int MPIX_Neighbor_allgather_x(const void *sendbuf, MPI_Count sendcount, MPI_Datatype sendtype, void *recvbuf, MPI_Count recvcount, MPI_Datatype recvtype, MPI_Comm comm) { int rc = MPI_SUCCESS; if (likely (sendcount <= bigmpi_int_max && recvcount <= bigmpi_int_max )) { rc = MPI_Neighbor_allgather(sendbuf, (int)sendcount, sendtype, recvbuf, (int)recvcount, recvtype, comm); } else if (sendcount > bigmpi_int_max && recvcount <= bigmpi_int_max ) { MPI_Datatype newsendtype; BigMPI_Type_contiguous(0,sendcount, sendtype, &newsendtype); MPI_Type_commit(&newsendtype); rc = MPI_Neighbor_allgather(sendbuf, 1, newsendtype, recvbuf, (int)recvcount, recvtype, comm); MPI_Type_free(&newsendtype); } else if (sendcount <= bigmpi_int_max && recvcount > bigmpi_int_max ) { MPI_Datatype newrecvtype; BigMPI_Type_contiguous(0,recvcount, recvtype, &newrecvtype); MPI_Type_commit(&newrecvtype); rc = MPI_Neighbor_allgather(sendbuf, (int)sendcount, sendtype, recvbuf, 1, newrecvtype, comm); MPI_Type_free(&newrecvtype); } else { MPI_Datatype newsendtype, newrecvtype; BigMPI_Type_contiguous(0,sendcount, sendtype, &newsendtype); BigMPI_Type_contiguous(0,recvcount, recvtype, &newrecvtype); MPI_Type_commit(&newsendtype); MPI_Type_commit(&newrecvtype); rc = MPI_Neighbor_allgather(sendbuf, 1, newsendtype, recvbuf, 1, newrecvtype, comm); MPI_Type_free(&newsendtype); MPI_Type_free(&newrecvtype); } return rc; }
static int Neighbor_allgather(HostRead<I32> sources, HostRead<I32> destinations, const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm) { #if MPI_VERSION < 3 static int const tag = 42; int indegree, outdegree; indegree = sources.size(); outdegree = destinations.size(); int recvwidth; CALL(MPI_Type_size(sendtype, &recvwidth)); MPI_Request* recvreqs = new MPI_Request[indegree]; MPI_Request* sendreqs = new MPI_Request[outdegree]; for (int i = 0; i < indegree; ++i) CALL(MPI_Irecv(static_cast<char*>(recvbuf) + i * recvwidth, recvcount, recvtype, sources[i], tag, comm, recvreqs + i)); CALL(MPI_Barrier(comm)); for (int i = 0; i < outdegree; ++i) CALL(MPI_Isend(sendbuf, sendcount, sendtype, destinations[i], tag, comm, sendreqs + i)); CALL(MPI_Waitall(outdegree, sendreqs, MPI_STATUSES_IGNORE)); delete[] sendreqs; CALL(MPI_Waitall(indegree, recvreqs, MPI_STATUSES_IGNORE)); delete[] recvreqs; return MPI_SUCCESS; #else (void)sources; (void)destinations; return MPI_Neighbor_allgather( sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, comm); #endif // end if MPI_VERSION < 3 }
void neighbor_allgather(data& d, MPI_Comm neighborhood){ int send_size = d.spikeout_.size(); MPI_Neighbor_allgather(&send_size, 1, MPI_INT, &d.nin_[0], 1, MPI_INT, neighborhood); }
int main(int argc, char *argv[]) { int errs = 0; int wrank, wsize; int periods[1] = { 0 }; MPI_Comm cart, dgraph, graph; MPI_Init(&argc, &argv); MPI_Comm_rank(MPI_COMM_WORLD, &wrank); MPI_Comm_size(MPI_COMM_WORLD, &wsize); #if defined(TEST_NEIGHB_COLL) /* a basic test for the 10 (5 patterns x {blocking,nonblocking}) MPI-3 * neighborhood collective routines */ /* (wrap)--> 0 <--> 1 <--> ... <--> p-1 <--(wrap) */ MPI_Cart_create(MPI_COMM_WORLD, 1, &wsize, periods, /*reorder=*/0, &cart); /* allgather */ { int sendbuf[1] = { wrank }; int recvbuf[2] = { 0xdeadbeef, 0xdeadbeef }; /* should see one send to each neighbor (rank-1 and rank+1) and one receive * each from same */ MPI_Neighbor_allgather(sendbuf, 1, MPI_INT, recvbuf, 1, MPI_INT, cart); if (wrank == 0) check(recvbuf[0] == 0xdeadbeef); else check(recvbuf[0] == wrank - 1); if (wrank == wsize - 1) check(recvbuf[1] == 0xdeadbeef); else check(recvbuf[1] == wrank + 1); } /* allgatherv */ { int sendbuf[1] = { wrank }; int recvbuf[2] = { 0xdeadbeef, 0xdeadbeef }; int recvcounts[2] = { 1, 1 }; int displs[2] = { 1, 0}; /* should see one send to each neighbor (rank-1 and rank+1) and one receive * each from same, but put them in opposite slots in the buffer */ MPI_Neighbor_allgatherv(sendbuf, 1, MPI_INT, recvbuf, recvcounts, displs, MPI_INT, cart); if (wrank == 0) check(recvbuf[1] == 0xdeadbeef); else check(recvbuf[1] == wrank - 1); if (wrank == wsize - 1) check(recvbuf[0] == 0xdeadbeef); else check(recvbuf[0] == wrank + 1); } /* alltoall */ { int sendbuf[2] = { -(wrank+1), wrank+1 }; int recvbuf[2] = { 0xdeadbeef, 0xdeadbeef }; /* should see one send to each neighbor (rank-1 and rank+1) and one * receive each from same */ MPI_Neighbor_alltoall(sendbuf, 1, MPI_INT, recvbuf, 1, MPI_INT, cart); if (wrank == 0) check(recvbuf[0] == 0xdeadbeef); else check(recvbuf[0] == wrank); if (wrank == wsize - 1) check(recvbuf[1] == 0xdeadbeef); else check(recvbuf[1] == -(wrank + 2)); } /* alltoallv */ { int sendbuf[2] = { -(wrank+1), wrank+1 }; int recvbuf[2] = { 0xdeadbeef, 0xdeadbeef }; int sendcounts[2] = { 1, 1 }; int recvcounts[2] = { 1, 1 }; int sdispls[2] = { 0, 1 }; int rdispls[2] = { 1, 0 }; /* should see one send to each neighbor (rank-1 and rank+1) and one receive * each from same, but put them in opposite slots in the buffer */ MPI_Neighbor_alltoallv(sendbuf, sendcounts, sdispls, MPI_INT, recvbuf, recvcounts, rdispls, MPI_INT, cart); if (wrank == 0) check(recvbuf[1] == 0xdeadbeef); else check(recvbuf[1] == wrank); if (wrank == wsize - 1) check(recvbuf[0] == 0xdeadbeef); else check(recvbuf[0] == -(wrank + 2)); } /* alltoallw */ { int sendbuf[2] = { -(wrank+1), wrank+1 }; int recvbuf[2] = { 0xdeadbeef, 0xdeadbeef }; int sendcounts[2] = { 1, 1 }; int recvcounts[2] = { 1, 1 }; MPI_Aint sdispls[2] = { 0, sizeof(int) }; MPI_Aint rdispls[2] = { sizeof(int), 0 }; MPI_Datatype sendtypes[2] = { MPI_INT, MPI_INT }; MPI_Datatype recvtypes[2] = { MPI_INT, MPI_INT }; /* should see one send to each neighbor (rank-1 and rank+1) and one receive * each from same, but put them in opposite slots in the buffer */ MPI_Neighbor_alltoallw(sendbuf, sendcounts, sdispls, sendtypes, recvbuf, recvcounts, rdispls, recvtypes, cart); if (wrank == 0) check(recvbuf[1] == 0xdeadbeef); else check(recvbuf[1] == wrank); if (wrank == wsize - 1) check(recvbuf[0] == 0xdeadbeef); else check(recvbuf[0] == -(wrank + 2)); } MPI_Comm_free(&cart); #endif /* defined(TEST_NEIGHB_COLL) */ MPI_Reduce((wrank == 0 ? MPI_IN_PLACE : &errs), &errs, 1, MPI_INT, MPI_SUM, 0, MPI_COMM_WORLD); if (wrank == 0) { if (errs) { printf("found %d errors\n", errs); } else { printf(" No errors\n"); } } MPI_Finalize(); return 0; }