int ex_put_init (int exoid,
const char *title,
int num_dim,
int num_nodes,
int num_elem,
int num_elem_blk,
int num_node_sets,
int num_side_sets)
{
ex_init_params par;
strcpy( par.title, title );
par.num_dim = num_dim;
par.num_nodes = num_nodes;
par.num_edge = 0;
par.num_edge_blk = 0;
par.num_face = 0;
par.num_face_blk = 0;
par.num_elem = num_elem;
par.num_elem_blk = num_elem_blk;
par.num_node_sets = num_node_sets;
par.num_edge_sets = 0;
par.num_face_sets = 0;
par.num_side_sets = num_side_sets;
par.num_elem_sets = 0;
par.num_node_maps = 0;
par.num_edge_maps = 0;
par.num_face_maps = 0;
par.num_elem_maps = 0;
return (ex_put_init_ext( exoid, &par ));
}
void write_to_exodus(int rank, int num_procs, char * out_file_name)
/*****************************************************************************/
{
int exo_access = EX_CLOBBER;
int cpu_word_size = sizeof(double);
int io_word_size = sizeof(float);
int out_id;
int i;
int b;
ex_init_params exinit;
int error = 0;
out_id = ex_create(out_file_name, exo_access, &cpu_word_size,
&io_word_size);
if (out_id < 0){
printf("error opening file");
}
strncpy( exinit.title, mss.title, MAX_LINE_LENGTH-1 );
exinit.title[MAX_LINE_LENGTH-1] = 0;
exinit.num_dim = mss.num_dim;
exinit.num_nodes = mss.num_nodes;
exinit.num_edge = 0;
exinit.num_edge_blk = 0;
exinit.num_face = 0;
exinit.num_face_blk = 0;
exinit.num_elem = mss.num_elem;
exinit.num_elem_blk = mss.num_elem_blk;
exinit.num_node_sets = mss.num_node_sets;
exinit.num_edge_sets = 0;
exinit.num_face_sets = 0;
exinit.num_side_sets = mss.num_side_sets;
exinit.num_elem_sets = 0;
exinit.num_node_maps = 0;
exinit.num_edge_maps = 0;
exinit.num_face_maps = 0;
exinit.num_elem_maps = 0;
PERROR;
if ( ex_put_init_ext(out_id, &exinit) < 0 )
++error;
PERROR;
/*now write parallel global information*/
if ( ne_put_init_global( out_id,
mss.num_nodes_global,
mss.num_elems_global,
mss.num_elm_blks_global,
mss.num_node_sets_global,
mss.num_side_sets_global ) < 0 )
++error;
PERROR;
if ( ne_put_init_info( out_id, mss.num_total_proc, mss.num_proc_in_file,
mss.type ) < 0 )
++error;
PERROR;
if ( ne_put_eb_info_global(out_id,mss.elem_blk_ids_global,mss.elem_blk_cnts_global) < 0 )
++error;
PERROR;
if ( mss.num_node_sets_global > 0 ) {
if ( ne_put_ns_param_global( out_id,
mss.ns_ids_global,
mss.ns_cnts_global,
mss.ns_df_cnts_global ) < 0 )
++error;
}
PERROR;
if ( mss.num_side_sets_global > 0 ) {
if ( ne_put_ss_param_global( out_id,
mss.ss_ids_global,
mss.ss_cnts_global,
mss.ss_df_cnts_global ) < 0 )
++error;
}
PERROR;
/*writingparallel info*/
if ( ne_put_loadbal_param( out_id,
mss.num_internal_nodes,
mss.num_border_nodes,
mss.num_external_nodes,
mss.num_internal_elems,
mss.num_border_elems,
mss.num_node_comm_maps,
mss.num_elem_comm_maps,
rank ) < 0 )
++error;
PERROR;
if ( ne_put_cmap_params( out_id,
mss.node_cmap_ids,
(int*)mss.node_cmap_node_cnts,
mss.elem_cmap_ids,
(int*)mss.elem_cmap_elem_cnts,
rank ) < 0 )
++error;
PERROR;
if ( ne_put_elem_map( out_id,
mss.internal_elements,
mss.border_elements,
rank ) < 0 )
++error;
PERROR;
if ( ne_put_node_map( out_id,
mss.internal_nodes,
mss.border_nodes,
mss.external_nodes,
rank ) < 0 )
++error;
PERROR;
for (i = 0; i < mss.num_node_comm_maps; i++) {
if ( ne_put_node_cmap( out_id,
mss.node_cmap_ids[i],
mss.comm_node_ids[i],
mss.comm_node_proc_ids[i],
rank ) < 0 )
++error;
}
PERROR;
for (i = 0; i < mss.num_elem_comm_maps; i++) {
if ( ne_put_elem_cmap( out_id,
mss.elem_cmap_ids[i],
mss.comm_elem_ids[i],
mss.comm_side_ids[i],
mss.comm_elem_proc_ids[i],
rank ) < 0 )
++error;
}
PERROR;
/*coords*/
error += ex_put_coord(out_id, mss.coord, (mss.coord)+mss.num_nodes, (mss.coord)+2*mss.num_nodes);
PERROR;
error += ex_put_coord_names(out_id, mss.bptr);
PERROR;
/*map*/
error += ex_put_map(out_id, mss.element_order_map);
PERROR;
error += ex_put_elem_num_map(out_id, mss.global_element_numbers);
PERROR;
error += ex_put_node_num_map(out_id, mss.global_node_numbers);
PERROR;
/*block info*/
for(b = 0; b < mss.num_elem_blk; b++)
{
int gpe = 0;
int fpe = 0;
error += ex_put_block( out_id,
EX_ELEM_BLOCK,
mss.block_id[b],
mss.element_types[b],
mss.elements[b],
mss.nodes_per_element[b],
gpe, fpe,
mss.element_attributes[b] ); /* num attr */
PERROR;
}
/* write element connectivity information */
for (b = 0; b < mss.num_elem_blk; b++) {
if ( mss.elements[b] > 0 ){
error += ex_put_elem_conn(out_id,mss.block_id[b],mss.elmt_node_linkage[b]);
PERROR;
}
}
/* write in nodal boundary sets for the body. */
for(i = 0; i < mss.num_node_sets; i++) {
error += ex_put_node_set_param(out_id, mss.node_set_id[i],
mss.num_nodes_in_node_set[i],
mss.num_df_in_node_set[i]);
PERROR;
if(mss.num_nodes_in_node_set[i])
error += ex_put_node_set(out_id, mss.node_set_id[i], mss.node_set_nodes[i]);
PERROR;
}
for(i = 0; i < mss.num_side_sets; i++) {
error += ex_put_side_set_param(out_id, mss.side_set_id[i],
mss.num_elements_in_side_set[i],
mss.num_df_in_side_set[i]);
PERROR;
if(mss.num_elements_in_side_set[i])
error += ex_put_side_set(out_id, mss.side_set_id[i],
mss.side_set_elements[i],
mss.side_set_faces[i]);
PERROR;
}
error += ex_put_qa(out_id, mss.num_qa_records, mss.qaRecord);
PERROR;
ex_close(out_id);
}
int main (int argc, char **argv)
{
int exoid, num_dim, num_nodes, num_elem, num_elem_blk;
int num_elem_in_block[10], num_total_nodes_per_blk[10];
int num_face_in_block[10], num_total_faces_per_blk[10];
int num_node_sets, error;
int i, j, *connect;
int bids, nnpe[20];
int num_qa_rec, num_info;
int CPU_word_size,IO_word_size;
float x[100], y[100], z[100];
char *coord_names[3], *qa_record[2][4], *info[3];
char *block_names[10];
char *title = "This is a test";
ex_opts (EX_VERBOSE | EX_ABORT );
/* Specify compute and i/o word size */
CPU_word_size = 0; /* sizeof(float) */
IO_word_size = 4; /* (4 bytes) */
/* create EXODUS II file */
exoid = ex_create ("test-nfaced.exo", /* filename path */
EX_CLOBBER, /* create mode */
&CPU_word_size, /* CPU float word size in bytes */
&IO_word_size); /* I/O float word size in bytes */
printf ("after ex_create for test.exo, exoid = %d\n", exoid);
printf (" cpu word size: %d io word size: %d\n",CPU_word_size,IO_word_size);
/* initialize file with parameters */
{
ex_init_params par;
num_dim = 3;
num_nodes = 14;
num_elem = 3;
num_elem_blk = 1;
num_node_sets = 0;
strcpy( par.title, title );
par.num_dim = num_dim;
par.num_nodes = num_nodes;
par.num_edge = 0;
par.num_edge_blk = 0;
par.num_face = 15;
par.num_face_blk = 1;
par.num_elem = num_elem;
par.num_elem_blk = num_elem_blk;
par.num_node_sets = num_node_sets;
par.num_edge_sets = 0;
par.num_face_sets = 0;
par.num_side_sets = 0;
par.num_elem_sets = 0;
par.num_node_maps = 0;
par.num_edge_maps = 0;
par.num_face_maps = 0;
par.num_elem_maps = 0;
error = ex_put_init_ext (exoid, &par);
printf ("after ex_put_init_ext, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
}
/* write nodal coordinates values and names to database */
x[ 0] = 0.00000e+00 ; y[ 0] = 0.00000e+00 ; z[ 0] = 0.00000e+00 ;
x[ 1] = 2.00000e+00 ; y[ 1] = 0.00000e+00 ; z[ 1] = 0.00000e+00 ;
x[ 2] = 0.00000e+00 ; y[ 2] = 2.00000e+00 ; z[ 2] = 0.00000e+00 ;
x[ 3] = 2.00000e+00 ; y[ 3] = 2.00000e+00 ; z[ 3] = 0.00000e+00 ;
x[ 4] = 0.00000e+00 ; y[ 4] = 0.00000e+00 ; z[ 4] = 2.00000e+00 ;
x[ 5] = 2.00000e+00 ; y[ 5] = 0.00000e+00 ; z[ 5] = 2.00000e+00 ;
x[ 6] = 0.00000e+00 ; y[ 6] = 2.00000e+00 ; z[ 6] = 2.00000e+00 ;
x[ 7] = 2.00000e+00 ; y[ 7] = 2.00000e+00 ; z[ 7] = 2.00000e+00 ;
x[ 8] = 0.00000e+00 ; y[ 8] = 3.50000e+00 ; z[ 8] = 1.00000e+00 ;
x[ 9] = 2.00000e+00 ; y[ 9] = 3.50000e+00 ; z[ 9] = 1.00000e+00 ;
x[10] = 0.00000e+00 ; y[10] = 3.00000e+00 ; z[10] = 1.50000e+00 ;
x[11] = 2.00000e+00 ; y[11] = 3.00000e+00 ; z[11] = 1.50000e+00 ;
x[12] = 0.00000e+00 ; y[12] = 3.00000e+00 ; z[12] = 0.50000e+00 ;
x[13] = 2.00000e+00 ; y[13] = 3.00000e+00 ; z[13] = 0.50000e+00 ;
error = ex_put_coord (exoid, x, y, z);
printf ("after ex_put_coord, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
coord_names[0] = "x";
coord_names[1] = "y";
coord_names[2] = "z";
error = ex_put_coord_names (exoid, coord_names);
printf ("after ex_put_coord_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* Write the face block parameters */
block_names[0] = "face_block_1";
num_face_in_block[0] = 15;
num_total_nodes_per_blk[0] = 58;
bids = 10;
error = ex_put_block (exoid, EX_FACE_BLOCK, bids, "nsided",
num_face_in_block[0],
num_total_nodes_per_blk[0],
0, 0, 0);
printf ("after ex_put_block, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* Write face block names */
error = ex_put_names(exoid, EX_FACE_BLOCK, block_names);
printf ("after ex_put_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write face connectivity */
connect = (int *) calloc(num_total_nodes_per_blk[0], sizeof(int));
i = 0;
j = 0;
connect[i++] = 5;
connect[i++] = 6;
connect[i++] = 8; /* connectivity of face 1 of element 1 */
nnpe[j++] = 3;
connect[i++] = 2;
connect[i++] = 1;
connect[i++] = 4; /* face 2 of element 1 */
nnpe[j++] = 3;
connect[i++] = 6;
connect[i++] = 2;
connect[i++] = 4;
connect[i++] = 8; /* face 3 of element 1 */
nnpe[j++] = 4;
connect[i++] = 8;
connect[i++] = 4;
connect[i++] = 1;
connect[i++] = 5; /* face 4 of element 1 */
nnpe[j++] = 4;
connect[i++] = 1;
connect[i++] = 2;
connect[i++] = 6;
connect[i++] = 5; /* face 5 of element 1 */
nnpe[j++] = 4;
connect[i++] = 5;
connect[i++] = 8;
connect[i++] = 7; /* connectivity of face 1 of element 2 */
nnpe[j++] = 3;
connect[i++] = 1;
connect[i++] = 3;
connect[i++] = 4; /* face 2 of element 2 */
nnpe[j++] = 3;
connect[i++] = 7;
connect[i++] = 8;
connect[i++] = 4;
connect[i++] = 3; /* face 3 of element 2 */
nnpe[j++] = 4;
connect[i++] = 7;
connect[i++] = 3;
connect[i++] = 1;
connect[i++] = 5; /* face 4 of element 2 */
nnpe[j++] = 4;
connect[i++] = 8;
connect[i++] = 4;
connect[i++] = 14;
connect[i++] = 10;
connect[i++] = 12; /* connectivity of face 1 of element 3 */
nnpe[j++] = 5;
connect[i++] = 7;
connect[i++] = 11;
connect[i++] = 9;
connect[i++] = 13;
connect[i++] = 3; /* face 2 of element 3 */
nnpe[j++] = 5;
connect[i++] = 7;
connect[i++] = 8;
connect[i++] = 12;
connect[i++] = 11; /* face 3 of element 3 */
nnpe[j++] = 4;
connect[i++] = 11;
connect[i++] = 12;
connect[i++] = 10;
connect[i++] = 9; /* face 4 of element 3 */
nnpe[j++] = 4;
connect[i++] = 9;
connect[i++] = 10;
connect[i++] = 14;
connect[i++] = 13; /* face 5 of element 3 */
nnpe[j++] = 4;
connect[i++] = 13;
connect[i++] = 14;
connect[i++] = 4;
connect[i++] = 3; /* face 6 of element 3 */
nnpe[j++] = 4;
assert(i == num_total_nodes_per_blk[0]);
assert(j == num_face_in_block[0]);
error = ex_put_conn (exoid, EX_FACE_BLOCK, bids, connect, NULL, NULL);
printf ("after ex_put_conn, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
free (connect);
connect = NULL;
error = ex_put_entity_count_per_polyhedra(exoid, EX_FACE_BLOCK, bids, nnpe);
printf ("after ex_put_entity_count_per_polyhedra, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write element block parameters */
block_names[0] = "nfaced_1";
num_elem_in_block[0] = 3;
num_total_faces_per_blk[0] = 5 + 5 + 7;
bids = 10;
error = ex_put_block (exoid, EX_ELEM_BLOCK, bids, "nfaced",
num_elem_in_block[0],
0,
0,
num_total_faces_per_blk[0],
0);
printf ("after ex_put_block, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* Write element block names */
error = ex_put_names(exoid, EX_ELEM_BLOCK, block_names);
printf ("after ex_put_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write element-face connectivity */
connect = (int *) calloc(num_total_faces_per_blk[0], sizeof(int));
i = 0;
j = 0;
connect[i++] = 1;
connect[i++] = 2;
connect[i++] = 3;
connect[i++] = 4;
connect[i++] = 5;
nnpe[j++] = 5; /* Number of faces per element 1 */
connect[i++] = 4;
connect[i++] = 6;
connect[i++] = 7;
connect[i++] = 8;
connect[i++] = 9;
nnpe[j++] = 5; /* Number of faces per element 2 */
connect[i++] = 8;
connect[i++] = 10;
connect[i++] = 11;
connect[i++] = 12;
connect[i++] = 13;
connect[i++] = 14;
connect[i++] = 15;
nnpe[j++] = 7; /* Number of faces per element 3 */
assert(i == num_total_faces_per_blk[0]);
assert(j == num_elem_in_block[0]);
error = ex_put_conn (exoid, EX_ELEM_BLOCK, bids, NULL, NULL, connect);
printf ("after ex_put_conn, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
free (connect);
error = ex_put_entity_count_per_polyhedra(exoid, EX_ELEM_BLOCK, bids, nnpe);
printf ("after ex_put_entity_count_per_polyhedra, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write QA records; test empty and just blank-filled records */
num_qa_rec = 2;
qa_record[0][0] = "TESTWT-NFACED";
qa_record[0][1] = "testwt-nfaced";
qa_record[0][2] = "2010/02/15";
qa_record[0][3] = "06:35:15";
qa_record[1][0] = "";
qa_record[1][1] = " ";
qa_record[1][2] = "";
qa_record[1][3] = " ";
error = ex_put_qa (exoid, num_qa_rec, qa_record);
printf ("after ex_put_qa, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write information records; test empty and just blank-filled records */
num_info = 3;
info[0] = "This is the first information record.";
info[1] = "";
info[2] = " ";
error = ex_put_info (exoid, num_info, info);
printf ("after ex_put_info, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* close the EXODUS files
*/
error = ex_close (exoid);
printf ("after ex_close, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
return 0;
}
int main (int argc, char **argv)
{
int exoid, num_dim, num_nodes, num_elem, num_elem_blk;
int num_elem_in_block[10], num_total_nodes_per_blk[10];
int num_face_in_block[10], num_total_faces_per_blk[10];
int num_face_in_sset[10], num_nodes_in_nset[10];
int num_node_sets, num_side_sets, error;
int i, j, k, m, *elem_map, *connect;
int node_list[100],elem_list[100],side_list[100];
int bids[10], ssids[10], nsids[10], nnpe[10];
int num_qa_rec, num_info;
int num_glo_vars, num_nod_vars, num_ele_vars, num_sset_vars, num_nset_vars;
int *truth_tab;
int whole_time_step, num_time_steps;
int CPU_word_size,IO_word_size;
int prop_array[2];
float *glob_var_vals, *nodal_var_vals, *elem_var_vals;
float *sset_var_vals, *nset_var_vals;
float time_value;
float x[100], y[100], z[100];
float dist_fact[100];
char *coord_names[3], *qa_record[2][4], *info[3], *var_names[3];
char *block_names[10], *nset_names[10], *sset_names[10];
char *prop_names[2], *attrib_names[2];
char *title = "This is a test";
ex_opts (EX_VERBOSE | EX_ABORT );
/* Specify compute and i/o word size */
CPU_word_size = 0; /* sizeof(float) */
IO_word_size = 4; /* (4 bytes) */
/* create EXODUS II file */
exoid = ex_create ("test-nfaced.exo", /* filename path */
EX_CLOBBER, /* create mode */
&CPU_word_size, /* CPU float word size in bytes */
&IO_word_size); /* I/O float word size in bytes */
printf ("after ex_create for test.exo, exoid = %d\n", exoid);
printf (" cpu word size: %d io word size: %d\n",CPU_word_size,IO_word_size);
/* ncopts = NC_VERBOSE; */
/* initialize file with parameters */
{
ex_init_params par;
num_dim = 3;
num_nodes = 14;
num_elem = 1;
num_elem_blk = 1;
num_node_sets = 0;
strcpy( par.title, title );
par.num_dim = num_dim;
par.num_nodes = num_nodes;
par.num_edge = 0;
par.num_edge_blk = 0;
par.num_face = 5;
par.num_face_blk = 1;
par.num_elem = num_elem;
par.num_elem_blk = num_elem_blk;
par.num_node_sets = num_node_sets;
par.num_edge_sets = 0;
par.num_face_sets = 0;
par.num_side_sets = 0;
par.num_elem_sets = 0;
par.num_node_maps = 0;
par.num_edge_maps = 0;
par.num_face_maps = 0;
par.num_elem_maps = 0;
error = ex_put_init_ext (exoid, &par);
printf ("after ex_put_init_ext, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
}
/* write nodal coordinates values and names to database */
x[ 0] = 0.00000e+00 ; y[ 0] = 0.00000e+00 ; z[ 0] = 0.00000e+00 ;
x[ 1] = 2.00000e+00 ; y[ 1] = 0.00000e+00 ; z[ 1] = 0.00000e+00 ;
x[ 2] = 0.00000e+00 ; y[ 2] = 2.00000e+00 ; z[ 2] = 0.00000e+00 ;
x[ 3] = 2.00000e+00 ; y[ 3] = 2.00000e+00 ; z[ 3] = 0.00000e+00 ;
x[ 4] = 0.00000e+00 ; y[ 4] = 0.00000e+00 ; z[ 4] = 2.00000e+00 ;
x[ 5] = 2.00000e+00 ; y[ 5] = 0.00000e+00 ; z[ 5] = 2.00000e+00 ;
x[ 6] = 0.00000e+00 ; y[ 6] = 2.00000e+00 ; z[ 6] = 2.00000e+00 ;
x[ 7] = 2.00000e+00 ; y[ 7] = 2.00000e+00 ; z[ 7] = 2.00000e+00 ;
x[ 8] = 0.00000e+00 ; y[ 8] = 3.50000e+00 ; z[ 8] = 1.00000e+00 ;
x[ 9] = 2.00000e+00 ; y[ 9] = 3.50000e+00 ; z[ 9] = 1.00000e+00 ;
x[10] = 0.00000e+00 ; y[10] = 3.00000e+00 ; z[10] = 1.50000e+00 ;
x[11] = 2.00000e+00 ; y[11] = 3.00000e+00 ; z[11] = 1.50000e+00 ;
x[12] = 0.00000e+00 ; y[12] = 3.00000e+00 ; z[12] = 0.50000e+00 ;
x[13] = 2.00000e+00 ; y[13] = 3.00000e+00 ; z[13] = 0.50000e+00 ;
error = ex_put_coord (exoid, x, y, z);
printf ("after ex_put_coord, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
coord_names[0] = "x";
coord_names[1] = "y";
coord_names[2] = "z";
error = ex_put_coord_names (exoid, coord_names);
printf ("after ex_put_coord_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* Write the face block parameters */
block_names[0] = "face_block_1";
num_face_in_block[0] = 15;
num_total_nodes_per_blk[0] = 54;
bids[0] = 10;
error = ex_put_block (exoid, EX_FACE_BLOCK, bids[0], "nsided",
num_face_in_block[0],
num_total_nodes_per_blk[0],
0, 0, 0);
printf ("after ex_put_block, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write face connectivity */
connect = (int *) calloc(num_total_nodes_per_blk[0], sizeof(int));
i = 0;
j = 0;
connect[i++] = 5;
connect[i++] = 6;
connect[i++] = 8; /* connectivity of face 1 of element 1 */
connect[i++] = 2;
connect[i++] = 1;
connect[i++] = 4; /* face 2 of element 1 */
connect[i++] = 6;
connect[i++] = 2;
connect[i++] = 4;
connect[i++] = 8; /* face 3 of element 1 */
connect[i++] = 8;
connect[i++] = 4;
connect[i++] = 1;
connect[i++] = 5; /* face 4 of element 1 */
connect[i++] = 1;
connect[i++] = 2;
connect[i++] = 6;
connect[i++] = 5; /* face 5 of element 1 */
connect[i++] = 5;
connect[i++] = 8;
connect[i++] = 7; /* connectivity of face 1 of element 2 */
connect[i++] = 1; connect[i++] = 2; connect[i++] = 3; connect[i++] = 4;
nnpe[j++] = 4;
connect[i++] = 5; connect[i++] = 3; connect[i++] = 4; connect[i++] = 6;
nnpe[j++] = 4;
connect[i++] = 5; connect[i++] = 1; connect[i++] = 2; connect[i++] = 6;
nnpe[j++] = 4;
connect[i++] = 6; connect[i++] = 2; connect[i++] = 4;
nnpe[j++] = 3;
connect[i++] = 5; connect[i++] = 3; connect[i++] = 1;
nnpe[j++] = 3;
assert(i == num_total_nodes_per_blk[0]);
assert(j == num_face_in_block[0]);
error = ex_put_conn (exoid, EX_FACE_BLOCK, bids[0], connect, NULL, NULL);
printf ("after ex_put_conn, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
free (connect);
connect = NULL;
error = ex_put_entity_count_per_polyhedra(exoid, EX_FACE_BLOCK, bids[0], nnpe);
printf ("after ex_put_entity_count_per_polyhedra, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write element block parameters */
block_names[0] = "nfaced_1";
num_elem_in_block[0] = 1;
num_total_nodes_per_blk[0] = 6; /* Do we need this; does it make sense... */
num_total_faces_per_blk[0] = 5;
bids[0] = 10;
error = ex_put_block (exoid, EX_ELEM_BLOCK, bids[0], "nfaced",
num_elem_in_block[0],
0,
0,
num_total_faces_per_blk[0],
0);
printf ("after ex_put_block, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* Write face block names */
error = ex_put_names(exoid, EX_FACE_BLOCK, block_names);
printf ("after ex_put_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* Write element block names */
error = ex_put_names(exoid, EX_ELEM_BLOCK, block_names);
printf ("after ex_put_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write element-face connectivity */
connect = (int *) calloc(num_total_faces_per_blk[0], sizeof(int));
i = 0;
j = 0;
connect[i++] = 1; connect[i++] = 2; connect[i++] = 3; connect[i++] = 4;
connect[i++] = 5;
nnpe[j++] = 5; /* Number of faces per element */
assert(i == num_total_faces_per_blk[0]);
assert(j == num_elem_in_block[0]);
error = ex_put_conn (exoid, EX_ELEM_BLOCK, bids[0], NULL, NULL, connect);
printf ("after ex_put_conn, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
free (connect);
error = ex_put_entity_count_per_polyhedra(exoid, EX_ELEM_BLOCK, bids[0], nnpe);
printf ("after ex_put_entity_count_per_polyhedra, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write QA records; test empty and just blank-filled records */
num_qa_rec = 2;
qa_record[0][0] = "TESTWT-NFACED";
qa_record[0][1] = "testwt-nfaced";
qa_record[0][2] = "2010/02/15";
qa_record[0][3] = "06:35:15";
qa_record[1][0] = "";
qa_record[1][1] = " ";
qa_record[1][2] = "";
qa_record[1][3] = " ";
error = ex_put_qa (exoid, num_qa_rec, qa_record);
printf ("after ex_put_qa, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write information records; test empty and just blank-filled records */
num_info = 3;
info[0] = "This is the first information record.";
info[1] = "";
info[2] = " ";
error = ex_put_info (exoid, num_info, info);
printf ("after ex_put_info, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write results variables parameters and names */
num_glo_vars = 1;
var_names[0] = "glo_vars";
error = ex_put_var_param (exoid, "g", num_glo_vars);
printf ("after ex_put_var_param, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
error = ex_put_var_names (exoid, "g", num_glo_vars, var_names);
printf ("after ex_put_var_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
num_nod_vars = 2;
/* 12345678901234567890123456789012 */
var_names[0] = "node_variable_a_very_long_name_0";
var_names[1] = "n";
error = ex_put_var_param (exoid, "n", num_nod_vars);
printf ("after ex_put_var_param, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
error = ex_put_var_names (exoid, "n", num_nod_vars, var_names);
printf ("after ex_put_var_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
num_ele_vars = 3;
var_names[0] = "ele_var0";
var_names[1] = "ele_var1";
var_names[2] = "ele_var2";
error = ex_put_var_param (exoid, "e", num_ele_vars);
printf ("after ex_put_var_param, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
error = ex_put_var_names (exoid, "e", num_ele_vars, var_names);
printf ("after ex_put_var_names, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write element variable truth table */
truth_tab = (int *) calloc ((num_elem_blk*num_ele_vars), sizeof(int));
k = 0;
for (i=0; i<num_elem_blk; i++)
{
for (j=0; j<num_ele_vars; j++)
{
truth_tab[k++] = 1;
}
}
error = ex_put_elem_var_tab (exoid, num_elem_blk, num_ele_vars, truth_tab);
printf ("after ex_put_elem_var_tab, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
free (truth_tab);
/* for each time step, write the analysis results;
* the code below fills the arrays glob_var_vals,
* nodal_var_vals, and elem_var_vals with values for debugging purposes;
* obviously the analysis code will populate these arrays
*/
whole_time_step = 1;
num_time_steps = 10;
glob_var_vals = (float *) calloc (num_glo_vars, CPU_word_size);
nodal_var_vals = (float *) calloc (num_nodes, CPU_word_size);
elem_var_vals = (float *) calloc (8, CPU_word_size);
for (i=0; i<num_time_steps; i++)
{
time_value = (float)(i+1)/100.;
/* write time value */
error = ex_put_time (exoid, whole_time_step, &time_value);
printf ("after ex_put_time, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write global variables */
for (j=0; j<num_glo_vars; j++)
{
glob_var_vals[j] = (float)(j+2) * time_value;
}
error = ex_put_glob_vars (exoid, whole_time_step, num_glo_vars,
glob_var_vals);
printf ("after ex_put_glob_vars, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
/* write nodal variables */
for (k=1; k<=num_nod_vars; k++)
{
for (j=0; j<num_nodes; j++)
{
nodal_var_vals[j] = (float)k + ((float)(j+1) * time_value);
}
error = ex_put_nodal_var (exoid, whole_time_step, k, num_nodes,
nodal_var_vals);
printf ("after ex_put_nodal_var, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
}
/* write element variables */
for (k=1; k<=num_ele_vars; k++)
{
for (j=0; j<num_elem_blk; j++)
{
for (m=0; m<num_elem_in_block[j]; m++)
{
elem_var_vals[m] = (float)(k+1) + (float)(j+2) +
((float)(m+1)*time_value);
/* printf("elem_var_vals[%d]: %f\n",m,elem_var_vals[m]); */
}
error = ex_put_elem_var (exoid, whole_time_step, k, bids[j],
num_elem_in_block[j], elem_var_vals);
printf ("after ex_put_elem_var, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
}
}
whole_time_step++;
/* update the data file; this should be done at the end of every time step
* to ensure that no data is lost if the analysis dies
*/
error = ex_update (exoid);
printf ("after ex_update, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
}
free(glob_var_vals);
free(nodal_var_vals);
free(elem_var_vals);
/* close the EXODUS files
*/
error = ex_close (exoid);
printf ("after ex_close, error = %d\n", error);
if (error) {
ex_close (exoid);
exit(-1);
}
return 0;
}
int cCreateEdgeFace( int argc, char* argv[] )
{
int exoid;
int appWordSize = 8;
int diskWordSize = 8;
/* int concatBlocks = ex_have_arg( argc, argv, "-pcab" ); */
int concatSets = ex_have_arg( argc, argv, "-pcset" );
int concatResult = ex_have_arg( argc, argv, "-pvpax" );
double t;
ex_init_params modelParams = {
"CreateEdgeFace Test", /* title */
3, /* num_dim */
12, /* num_nodes */
20, /* num_edge */
1, /* num_edge_blk */
11, /* num_face */
3, /* num_face_blk */
3, /* num_elem */
2, /* num_elem_blk */
1, /* num_node_sets */
1, /* num_edge_sets */
1, /* num_face_sets */
1, /* num_side_sets */
2, /* num_elem_sets */
1, /* num_node_map */
1, /* num_edge_map */
1, /* num_face_map */
1, /* num_elem_map */
};
ex_block edgeBlocks[1];
ex_block faceBlocks[3];
ex_block elemBlocks[2];
ex_var_params varParams;
ex_opts (EX_VERBOSE | EX_ABORT );
edgeBlocks[0].type = EX_EDGE_BLOCK;
edgeBlocks[0].id = 100;
edgeBlocks[0].num_entry = 20;
edgeBlocks[0].num_nodes_per_entry = 2;
edgeBlocks[0].num_attribute = 1;
strcpy(edgeBlocks[0].topology, "EDGE2");
faceBlocks[0].type = EX_FACE_BLOCK;
faceBlocks[0].id = 500;
faceBlocks[0].num_entry = 2;
faceBlocks[0].num_nodes_per_entry = 4;
faceBlocks[0].num_attribute = 1;
strcpy(faceBlocks[0].topology, "QUAD4");
faceBlocks[1].type = EX_FACE_BLOCK;
faceBlocks[1].id = 600;
faceBlocks[1].num_entry = 1;
faceBlocks[1].num_nodes_per_entry = 4;
faceBlocks[1].num_attribute = 1;
strcpy(faceBlocks[1].topology, "QUAD4");
faceBlocks[2].type = EX_FACE_BLOCK;
faceBlocks[2].id = 700;
faceBlocks[2].num_entry = 8;
faceBlocks[2].num_nodes_per_entry = 4;
faceBlocks[2].num_attribute = 1;
strcpy(faceBlocks[2].topology, "QUAD4");
elemBlocks[0].type = EX_ELEM_BLOCK;
elemBlocks[0].id = 200;
elemBlocks[0].num_entry = 2;
elemBlocks[0].num_nodes_per_entry = 8;
elemBlocks[0].num_edges_per_entry = 12;
elemBlocks[0].num_faces_per_entry = 6;
elemBlocks[0].num_attribute = 2;
strcpy(elemBlocks[0].topology, "HEX8");
elemBlocks[1].type = EX_ELEM_BLOCK;
elemBlocks[1].id = 201;
elemBlocks[1].num_entry = 1;
elemBlocks[1].num_nodes_per_entry = 4;
elemBlocks[1].num_edges_per_entry = 0;
elemBlocks[1].num_faces_per_entry = 0;
elemBlocks[1].num_attribute = 0;
strcpy(elemBlocks[1].topology, "TET4");
varParams.edge_var_tab = (int*)malloc(2 * sizeof(int));
varParams.face_var_tab = (int*)malloc(3 * sizeof(int));
varParams.elem_var_tab = (int*)malloc(2 * sizeof(int));
varParams.nset_var_tab = (int*)0;
varParams.eset_var_tab = (int*)0;
varParams.fset_var_tab = (int*)malloc(1 * sizeof(int));
varParams.sset_var_tab = (int*)0;
varParams.elset_var_tab = (int*)0;
varParams.num_glob = 2;
varParams.num_node = 1;
varParams.num_edge = 2;
varParams.edge_var_tab[0] = 1;
varParams.edge_var_tab[1] = 1;
varParams.num_face = 1;
varParams.face_var_tab[0] = 1;
varParams.face_var_tab[1] = 1;
varParams.face_var_tab[2] = 1;
varParams.num_elem = 1;
varParams.elem_var_tab[0] = 1;
varParams.elem_var_tab[1] = 0;
varParams.num_nset = 0;
varParams.num_eset = 0;;
varParams.num_fset = 1;
varParams.fset_var_tab[0] = 1;
varParams.num_sset = 0;
varParams.num_elset = 0;
exoid = ex_create( EX_TEST_FILENAME, EX_CLOBBER, &appWordSize, &diskWordSize );
if ( exoid <= 0 )
{
fprintf( stderr, "Unable to open \"%s\" for writing.\n", EX_TEST_FILENAME );
return 1;
}
EXCHECK( ex_put_init_ext( exoid, &modelParams ),
"Unable to initialize database.\n" );
{
int blk;
for ( blk = 0; blk < modelParams.num_edge_blk; ++blk ) {
EXCHECK( ex_put_block_param( exoid, edgeBlocks[blk]), "Unable to write edge block" );
}
for ( blk = 0; blk < modelParams.num_face_blk; ++blk ) {
EXCHECK( ex_put_block_param( exoid, faceBlocks[blk]), "Unable to write face block" );
}
for ( blk = 0; blk < modelParams.num_elem_blk; ++blk ) {
EXCHECK( ex_put_block_param( exoid, elemBlocks[blk]), "Unable to write elem block" );
}
}
EXCHECK( ex_put_coord( exoid, (void*)coordsX, (void*)coordsY, (void*)coordsZ ),
"Unable to write coordinates.\n" );
EXCHECK( ex_put_coord_names( exoid, (char**)coordsNames ),
"Unable to write coordinate names.\n" );
/* =============== Connectivity ================== */
/* *** NEW API *** */
EXCHECK( ex_put_conn( exoid, EX_EDGE_BLOCK, edgeBlocks[0].id, ebconn1, 0, 0 ),
"Unable to write edge block connectivity.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_conn( exoid, EX_FACE_BLOCK, faceBlocks[0].id, fbconn1, 0, 0 ),
"Unable to write face block 1 connectivity.\n" );
EXCHECK( ex_put_conn( exoid, EX_FACE_BLOCK, faceBlocks[1].id, fbconn2, 0, 0 ),
"Unable to write face block 2 connectivity.\n" );
EXCHECK( ex_put_conn( exoid, EX_FACE_BLOCK, faceBlocks[2].id, fbconn3, 0, 0 ),
"Unable to write face block 3 connectivity.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_conn( exoid, EX_ELEM_BLOCK, elemBlocks[0].id, conn1, econn1, fconn1 ),
"Unable to write elem block 1 connectivity.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_conn( exoid, EX_ELEM_BLOCK, elemBlocks[1].id, conn2, 0, 0 ),
"Unable to write elem block 2 connectivity.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_names( exoid, EX_EDGE_BLOCK, (char**)edblk_names ), "Unable to write edge block names.\n" );
EXCHECK( ex_put_names( exoid, EX_FACE_BLOCK, (char**)fablk_names ), "Unable to write face block names.\n" );
EXCHECK( ex_put_names( exoid, EX_ELEM_BLOCK, (char**) eblk_names ), "Unable to write element block names.\n" );
/* =============== Number Maps ================== */
/* *** NEW API *** */
EXCHECK( ex_put_num_map( exoid, EX_NODE_MAP, 300, nmap1 ), "Unable to write node map.\n" );
EXCHECK( ex_put_num_map( exoid, EX_EDGE_MAP, 800, edmap1 ), "Unable to write edge map.\n" );
EXCHECK( ex_put_num_map( exoid, EX_FACE_MAP, 900, famap1 ), "Unable to write face map.\n" );
EXCHECK( ex_put_num_map( exoid, EX_ELEM_MAP, 400, emap1 ), "Unable to write element map.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_names( exoid, EX_NODE_MAP, (char**) nmap_names ), "Unable to write node map names.\n" );
EXCHECK( ex_put_names( exoid, EX_EDGE_MAP, (char**)edmap_names ), "Unable to write edge map names.\n" );
EXCHECK( ex_put_names( exoid, EX_FACE_MAP, (char**)famap_names ), "Unable to write face map names.\n" );
EXCHECK( ex_put_names( exoid, EX_ELEM_MAP, (char**) emap_names ), "Unable to write element map names.\n" );
/* =============== Attribute names ================ */
/* *** NEW API *** */
EXCHECK( ex_put_attr_names( exoid, EX_EDGE_BLOCK, edgeBlocks[0].id, (char**)edge_attr_names1 ),
"Unable to write edge block 1 attribute names.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_attr_names( exoid, EX_FACE_BLOCK, faceBlocks[0].id, (char**)face_attr_names1 ),
"Unable to write face block 1 attribute names.\n" );
EXCHECK( ex_put_attr_names( exoid, EX_FACE_BLOCK, faceBlocks[1].id, (char**)face_attr_names2 ),
"Unable to write face block 1 attribute names.\n" );
EXCHECK( ex_put_attr_names( exoid, EX_FACE_BLOCK, faceBlocks[2].id, (char**)face_attr_names3 ),
"Unable to write face block 1 attribute names.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_attr_names( exoid, EX_ELEM_BLOCK, elemBlocks[0].id, (char**)elem_attr_names1 ),
"Unable to write elem block 1 attribute names.\n" );
/* =============== Attribute values =============== */
/* *** NEW API *** */
EXCHECK( ex_put_attr( exoid, EX_EDGE_BLOCK, edgeBlocks[0].id, edge_attr_values1 ),
"Unable to write edge block 1 attribute values.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_attr( exoid, EX_FACE_BLOCK, faceBlocks[0].id, face_attr_values1 ),
"Unable to write face block 1 attribute values.\n" );
EXCHECK( ex_put_attr( exoid, EX_FACE_BLOCK, faceBlocks[1].id, face_attr_values2 ),
"Unable to write face block 1 attribute values.\n" );
EXCHECK( ex_put_attr( exoid, EX_FACE_BLOCK, faceBlocks[2].id, face_attr_values3 ),
"Unable to write face block 1 attribute values.\n" );
/* *** NEW API *** */
EXCHECK( ex_put_attr( exoid, EX_ELEM_BLOCK, elemBlocks[0].id, elem_attr_values1 ),
"Unable to write elem block 1 attribute values.\n" );
/* =============== Set parameters ================= */
/* *** NEW API *** */
EXCHECK( ex_put_names( exoid, EX_NODE_SET, (char**)nset_names ), "Unable to write node set names.\n" );
EXCHECK( ex_put_names( exoid, EX_EDGE_SET, (char**)eset_names ), "Unable to write edge set names.\n" );
EXCHECK( ex_put_names( exoid, EX_FACE_SET, (char**)fset_names ), "Unable to write face set names.\n" );
EXCHECK( ex_put_names( exoid, EX_SIDE_SET, (char**)sset_names ), "Unable to write side set names.\n" );
EXCHECK( ex_put_names( exoid, EX_ELEM_SET, (char**)elset_names ), "Unable to write element set names.\n" );
{
ex_set allSets[1+1+1+1+2];
ex_set *nodeSets = &allSets[0];
ex_set *edgeSets = &allSets[1];
ex_set *faceSets = &allSets[2];
ex_set *sideSets = &allSets[3];
ex_set *elemSets = &allSets[4];
nodeSets[0].type = EX_NODE_SET;
nodeSets[0].id = 1000;
nodeSets[0].num_entry = 3;
nodeSets[0].num_distribution_factor = 0;
nodeSets[0].entry_list = nset_nodes;
nodeSets[0].extra_list = NULL;
nodeSets[0].distribution_factor_list = NULL;
edgeSets[0].type = EX_EDGE_SET;
edgeSets[0].id = 1200;
edgeSets[0].num_entry = 6;
edgeSets[0].num_distribution_factor = 6;
edgeSets[0].entry_list = eset_edges;
edgeSets[0].extra_list = eset_orient;
edgeSets[0].distribution_factor_list = eset_df;
faceSets[0].type = EX_FACE_SET;
faceSets[0].id = 1400;
faceSets[0].num_entry = 2;
faceSets[0].num_distribution_factor = 0;
faceSets[0].entry_list = fset_faces;
faceSets[0].extra_list = fset_orient;
faceSets[0].distribution_factor_list = NULL;
sideSets[0].type = EX_SIDE_SET;
sideSets[0].id = 1400;
sideSets[0].num_entry = 5;
sideSets[0].num_distribution_factor = 0;
sideSets[0].entry_list = sset_elems;
sideSets[0].extra_list = sset_sides;
sideSets[0].distribution_factor_list = NULL;
elemSets[0].type = EX_ELEM_SET;
elemSets[0].id = 1800;
elemSets[0].num_entry = 1;
elemSets[0].num_distribution_factor = 0;
elemSets[0].entry_list = &elset_elems[0];
elemSets[0].extra_list = NULL;
elemSets[0].distribution_factor_list = NULL;
elemSets[1].type = EX_ELEM_SET;
elemSets[1].id = 1900;
elemSets[1].num_entry = 1;
elemSets[1].num_distribution_factor = 0;
elemSets[1].entry_list = &elset_elems[1];
elemSets[1].extra_list = NULL;
elemSets[1].distribution_factor_list = NULL;
if ( concatSets ) {
EXCHECK( ex_put_sets(exoid, 1+2+1+1+1, allSets), "Unable to output concatenated sets.\n" );
} else {
EXCHECK( ex_put_sets( exoid, 1, nodeSets), "Unable to write node sets.\n" );
EXCHECK( ex_put_sets( exoid, 1, edgeSets), "Unable to write edge sets.\n" );
EXCHECK( ex_put_sets( exoid, 1, faceSets), "Unable to write face sets.\n" );
EXCHECK( ex_put_sets( exoid, 1, sideSets), "Unable to write side sets.\n" );
EXCHECK( ex_put_sets( exoid, 2, elemSets), "Unable to write element sets.\n" );
}
}
/* =============== Result variable params ========= */
/* *** NEW API *** */
if ( concatResult ) {
EXCHECK( ex_put_all_var_param_ext( exoid, &varParams ),
"Unable to write result variable parameter information.\n" );
} else {
EXCHECK( ex_put_var_param( exoid, "G", 2 ),
"Unable to write global result variable parameters.\n" );
EXCHECK( ex_put_var_param( exoid, "N", 1 ),
"Unable to write nodal result variable parameters.\n" );
EXCHECK( ex_put_var_param( exoid, "E", 1 ),
"Unable to write element result variable parameters.\n" );
EXCHECK( ex_put_var_param( exoid, "L", 2 ),
"Unable to write edge result variable parameters.\n" );
EXCHECK( ex_put_var_param( exoid, "F", 1 ),
"Unable to write face result variable parameters.\n" );
EXCHECK( ex_put_var_param( exoid, "A", 1 ),
"Unable to write faceset result variable parameters.\n" );
}
/* =============== Result variable names ========== */
/* *** NEW API *** */
EXCHECK( ex_put_var_name( exoid, "G", 1, "CALIBER" ), "Unable to write variable name.\n" );
EXCHECK( ex_put_var_name( exoid, "g", 2, "GUNPOWDER" ), "Unable to write variable name.\n" );
EXCHECK( ex_put_var_name( exoid, "N", 1, "RHO" ), "Unable to write variable name.\n" );
EXCHECK( ex_put_var_name( exoid, "l", 1, "GAMMA1" ), "Unable to write variable name.\n" );
EXCHECK( ex_put_var_name( exoid, "L", 2, "GAMMA2" ), "Unable to write variable name.\n" );
EXCHECK( ex_put_var_name( exoid, "f", 1, "PHI" ), "Unable to write variable name.\n" );
EXCHECK( ex_put_var_name( exoid, "E", 1, "EPSTRN" ), "Unable to write variable name.\n" );
EXCHECK( ex_put_var_name( exoid, "A", 1, "PHI0" ), "Unable to write variable name.\n" );
/* =============== Result variable values ========= */
t = 1.;
/* *** NEW API *** */
EXCHECK( ex_put_time( exoid, 1, &t ), "Unable to write time value.\n" );
EXCHECK( ex_put_var( exoid, 1, EX_GLOBAL, 1, 0/*N/A*/, 2, vals_glo_var[0] ), "Unable to write global var 1.\n" );
EXCHECK( ex_put_var( exoid, 1, EX_EDGE_BLOCK, 1, 100, 20, vals_edge_var1eb1[0] ), "Unable to write edge block 1 var 1.\n" );
EXCHECK( ex_put_var( exoid, 1, EX_EDGE_BLOCK, 2, 100, 20, vals_edge_var2eb1[0] ), "Unable to write edge block 1 var 2.\n" );
EXCHECK( ex_put_var( exoid, 1, EX_FACE_BLOCK, 1, 500, 2, vals_face_var1fb1[0] ), "Unable to write face block 1 var 1.\n" );
EXCHECK( ex_put_var( exoid, 1, EX_FACE_BLOCK, 1, 700, 8, vals_face_var1fb3[0] ), "Unable to write face block 3 var 1.\n" );
EXCHECK( ex_put_var( exoid, 1, EX_ELEM_BLOCK, 1, 200, 2, vals_elem_var1eb1[0] ), "Unable to write elem block 1 var 1.\n" );
EXCHECK( ex_put_var( exoid, 1, EX_FACE_SET, 1, 1400, 2, vals_fset_var1fs1[0] ), "Unable to write face set 1 var 1.\n" );
t = 2.;
EXCHECK( ex_put_time( exoid, 2, &t ), "Unable to write time value.\n" );
EXCHECK( ex_put_var( exoid, 2, EX_GLOBAL, 1, 0/*N/A*/, 2, vals_glo_var[1] ), "Unable to write global var 1.\n" );
EXCHECK( ex_put_var( exoid, 2, EX_EDGE_BLOCK, 1, 100, 20, vals_edge_var1eb1[1] ), "Unable to write edge block 1 var 1.\n" );
EXCHECK( ex_put_var( exoid, 2, EX_EDGE_BLOCK, 2, 100, 20, vals_edge_var2eb1[1] ), "Unable to write edge block 1 var 2.\n" );
EXCHECK( ex_put_var( exoid, 2, EX_FACE_BLOCK, 1, 500, 2, vals_face_var1fb1[1] ), "Unable to write face block 1 var 1.\n" );
EXCHECK( ex_put_var( exoid, 2, EX_FACE_BLOCK, 1, 700, 8, vals_face_var1fb3[1] ), "Unable to write face block 3 var 1.\n" );
EXCHECK( ex_put_var( exoid, 2, EX_ELEM_BLOCK, 1, 200, 2, vals_elem_var1eb1[1] ), "Unable to write elem block 1 var 1.\n" );
EXCHECK( ex_put_var( exoid, 2, EX_FACE_SET, 1, 1400, 2, vals_fset_var1fs1[1] ), "Unable to write face set 1 var 1.\n" );
EXCHECK( ex_put_nodal_var( exoid, 1, 1, 12, vals_nod_var[0] ), "Unable to write nodal var 1.\n" );
EXCHECK( ex_put_nodal_var( exoid, 2, 1, 12, vals_nod_var[1] ), "Unable to write nodal var 1.\n" );
EXCHECK( ex_close( exoid ),
"Unable to close database.\n" );
return 0;
}
void exodus_file_write_mesh(exodus_file_t* file,
fe_mesh_t* mesh)
{
ASSERT(file->writing);
// See whether we have polyhedral blocks, and whether the non-polyhedral
// blocks have supported element types.
int num_blocks = fe_mesh_num_blocks(mesh);
bool is_polyhedral = false;
int pos = 0;
char* block_name;
fe_block_t* block;
while (fe_mesh_next_block(mesh, &pos, &block_name, &block))
{
fe_mesh_element_t elem_type = fe_block_element_type(block);
if (elem_type == FE_POLYHEDRON)
{
is_polyhedral = true;
break;
}
else if (elem_type != FE_INVALID)
{
// Check the number of nodes for the element.
if (!element_is_supported(elem_type, fe_block_num_element_nodes(block, 0)))
polymec_error("exodus_file_write_mesh: Element type in block %s has invalid number of nodes.", block_name);
}
else
polymec_error("exodus_file_write_mesh: Invalid element type for block %s.", block_name);
}
// Write out information about elements, faces, edges, nodes.
file->num_nodes = fe_mesh_num_nodes(mesh);
ex_init_params params;
strcpy(params.title, file->title);
params.num_dim = 3;
params.num_nodes = file->num_nodes;
int num_edges = fe_mesh_num_edges(mesh);
params.num_edge = num_edges;
params.num_edge_blk = 0;
int num_faces = fe_mesh_num_faces(mesh);
params.num_face = num_faces;
params.num_face_blk = (is_polyhedral) ? 1 : 0;
int num_elem = fe_mesh_num_elements(mesh);
params.num_elem = num_elem;
params.num_elem_blk = num_blocks;
params.num_elem_sets = file->num_elem_sets = fe_mesh_num_element_sets(mesh);
params.num_face_sets = file->num_face_sets = fe_mesh_num_face_sets(mesh);
params.num_edge_sets = file->num_edge_sets = fe_mesh_num_edge_sets(mesh);
params.num_node_sets = file->num_node_sets = fe_mesh_num_node_sets(mesh);
params.num_side_sets = file->num_side_sets = fe_mesh_num_side_sets(mesh);
params.num_elem_maps = 0;
params.num_face_maps = 0;
params.num_edge_maps = 0;
params.num_node_maps = 0;
ex_put_init_ext(file->ex_id, ¶ms);
// If we have any polyhedral element blocks, we write out a single face
// block that incorporates all of the polyhedral elements.
if (is_polyhedral)
{
// Generate face->node connectivity information.
int num_pfaces = fe_mesh_num_faces(mesh);
int face_node_size = 0;
int num_face_nodes[num_pfaces];
for (int f = 0; f < num_pfaces; ++f)
{
int num_nodes = fe_mesh_num_face_nodes(mesh, f);
num_face_nodes[f] = num_nodes;
face_node_size += num_nodes;
}
int* face_nodes = polymec_malloc(sizeof(int) * face_node_size);
int offset = 0;
for (int f = 0; f < num_pfaces; ++f)
{
fe_mesh_get_face_nodes(mesh, f, &face_nodes[offset]);
offset += num_face_nodes[f];
}
for (int i = 0; i < face_node_size; ++i)
face_nodes[i] += 1;
// Write an "nsided" face block.
ex_put_block(file->ex_id, EX_FACE_BLOCK, 1, "nsided",
num_pfaces, face_node_size, 0, 0, 0);
ex_put_name(file->ex_id, EX_FACE_BLOCK, 1, "face_block");
ex_put_conn(file->ex_id, EX_FACE_BLOCK, 1, face_nodes, NULL, NULL);
// Clean up.
polymec_free(face_nodes);
// Number of nodes per face.
ex_put_entity_count_per_polyhedra(file->ex_id, EX_FACE_BLOCK,
1, num_face_nodes);
}
// Go over the element blocks and write out the data.
pos = 0;
while (fe_mesh_next_block(mesh, &pos, &block_name, &block))
{
int elem_block = pos;
int num_e = fe_block_num_elements(block);
fe_mesh_element_t elem_type = fe_block_element_type(block);
if (elem_type == FE_POLYHEDRON)
{
// Count up the faces in the block and write the block information.
int tot_num_elem_faces = 0;
int faces_per_elem[num_e];
for (int i = 0; i < num_e; ++i)
{
faces_per_elem[i] = fe_block_num_element_faces(block, i);
tot_num_elem_faces += faces_per_elem[i];
}
ex_put_block(file->ex_id, EX_ELEM_BLOCK, elem_block, "nfaced",
num_e, 0, 0, tot_num_elem_faces, 0);
// Write elem->face connectivity information.
int elem_faces[tot_num_elem_faces], offset = 0;
for (int i = 0; i < num_e; ++i)
{
fe_block_get_element_faces(block, i, &elem_faces[offset]);
offset += faces_per_elem[i];
}
for (int i = 0; i < tot_num_elem_faces; ++i)
elem_faces[i] += 1;
ex_put_conn(file->ex_id, EX_ELEM_BLOCK, elem_block, NULL, NULL, elem_faces);
ex_put_entity_count_per_polyhedra(file->ex_id, EX_ELEM_BLOCK, elem_block, faces_per_elem);
}
else if (elem_type != FE_INVALID)
{
// Get element information.
char elem_type_name[MAX_NAME_LENGTH+1];
get_elem_name(elem_type, elem_type_name);
int num_nodes_per_elem = fe_block_num_element_nodes(block, 0);
// Write the block.
ex_put_block(file->ex_id, EX_ELEM_BLOCK, elem_block, elem_type_name,
num_e, num_nodes_per_elem, 0, 0, 0);
// Write the elem->node connectivity.
int elem_nodes[num_e* num_nodes_per_elem], offset = 0;
for (int i = 0; i < num_e; ++i)
{
fe_block_get_element_nodes(block, i, &elem_nodes[offset]);
offset += num_nodes_per_elem;
}
for (int i = 0; i < num_e* num_nodes_per_elem; ++i)
elem_nodes[i] += 1;
ex_put_conn(file->ex_id, EX_ELEM_BLOCK, elem_block, elem_nodes, NULL, NULL);
}
// Set the element block name.
ex_put_name(file->ex_id, EX_ELEM_BLOCK, elem_block, block_name);
}
// Set node positions.
real_t x[file->num_nodes], y[file->num_nodes], z[file->num_nodes];
point_t* X = fe_mesh_node_positions(mesh);
for (int n = 0; n < file->num_nodes; ++n)
{
x[n] = X[n].x;
y[n] = X[n].y;
z[n] = X[n].z;
}
ex_put_coord(file->ex_id, x, y, z);
char* coord_names[3] = {"x", "y", "z"};
ex_put_coord_names(file->ex_id, coord_names);
// Write sets of entities.
int *set, set_id = 0;
size_t set_size;
char* set_name;
pos = set_id = 0;
while (fe_mesh_next_element_set(mesh, &pos, &set_name, &set, &set_size))
write_set(file, EX_ELEM_SET, ++set_id, set_name, set, set_size);
pos = set_id = 0;
while (fe_mesh_next_face_set(mesh, &pos, &set_name, &set, &set_size))
write_set(file, EX_FACE_SET, ++set_id, set_name, set, set_size);
pos = set_id = 0;
while (fe_mesh_next_edge_set(mesh, &pos, &set_name, &set, &set_size))
write_set(file, EX_EDGE_SET, ++set_id, set_name, set, set_size);
pos = set_id = 0;
while (fe_mesh_next_node_set(mesh, &pos, &set_name, &set, &set_size))
write_set(file, EX_NODE_SET, ++set_id, set_name, set, set_size);
pos = set_id = 0;
while (fe_mesh_next_side_set(mesh, &pos, &set_name, &set, &set_size))
write_set(file, EX_SIDE_SET, ++set_id, set_name, set, set_size);
}
void ExodusWriter::writeItem( xdm::RefPtr< xdm::Item > item, const xdm::FileSystemPath& path ) {
WritableExodusFile file( path );
std::size_t timeStep = 0;
ex_init_params meshParams;
std::strcpy( meshParams.title, item->name().substr( 0, MAX_LINE_LENGTH + 1 ).c_str() );
// First make up collections of pointers to everything that we know about. For now,
// that is just Blocks.
GatherExodusObjectsVisitor< EdgeBlock > edgeBlockGatherVisitor;
GatherExodusObjectsVisitor< FaceBlock > faceBlockGatherVisitor;
GatherExodusObjectsVisitor< ElementBlock > elementBlockGatherVisitor;
item->traverse( edgeBlockGatherVisitor );
item->traverse( faceBlockGatherVisitor );
item->traverse( elementBlockGatherVisitor );
meshParams.num_edge_blk = edgeBlockGatherVisitor.pointers().size();
meshParams.num_face_blk = faceBlockGatherVisitor.pointers().size();
meshParams.num_elem_blk = elementBlockGatherVisitor.pointers().size();
if ( meshParams.num_edge_blk + meshParams.num_face_blk + meshParams.num_elem_blk < 1 ) {
// There is nothing to write.
return;
}
// There is only one Geometry (one unique set of nodes). To find it, we just need to find
// the first one.
xdmGrid::Geometry* geom;
if ( meshParams.num_edge_blk > 0 ) {
geom = dynamic_cast< Block* >( edgeBlockGatherVisitor.pointers().front() )->geometry().get();
} else if ( meshParams.num_face_blk > 0 ) {
geom = dynamic_cast< Block* >( faceBlockGatherVisitor.pointers().front() )->geometry().get();
} else {
geom = dynamic_cast< Block* >( elementBlockGatherVisitor.pointers().front() )->geometry().get();
}
meshParams.num_dim = geom->dimension();
meshParams.num_nodes = geom->numberOfNodes();
std::vector< void* > geomPtrs( 3, NULL );
for ( std::size_t dim = 0; dim < meshParams.num_dim; ++dim ) {
geomPtrs[ dim ] = geom->child( dim )->data()->array()->data();
}
EXODUS_CALL( ex_put_coord( file.id(), geomPtrs[0], geomPtrs[1], geomPtrs[2] ),
"Unable to write coordinates." );
std::vector< ExodusString > coordNames;
coordNames.push_back( "X" );
coordNames.push_back( "Y" );
coordNames.push_back( "Z" );
char* coordNamesCharArray[ 3 ];
vectorToCharStarArray( coordNames, coordNamesCharArray );
EXODUS_CALL( ex_put_coord_names( file.id(), coordNamesCharArray ),
"Unable to write coordinate names." );
// Count the entries in the blocks.
meshParams.num_edge = edgeBlockGatherVisitor.totalNumberOfEntries();
meshParams.num_face = faceBlockGatherVisitor.totalNumberOfEntries();
meshParams.num_elem = elementBlockGatherVisitor.totalNumberOfEntries();
// Not doing sets and maps at the moment...
meshParams.num_node_sets = 0;
meshParams.num_edge_sets = 0;
meshParams.num_face_sets = 0;
meshParams.num_side_sets = 0;
meshParams.num_elem_sets = 0;
meshParams.num_node_maps = 0;
meshParams.num_edge_maps = 0;
meshParams.num_face_maps = 0;
meshParams.num_elem_maps = 0;
EXODUS_CALL( ex_put_init_ext( file.id(), &meshParams ),
"Unable to initialize database.\n" );
// Write the time step info, if there is any.
FindTimeVisitor timeVisit;
item->traverse( timeVisit );
if ( timeVisit.time() ) {
double timeVal = timeVisit.time()->value();
EXODUS_CALL( ex_put_time( file.id(), (int)( timeStep + 1 ), (void*)&timeVal ),
"Unable to write time value." );
}
// Write the blocks.
writeBlockData(
file.id(),
EX_EDGE_BLOCK,
edgeBlockGatherVisitor.names(),
edgeBlockGatherVisitor.pointers() );
writeBlockData(
file.id(),
EX_FACE_BLOCK,
faceBlockGatherVisitor.names(),
faceBlockGatherVisitor.pointers() );
writeBlockData(
file.id(),
EX_ELEM_BLOCK,
elementBlockGatherVisitor.names(),
elementBlockGatherVisitor.pointers() );
// Write the variable data for this time step.
for ( std::size_t blockIndex = 0; blockIndex < meshParams.num_edge_blk; ++blockIndex ) {
edgeBlockGatherVisitor.pointers()[ blockIndex ]->writeTimeStep( file.id(), timeStep );
}
for ( std::size_t blockIndex = 0; blockIndex < meshParams.num_face_blk; ++blockIndex ) {
faceBlockGatherVisitor.pointers()[ blockIndex ]->writeTimeStep( file.id(), timeStep );
}
for ( std::size_t blockIndex = 0; blockIndex < meshParams.num_elem_blk; ++blockIndex ) {
elementBlockGatherVisitor.pointers()[ blockIndex ]->writeTimeStep( file.id(), timeStep );
}
}
