[i]) { DBphzonelist *zl = DBGetPHZonelist(dbfile, zlnames[i++]); assert(DBIsEmptyPHZonelist(zl)); DBFreePHZonelist(zl); } DBSetDir(dbfile, ".."); } { int i=0; char *vnames[] = { "uva", "uvb", "uvc", "uvd", "uve", "uv1a", "uv1b", "uv1c", "uv1d", 0}; DBSetDir(dbfile, "DBPutUcdvar"); while (vnames[i]) { DBucdvar *ucdvar = DBGetUcdvar(dbfile, vnames[i++]); assert(DBIsEmptyUcdvar(ucdvar)); DBFreeUcdvar(ucdvar); } DBSetDir(dbfile, ".."); } /* test read back of empty csg meshes and vars */ { int i=0; char *mnames[] = {"empty_csgmesh1", "empty_csgmesh2", "empty_csgmesh3", 0}; DBSetDir(dbfile, "DBPutCsgmesh"); while (mnames[i]) { DBcsgmesh *csgmesh = DBGetCsgmesh(dbfile, mnames[i++]); assert(DBIsEmptyCsgmesh(csgmesh)); DBFreeCsgmesh(csgmesh); } DBSetDir(dbfile, ".."); } { int i=0; char *zlnames[] = {"empty_csgzonelista", "empty_csgzonelistb", "empty_csgzonelistc", "empty_csgzonelistd", "empty_csgzoneliste", 0}; DBSetDir(dbfile, "DBPutCSGZonelist"); while (zlnames[i]) { DBcsgzonelist *zl = DBGetCSGZonelist(dbfile, zlnames[i++]); assert(DBIsEmptyCSGZonelist(zl)); DBFreeCSGZonelist(zl); } DBSetDir(dbfile, ".."); } { int i=0; char *vnames[] = {"csgva", "csgvb", "csgvc", "csgvd", 0}; DBSetDir(dbfile, "DBPutCsgvar"); while (vnames[i]) { DBcsgvar *csgvar = DBGetCsgvar(dbfile, vnames[i++]); assert(DBIsEmptyCsgvar(csgvar)); DBFreeCsgvar(csgvar); } DBSetDir(dbfile, ".."); } /* test read back of empty materials and matspecies */ { int i=0; char *vnames[] = {"empty_mata", "empty_matb", "empty_matc", "empty_matd", "empty_mate", "empty_matf", "empty_matg", 0}; DBSetDir(dbfile, "DBPutMaterial"); while (vnames[i]) { DBmaterial *mat = DBGetMaterial(dbfile, vnames[i++]); assert(DBIsEmptyMaterial(mat)); DBFreeMaterial(mat); } DBSetDir(dbfile, ".."); } { int i=0; char *vnames[] = {"empty_speca", "empty_specb", "empty_specc", "empty_specd", "empty_spece", "empty_specf", "empty_specg", 0}; DBSetDir(dbfile, "DBPutMatspecies"); while (vnames[i]) { DBmatspecies *spec = DBGetMatspecies(dbfile, vnames[i++]); assert(DBIsEmptyMatspecies(spec)); DBFreeMatspecies(spec); } DBSetDir(dbfile, ".."); } DBClose(dbfile); CleanupDriverStuff(); return 0; }
Databox *ReadSilo(char *filename, double default_value) { #ifdef HAVE_SILO Databox *v; double X, Y, Z; int NX, NY, NZ; double DX, DY, DZ; int x, y, z; int nx, ny, nz; int j, k; double *ptr; int err = -1; DBfile *db; double epsi = 1.0E-16; char *current_path = NULL; char *path = NULL; char *slash = strchr(filename, '/'); float *localcoords[3]; if(slash) { path = (char *)malloc(MAXPATHLEN); strncpy(path, filename, slash - filename); path[slash - filename] = 0; filename = strdup(slash + 1); } else { filename = strdup(filename); } if(path) { current_path = (char *)malloc(MAXPATHLEN); getwd(current_path); chdir(path); } // db = DBOpen(filename, DB_PDB, DB_READ); db = DBOpen(filename, DB_UNKNOWN, DB_READ); if(db == NULL) { printf("Failed to open SILO file %s\n", filename); return NULL; } double origin[3]; err = DBReadVar(db, "origin", &origin); if(err < 0) { printf("Failed to read meta data\n"); return NULL; } X = origin[0]; Y = origin[1]; Z = origin[2]; int size[3]; err = DBReadVar(db, "size", &size); if(err < 0) { printf("Failed to read meta data\n"); return NULL; } NX = size[0]; NY = size[1]; NZ = size[2]; double delta[3]; err = DBReadVar(db, "delta", &delta); if(err < 0) { printf("Failed to read meta data\n"); return NULL; } DX = delta[0]; DY = delta[1]; DZ = delta[2]; /* create the new databox structure */ if ((v = NewDataboxDefault(NX, NY, NZ, X, Y, Z, DX, DY, DZ, default_value)) == NULL) { return((Databox *)NULL); } DBtoc *toc = DBGetToc(db); if ( toc == NULL ) { printf("Error: Silo get get TOC failed for %s\n", filename); return NULL; } char **multivar_names = toc -> multivar_names; int nmultivar = toc -> nmultivar; /* Check to see if file has a multivar in it to determine file format being used */ if(nmultivar == 0) { DBquadvar *var = DBGetQuadvar(db, "variable"); if(var == NULL) { printf("Error: Silo failed to get quadvar %s \n", "variable"); return NULL; } memcpy(DataboxCoeff(v, 0, 0, 0), var -> vals[0], NX*NY*NZ * sizeof(double)); DBFreeQuadvar(var); } else { DBmultivar *multivar = DBGetMultivar(db, multivar_names[0]); if ( multivar == NULL ) { printf("Error: Silo get multivar failed for %s\n", multivar_names[0]); return NULL; } int nvars = multivar -> nvars; char **varnames = multivar -> varnames; int i; int m; for(m = 0; m < nvars; m++) { char *proc_filename; char *seperator = ":"; proc_filename = strtok(varnames[m], seperator); char *proc_varname; proc_varname = strtok(NULL, seperator); /* printf("multivar nvar: %d \n", nvars); printf("multivar proc_varname: %s \n", proc_varname); printf("multivar proc_filename: %s \n", proc_filename); */ if(proc_filename == NULL) { printf("Error malformed multivar name %s in SILO file \n", varnames[m]); return NULL; } DBfile *proc_db; // proc_db = DBOpen(proc_filename, DB_PDB, DB_READ); proc_db = DBOpen(proc_filename, DB_UNKNOWN, DB_READ); if(db == NULL) { printf("Failed to open SILO file %s\n", filename); return NULL; } if(proc_varname == NULL) { printf("Error malformed multivar name %s in SILO file \n", varnames[m]); return NULL; } DBquadvar *var = DBGetQuadvar(proc_db, proc_varname); if(var == NULL) { printf("Error: Silo failed to get quadvar %s \n", varnames[m]); return NULL; } /* now we need to get the mesh, for PMPIO compat */ DBquadmesh *mesh = DBGetQuadmesh(proc_db, var -> meshname); if(mesh == NULL) { printf("Error: Silo failed to get quadmesh %s \n", varnames[m]); return NULL; } nx = var -> dims[0]; ny = var -> dims[1]; nz = var -> dims[2]; /* Casting here is a dangerous */ localcoords[0] = (float *)mesh -> coords[0]; localcoords[1] = (float *)mesh -> coords[1]; localcoords[2] = (float *)mesh -> coords[2]; int index_origin[3]; err = DBReadVar(proc_db, "index_origin", &index_origin); if(err < 0) { printf("Failed to read meta data\n"); return NULL; } /* becuase of multi or single file compatibility we need to * grab the actual mesh from that variable. Then we need to * determine the origin from the mesh[0][0], [1][0] and [2][0] * divided by DX, DY and DZ since there are multiple origins * in a single file and this is now ambiguous. */ x = index_origin[0]; y = index_origin[1]; z = index_origin[2]; x = round( (localcoords[0][0] - (X - DX / 2.0)) / DX); y = round( (localcoords[1][0] - (Y - DY / 2.0)) / DY); z = round( (localcoords[2][0] - (Z - DZ / 2.0)) / DZ); int index = 0; double *vals = (double *)var -> vals[0]; for (k = 0; k < nz; k++) { for (j = 0; j < ny; j++) { for (i = 0; i < nx; i++) { ptr = DataboxCoeff(v, x + i, y + j, z + k); *ptr = vals[index]; index++; } } } DBFreeQuadvar(var); DBClose(proc_db); } DBFreeMultivar(multivar); } DBClose(db); if(path) { free(path); } if(current_path) { chdir(current_path); free(current_path); } free(filename); /* free(localcoords[0]); free(localcoords[1]); free(localcoords[2]); */ return v; #else #endif }