void GfxDataField::setValue(float value) { prepDrawText(x,y,fntsize); checkShrinkage((char)tft->print(value,place)); }
void GfxDataField::setUnknown() { prepDrawText(x,y,fntsize); checkShrinkage((char)tft->print(F("?"))); }
struct gbStatusTbl* gbBuildState(struct sqlConnection *conn, struct gbSelect* select, struct dbLoadOptions* options, float maxShrinkage, char* tmpDir, int verboseLevel, boolean extFileUpdate, boolean* maxShrinkageExceeded) /* Load status table and find of state of all genbank entries in the release * compared to the database. */ { struct gbStatusTbl* statusTbl; struct selectStatusData ssData; unsigned selectFlags = (select->type | select->release->srcDb); ZeroVar(&ssData); gOptions = options; *maxShrinkageExceeded = FALSE; gbVerbose = verboseLevel; gErrorCnt = 0; loadNonCoding = dbLoadNonCoding(sqlGetDatabase(conn), select); if (loadNonCoding) gbVerbMsg(1, "NOTE: loading non-coding"); gbVerbEnter(3, "build state table"); gbVerbMsg(4, "reading gbSeq accessions"); ssData.select = select; ssData.seqHash = seqTblLoadAcc(conn, select); gbVerbMsg(4, "reading gbStatus"); statusTbl = gbStatusTblSelectLoad(conn, selectFlags, select->accPrefix, selectStatus, &ssData, tmpDir, extFileUpdate, (gbVerbose >= 4)); findNewEntries(select, statusTbl); /* Don't allow deletes when select criteria has changed */ if ((ssData.orgCatDelCnt > 0) && !(gOptions->flags & DBLOAD_LARGE_DELETES)) errAbort("%u entries deleted due to organism category no longer being selected, specify -allowLargeDeletes to override", ssData.orgCatDelCnt); /* check shrinkage unless override */ if ((gOptions->flags & DBLOAD_LARGE_DELETES) == 0) { if (!checkShrinkage(select, maxShrinkage, statusTbl)) *maxShrinkageExceeded = TRUE; } /* don't do other setup if we are going to stop on maxShrinkageExceeded */ if (!*maxShrinkageExceeded) { gbVerbMsg(4, "checking for orphans"); findOrphans(conn, select, ssData.seqHash, statusTbl); if (((gOptions->flags & DBLOAD_INITIAL) == 0)) { gbVerbMsg(4, "checking for type change"); checkForTypeChange(conn, select, statusTbl); } } #ifdef DUMP_HASH_STATS hashPrintStats(ssData.seqHash, "stateSeq", stderr); #endif hashFree(&ssData.seqHash); gbVerbLeave(3, "build state table"); /* always print stats */ fprintf(stderr, "gbLoadRna: selected %s: delete=%u seqChg=%u metaChg=%u extChg=%u new=%u orphan=%u derived=%u noChg=%u\n", gbSelectDesc(select), statusTbl->numDelete, statusTbl->numSeqChg, statusTbl->numMetaChg, statusTbl->numExtChg, statusTbl->numNew, statusTbl->numOrphan, statusTbl->numRebuildDerived, statusTbl->numNoChg); /* this doesn't include large delete errors */ if (gErrorCnt > 0) errAbort("Errors detecting when constructing state table"); return statusTbl; }