int CWaitingList::getTableQueueUpdate(int length, char*& buf)
{
pdu_queuedelta data;
memset(&data, 0, sizeof(data));
int numDeltas = 0;
TableList& tableList = getTableList();
for (TableList::iterator ti = tableList.begin(),
te = tableList.end();
ti != te;
++ti)
{
if (length + (numDeltas + 1) * sizeof(pdu_queuedelta) >= MAXBUFFERSIZE)
{
Sys_LogError("CpduQueueUpdate::sendAllTables: buffer size too small!\n");
break;
}
numDeltas++;
data.queueNumber = htons(getQueueNumber());
data.reason = htons(CpduQueueUpdate::QUEUEDELTA_TABLE_ADD);
strncpy(data.name, (*ti).table_->getTitle().c_str(), PDU_STRINGSIZE);
memcpy(buf, &data, sizeof(data));
buf += sizeof(data);
}
return numDeltas;
}
bool CWaitingList::addTable(u_int16_t gameType, CTable* table)
{
bool rc = false;
// As additional checks, make sure the table is
// not in the list already
TableList& tlist = getTableList();
TableList::iterator tpos = find_if(tlist.begin(),
tlist.end(),
same_socket(table->getSocket()));
if (tpos == tlist.end())
{
tpos = find_if(tlist.begin(),
tlist.end(),
same_number(table->getNumber()));
}
if (tpos == tlist.end())
{ // okay its not in the list, add it
tlist.push_back(TablePtr(*table));
rc = true;
}
else
{
char s[128];
sprintf(s, "CLounge: Table is already in waiting list: type %d hi: %d lo: %d",
gameType, table->getLo(), table->getHi());
Sys_LogError(s);
}
return rc;
}
void moveAll(char *srcDb, char* destDb)
/* Rename all gbLoadRna tables from database to another. */
{
struct slName *tables, *tbl;
struct sqlConnection *conn;
struct dyString* sqlCmd = dyStringNew(256);
char *sep;
gbVerbEnter(1, "moveAll");
conn = hAllocConn(srcDb);
gbLockDb(conn, srcDb);
gbLockDb(conn, destDb);
copyChromInfo(conn, destDb);
/* using one does rename atomically */
tables = getTableList(conn);
dyStringAppend(sqlCmd, "rename table");
sep = " "; /* before first table arg */
for (tbl = tables; tbl != NULL; tbl = tbl->next)
{
dyStringPrintf(sqlCmd, "%s%s to %s.%s",
sep,tbl->name, destDb, tbl->name);
sep = ", "; /* before other table arg */
}
sqlUpdate(conn, sqlCmd->string);
dyStringFree(&sqlCmd);
slFreeList(&tables);
gbUnlockDb(conn, destDb);
gbUnlockDb(conn, srcDb);
hFreeConn(&conn);
gbVerbLeave(1, "moveAll");
}
void copyAll(char *srcDb, char* destDb)
/* Copy all gbLoadRna tables from database to another. */
{
struct slName *tables, *tbl;
struct sqlConnection *conn;
gbVerbEnter(1, "copyAll");
conn = hAllocConn(srcDb);
gbLockDb(conn, srcDb);
gbLockDb(conn, destDb);
copyChromInfo(conn, destDb);
/* copy each table */
tables = getTableList(conn);
for (tbl = tables; tbl != NULL; tbl = tbl->next)
{
copyTable(conn, destDb, tbl->name, tbl->name);
}
slFreeList(&tables);
gbUnlockDb(conn, destDb);
gbUnlockDb(conn, srcDb);
hFreeConn(&conn);
gbVerbLeave(1, "copyAll");
}
int main(int argc, char *argv[])
/* work with singly aligning SNPs only */
/* load oldTable subset into list */
/* load newTable subset into hash */
{
char *snpDb = NULL;
struct weightList *oldTableList = NULL;
struct hash *newTableHash = NULL;
char *oldTableName = NULL;
char *newTableName = NULL;
if (argc != 4)
usage();
oneToOne = 0;
oneToTwo = 0;
oneToThree = 0;
twoToTwo = 0;
twoToOne = 0;
twoToThree = 0;
threeToThree = 0;
threeToOne = 0;
threeToTwo = 0;
snpDb = argv[1];
hSetDb(snpDb);
oldTableName = argv[2];
newTableName = argv[3];
// check that tables exist
if (!hTableExists(oldTableName))
errAbort("no %s table in %s\n", oldTableName, snpDb);
if (!hTableExists(newTableName))
errAbort("no %s table in %s\n", newTableName, snpDb);
oldTableList = getTableList(oldTableName);
newTableHash = getTableHash(newTableName);
logFileHandle = mustOpen("snpCompareWeightLog.out", "w");
processSnps(oldTableList, newTableHash);
carefulClose(&logFileHandle);
countFileHandle = mustOpen("snpCompareWeightCounts.out", "w");
fprintf(countFileHandle, "oneToOne = %d\n", oneToOne);
fprintf(countFileHandle, "oneToTwo = %d\n", oneToTwo);
fprintf(countFileHandle, "oneToThree = %d\n", oneToThree);
fprintf(countFileHandle, "twoToTwo = %d\n", twoToTwo);
fprintf(countFileHandle, "twoToOne = %d\n", twoToOne);
fprintf(countFileHandle, "twoToThree = %d\n", twoToThree);
fprintf(countFileHandle, "threeToThree = %d\n", threeToThree);
fprintf(countFileHandle, "threeToOne = %d\n", threeToOne);
fprintf(countFileHandle, "threeToTwo = %d\n", threeToTwo);
carefulClose(&countFileHandle);
return 0;
}
void Schema::resetTablesVertically2()
{
populateSchemaTables();
QList<Table*> table_list = getTableList();
foreach(Table *table, table_list) {
if(mainwin->getSearchBox()->isVisible())
table->getSearchTerm(mainwin->getSearchBox()->text());
table->verticalPosition2();
}
scene()->setSceneRect(QRectF());
}
void Schema::populateSchemaTables()
{
foreach (Table *table, getTableList())
delete table;
this->table_list.clear();
this->setTableCount(0);
QList<Table*> table_list;
QSqlQuery table_query(parent_database->getDatabaseConnection());
QString table_query_string = "SELECT 0, tablename FROM pg_tables WHERE schemaname='"+this->getName()+"' ORDER BY 1,2";
table_query.exec(table_query_string);
setTableCount(table_query.size());
if(table_query.lastError().isValid()) {
QMessageBox *error_message = new QMessageBox(QMessageBox::Critical,
tr("Database error"),
tr("Unable to retrieve schema tables.\n"
"Check your database connection or permissions.\n"),
QMessageBox::Cancel,0,Qt::Dialog);
error_message->setWindowModality(Qt::NonModal);
error_message->show();
return;
}
while (table_query.next()) {
QString table_name = table_query.value(1).toString();
Table *table;
if(table_query.value(0).toInt() == 0) {
table = new Table(parent_database, this, table_name, table_list.size(), QColor(100,50,50));
table->setView(false);
}
else
return;
table->setSearched(true);
if(mainwin->isColumnView())
table->verticalPosition2();
else
table->defaultPosition();
QObject::connect(mainwin->getSearchBox(), SIGNAL(textChanged(QString)), table, SLOT(getSearchTerm(QString)));
QObject::connect(mainwin, SIGNAL(showColumnView()), table, SLOT(verticalPosition2()));
QObject::connect(table, SIGNAL(expandTable(Database *, Schema *, Table*)), mainwin, SLOT(showTableView(Database *, Schema *, Table*)));
QObject::connect(table, SIGNAL(designTable(Database *, Schema *, Table*)), mainwin, SLOT(showDesignView(Database *, Schema *, Table*)));
//QObject::connect(table, SIGNAL(rename(Database *, Schema *, Table*)), mainwin, SLOT(renameTable(Database *, Schema *, Table*)));
QObject::connect(table, SIGNAL(clearTable(Database *, Schema *, Table*)), mainwin, SLOT(clearTableView(Database *, Schema *, Table*)));
QObject::connect(table, SIGNAL(dropTable(Database *, Schema *, Table*)), mainwin, SLOT(dropTable(Database *, Schema *, Table*)));
table_list.append(table);
if(!parent_database->tableNamesList().contains(table_name))
parent_database->appendTableName(table_name);
}
setTableList(table_list);
}
bool CWaitingList::removeTable(int tableNumber)
{
bool rc = false;
TableList& tlist = getTableList();
TableList::iterator tpos = find_if(tlist.begin(),
tlist.end(),
same_number(tableNumber));
if (tpos != tlist.end())
{
rc = true;
tlist.erase(tpos);
}
return rc;
}
void dropAll(char *database)
/* Drop all gbLoadRna tables from database. */
{
struct slName *tables, *tbl;
struct sqlConnection *conn;
gbVerbEnter(1, "dropAll");
conn = hAllocConn(database);
gbLockDb(conn, NULL);
tables = getTableList(conn);
for (tbl = tables; tbl != NULL; tbl = tbl->next)
sqlDropTable(conn, tbl->name);
slFreeList(&tables);
gbUnlockDb(conn, NULL);
hFreeConn(&conn);
gbVerbLeave(1, "dropAll");
}