SoftwareVisualizer::SoftwareVisualizer(bool editable, QWidget * parent) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<Software>()
{
addLabel_("Modify software information.");
addSeparator_();
addLineEdit_(software_name_, "Name");
addLineEdit_(software_version_, "Version");
finishAdding_();
}
ProteinHitVisualizer::ProteinHitVisualizer(bool editable, QWidget * parent) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<ProteinHit>()
{
addLineEdit_(proteinhit_score_, "Score");
addLineEdit_(proteinhit_rank_, "Rank");
addLineEdit_(proteinhit_accession_, "Accession");
addTextEdit_(proteinhit_sequence_, "Sequence");
finishAdding_();
}
DocumentIdentifierVisualizer::DocumentIdentifierVisualizer(bool editable, QWidget * parent) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<DocumentIdentifier>()
{
addLabel_("Modify DocumentIdentifier information");
addSeparator_();
addLineEdit_(identifier_, "Identifier");
addSeparator_();
addLineEdit_(file_path_, "Loaded from file");
addLineEdit_(file_type_, "File type");
finishAdding_();
}
InstrumentVisualizer::InstrumentVisualizer(bool editable, QWidget * parent) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<Instrument>()
{
addLabel_("Modify instrument information.");
addSeparator_();
addLineEdit_(name_, "Name");
addLineEdit_(vendor_, "Vendor");
addLineEdit_(model_, "Model");
addTextEdit_(customizations_, "Customizations");
addComboBox_(ion_optics_, "Ion optics");
finishAdding_();
}
ModificationVisualizer::ModificationVisualizer(bool editable, QWidget * parent) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<Modification>()
{
addLabel_("Modify Modification information");
addSeparator_();
addLineEdit_(treatmenttype_, "Treatment type");
addTextEdit_(treatmentcomment_, "Comment");
addLineEdit_(modificationname_, "Reagent name");
addDoubleLineEdit_(modificationmass_, "Mass change");
addComboBox_(modificationspecificity_, "Specificity Type");
addLineEdit_(modificationAA_, "Affected Amino Acids");
finishAdding_();
}
SampleVisualizer::SampleVisualizer(bool editable, QWidget * parent) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<Sample>()
{
addLabel_("Modify Sample information");
addSeparator_();
addLineEdit_(samplename_, "Name");
addLineEdit_(samplenumber_, "Number");
addLineEdit_(sampleorganism_, "Organism");
addTextEdit_(samplecomment_, "Comment");
addComboBox_(samplestate_, "State");
addDoubleLineEdit_(samplemass_, "Mass (in gram)");
addDoubleLineEdit_(samplevolume_, "Volume (in ml)");
addDoubleLineEdit_(sampleconcentration_, "Concentration (in g/l)");
finishAdding_();
}
PeptideIdentificationVisualizer::PeptideIdentificationVisualizer(bool editable, QWidget * parent, MetaDataBrowser * caller) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<PeptideIdentification>()
{
pidv_caller_ = caller;
addLineEdit_(identifier_, "Identifier<br>(of corresponding ProteinIdentification)");
addSeparator_();
addLineEdit_(score_type_, "Score type");
addBooleanComboBox_(higher_better_, "Higher score is better");
addDoubleLineEdit_(identification_threshold_, "Peptide significance threshold");
addSeparator_();
addLabel_("Show peptide hits with score equal or better than a threshold.");
QPushButton * button;
addLineEditButton_("Score threshold", filter_threshold_, button, "Filter");
connect(button, SIGNAL(clicked()), this, SLOT(updateTree_()));
finishAdding_();
}
ContactPersonVisualizer::ContactPersonVisualizer(bool editable, QWidget * parent) :
BaseVisualizerGUI(editable, parent),
BaseVisualizer<ContactPerson>()
{
addLabel_("Modify ContactPerson information");
addSeparator_();
addLineEdit_(firstname_, "First name");
addLineEdit_(lastname_, "Last name");
addLineEdit_(institution_, "Institution");
addLineEdit_(address_, "Address");
addLineEdit_(email_, "Email");
addLineEdit_(url_, "URL");
addLineEdit_(contact_info_, "Contact info");
finishAdding_();
}
