int randomBetween(int start, int end)
{
std::uniform_int_distribution<int> dist_n(start, end);
return (dist_n(_generator));
}
int main(int argc, char** argv)
{
if(argc^7){
printf("Usage: ./osil bits seed N G Mu Chi\n");
exit(1);
}
if ((sizeof(int) < 4)|| (sizeof(long int) < 8)){
printf("Assumptions concerning bits are invalid: int has %d bits, unsigned long int has %d bits\n",
(int)(8*sizeof(int)), (int)(8*sizeof(unsigned long)));
return 1;
}
L = atol(argv[1]); // bit length
if (L > 32){
printf("Can't have more thqan 32 bits\n");
return 1;
}
int seed = atoi(argv[2]);
N = (unsigned long)atoi(argv[3]); // no. of individuals in finite population
G = (unsigned long)atol(argv[4]); // no. of generations
Mu_n = atof(argv[5]);
Chi_n = atof(argv[6]);
int i,j, n, m;
double *d1, *d2, dst1, dst2;
unsigned long *tmp_ptr;
char fname[200]; // file name
FILE *fp; // data file pointer
d1 = calloc(G, sizeof(double));
d2 = calloc(G, sizeof(double));
initrand(seed);
setup();
init(); // initializes memory for pop, M and Cr and also installs values for these
merge_sort(Pop[0], N);
// infinite population simulation
calc_px_from_finite_population(P0); // calculates haploids proportion using finite set
P1 = g_w(G, P0, P1);
display_p(P1);
// find oscillating points for infinite population
if( osc_points(P0, P1, P2, P3) ){ // if oscillation occurs
{ // compute distance between finite population to oscillating points
int a, b;
//finite population simulation
for(i = 0; i < G; i++){ // evolve through G generations
for(j = 0; j < N; j++){ // reproduce N offsprings
a = rnd(N); b = rnd(N);
reproduce(a, b, j); // randomly two parents chosen; will be proportional to proportion
}
merge_sort(Pop[0], N);
// calculate distance to oscillating points and write to file
dst1 = dist_n(P2); // distance to 1st oscillating point
dst2 = dist_n(P3); // distance to 2nd oscillating point
d1[i] = dst1;
d2[i] = dst2;
// set new generation as parent generation for next generation
tmp_ptr = Pop[0];
Pop[0] = Pop[1];
Pop[1] = tmp_ptr;
}
}
}
deinit();
cleanup();
sprintf(fname, "b%lug%lun%lu_osc.dat", L, G, N);
if(!(fp = fopen(fname, "w"))){
printf("%s could not be opened!! Error!!\n", fname);
exit(2);
}
// write distances to file
for(n = 0; n < G; n++){
fprintf(fp, "%d ", n);
fprintf(fp, "%" PREC "lf %" PREC "lf\n", d1[n], d2[n]);
}
fclose(fp);
free(d1); free(d2);
FILE *gp = popen ("gnuplot -persistent", "w"); // open gnuplot in persistent mode
plot(gp, 0, fname, 3, "oscillation", "G", "d", 0, "" );
fflush(gp);
pclose(gp);
return 0;
}